Long-fingered bat hepatitis B virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Blubervirales; Hepadnaviridae; Orthohepadnavirus

Average proteome isoelectric point is 8.61

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|M4PSV1|M4PSV1_9HEPA External core antigen OS=Long-fingered bat hepatitis B virus OX=2050037 GN=C PE=3 SV=1
MM1 pKa = 6.67GQNWSIPNPLGFLPEE16 pKa = 4.11HH17 pKa = 6.06QLPNPYY23 pKa = 10.64APVYY27 pKa = 10.26QDD29 pKa = 2.8WDD31 pKa = 3.94LNQDD35 pKa = 3.24KK36 pKa = 10.6DD37 pKa = 3.28QWPQARR43 pKa = 11.84EE44 pKa = 4.02VSPGAYY50 pKa = 9.78GLGFVPPHH58 pKa = 6.61GGLTGNLPFAQEE70 pKa = 4.35GNLTSNNPEE79 pKa = 4.08TIVYY83 pKa = 7.86QIPKK87 pKa = 10.37AKK89 pKa = 10.3DD90 pKa = 3.17EE91 pKa = 4.43SQTQVIQLPAPPRR104 pKa = 11.84TTTNRR109 pKa = 11.84KK110 pKa = 9.38KK111 pKa = 10.63GRR113 pKa = 11.84QPTPPTPPVRR123 pKa = 11.84VTHH126 pKa = 6.2PHH128 pKa = 6.5LNMPSWRR135 pKa = 11.84EE136 pKa = 3.88KK137 pKa = 10.16YY138 pKa = 10.45GHH140 pKa = 7.76LITAGGSSSKK150 pKa = 10.71LQIPAVTAASVTSSASSTIGDD171 pKa = 4.15PATDD175 pKa = 3.34MGITTSGFLVPLAGLQVGCFLLTKK199 pKa = 9.8ILEE202 pKa = 4.36IGKK205 pKa = 9.55SLDD208 pKa = 3.21WWWTSLSFPGGIPVCIGQNSQSQTSSHH235 pKa = 6.51SPTSCPPTCTGFRR248 pKa = 11.84WMWLRR253 pKa = 11.84RR254 pKa = 11.84FIIYY258 pKa = 10.48LLVLLLCAIFLLVLLDD274 pKa = 3.37WRR276 pKa = 11.84GFLPVCPLPTSSSTTTRR293 pKa = 11.84CSTCTATATDD303 pKa = 5.72PITWPYY309 pKa = 9.41CCCSKK314 pKa = 9.6PTDD317 pKa = 4.21GNCTCWPIPTSWALGKK333 pKa = 9.6FLWGWASARR342 pKa = 11.84FSWLNSLLPWLLWFAEE358 pKa = 4.29LSPTVWLLLIWMMWFWGPSLLTIFEE383 pKa = 4.43PFIPLCALFFVIWEE397 pKa = 4.24LWW399 pKa = 3.15

Molecular weight: 44.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|M4Q3B7|M4Q3B7_9HEPA Protein X OS=Long-fingered bat hepatitis B virus OX=2050037 GN=X PE=3 SV=1
MM1 pKa = 7.69AARR4 pKa = 11.84LRR6 pKa = 11.84CQLDD10 pKa = 3.04ASGNVVLLRR19 pKa = 11.84PLCIEE24 pKa = 3.86SGGRR28 pKa = 11.84PVARR32 pKa = 11.84SARR35 pKa = 11.84HH36 pKa = 4.68SRR38 pKa = 11.84RR39 pKa = 11.84AAASPVPTVHH49 pKa = 6.48GPHH52 pKa = 4.82VTLRR56 pKa = 11.84RR57 pKa = 11.84LPICAASPAGPCALRR72 pKa = 11.84FTCANFSGCMEE83 pKa = 3.98TTMNFVTWLGTRR95 pKa = 11.84RR96 pKa = 11.84RR97 pKa = 11.84TGAKK101 pKa = 9.76LNSGHH106 pKa = 6.22WDD108 pKa = 3.18MYY110 pKa = 10.64FRR112 pKa = 11.84EE113 pKa = 4.34SLMKK117 pKa = 10.13EE118 pKa = 3.78WEE120 pKa = 4.29EE121 pKa = 4.01KK122 pKa = 11.29GNDD125 pKa = 3.25QRR127 pKa = 11.84LYY129 pKa = 8.51TYY131 pKa = 10.93VSGGCRR137 pKa = 11.84HH138 pKa = 6.57KK139 pKa = 10.92LLCTLL144 pKa = 4.45

Molecular weight: 15.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1613

144

853

403.3

45.13

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.448 ± 0.547

3.038 ± 0.522

2.914 ± 0.186

2.976 ± 0.651

4.278 ± 0.204

6.696 ± 0.515

3.658 ± 0.948

3.968 ± 0.526

3.472 ± 0.94

11.903 ± 0.448

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.674 ± 0.244

3.472 ± 0.325

9.423 ± 0.769

3.658 ± 0.369

6.696 ± 1.559

8.555 ± 0.24

6.944 ± 1.149

4.65 ± 0.158

3.348 ± 0.903

2.232 ± 0.251
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski