Bat circovirus POA/2012/VI

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; Cyclovirus; Bat associated cyclovirus 10

Average proteome isoelectric point is 9.17

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A0YUE0|A0A0A0YUE0_9CIRC Capsid OS=Bat circovirus POA/2012/VI OX=1572239 GN=Cap PE=4 SV=1
MM1 pKa = 7.62AFRR4 pKa = 11.84RR5 pKa = 11.84FRR7 pKa = 11.84RR8 pKa = 11.84WRR10 pKa = 11.84RR11 pKa = 11.84MPLRR15 pKa = 11.84RR16 pKa = 11.84NRR18 pKa = 11.84FRR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84IFRR25 pKa = 11.84HH26 pKa = 4.88RR27 pKa = 11.84LRR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84VVRR34 pKa = 11.84RR35 pKa = 11.84TPTLYY40 pKa = 10.89VKK42 pKa = 9.38LTRR45 pKa = 11.84TIQIAIPPSVEE56 pKa = 3.96FNQPLHH62 pKa = 6.64VSLNDD67 pKa = 3.48FAEE70 pKa = 5.04HH71 pKa = 6.88INLAPNFEE79 pKa = 4.3RR80 pKa = 11.84VKK82 pKa = 10.84ALRR85 pKa = 11.84QTVRR89 pKa = 11.84VYY91 pKa = 10.06PQQNVSNTSTSRR103 pKa = 11.84VGNYY107 pKa = 10.15CMLPYY112 pKa = 10.0HH113 pKa = 6.51KK114 pKa = 9.68PVPTSLINFPTALSVDD130 pKa = 3.25KK131 pKa = 11.18AKK133 pKa = 10.75VFRR136 pKa = 11.84CTQKK140 pKa = 10.55GRR142 pKa = 11.84MSFVPATRR150 pKa = 11.84LDD152 pKa = 3.59ADD154 pKa = 3.94GVGGNQTIRR163 pKa = 11.84TDD165 pKa = 3.05WRR167 pKa = 11.84PEE169 pKa = 3.81LEE171 pKa = 4.32IGSTATNVIMYY182 pKa = 8.82TGMIVFEE189 pKa = 4.92NINAGLTGTTAYY201 pKa = 8.76YY202 pKa = 9.95TVVQDD207 pKa = 4.33LYY209 pKa = 11.69VRR211 pKa = 11.84YY212 pKa = 9.71KK213 pKa = 9.84NQRR216 pKa = 11.84SFII219 pKa = 4.23

Molecular weight: 25.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A0YUE0|A0A0A0YUE0_9CIRC Capsid OS=Bat circovirus POA/2012/VI OX=1572239 GN=Cap PE=4 SV=1
MM1 pKa = 7.38SNSTVRR7 pKa = 11.84RR8 pKa = 11.84FCFTWNNYY16 pKa = 7.15TVADD20 pKa = 4.1TLTVKK25 pKa = 10.69DD26 pKa = 6.02FFIQHH31 pKa = 6.26CKK33 pKa = 10.2YY34 pKa = 10.51GIAGEE39 pKa = 4.53EE40 pKa = 3.96IAPTTGTPHH49 pKa = 6.23LQGFANLSKK58 pKa = 10.6PMRR61 pKa = 11.84FSTIKK66 pKa = 10.06KK67 pKa = 8.07HH68 pKa = 5.0LHH70 pKa = 5.39NGIHH74 pKa = 6.11IEE76 pKa = 4.0KK77 pKa = 10.66ANGSDD82 pKa = 3.6EE83 pKa = 4.48QNQAYY88 pKa = 9.27CKK90 pKa = 10.51KK91 pKa = 9.91SGTWFEE97 pKa = 4.06QGTPCSQGSRR107 pKa = 11.84SDD109 pKa = 3.53LADD112 pKa = 3.38VVSAIQNGTNTTQAIAQLYY131 pKa = 7.72PIAYY135 pKa = 7.69IKK137 pKa = 10.26YY138 pKa = 7.88YY139 pKa = 10.66KK140 pKa = 10.33GINEE144 pKa = 4.05YY145 pKa = 11.01LKK147 pKa = 9.42IQHH150 pKa = 7.19PITPRR155 pKa = 11.84RR156 pKa = 11.84HH157 pKa = 5.04KK158 pKa = 9.46TWVYY162 pKa = 9.69YY163 pKa = 9.85YY164 pKa = 9.15WGPPGTGKK172 pKa = 10.03SRR174 pKa = 11.84RR175 pKa = 11.84ALKK178 pKa = 10.01KK179 pKa = 10.4RR180 pKa = 11.84RR181 pKa = 11.84VSTQKK186 pKa = 10.48VSTTSQGACGGTDD199 pKa = 3.19TSNKK203 pKa = 7.89RR204 pKa = 11.84TSSSTTSTGGSNTTNYY220 pKa = 10.79SKK222 pKa = 11.34LLTDD226 pKa = 4.0TLTKK230 pKa = 10.8YY231 pKa = 10.43KK232 pKa = 10.85

Molecular weight: 25.89 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

451

219

232

225.5

25.79

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.543 ± 0.043

1.552 ± 0.435

2.882 ± 0.097

2.661 ± 0.054

4.213 ± 0.862

6.208 ± 1.429

2.439 ± 0.417

5.543 ± 0.043

5.987 ± 1.899

5.765 ± 0.738

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.774 ± 0.657

5.987 ± 0.276

4.878 ± 0.72

4.656 ± 0.372

9.313 ± 3.296

6.874 ± 1.571

11.308 ± 1.481

6.208 ± 1.99

1.33 ± 0.284

4.878 ± 0.523
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski