Blautia sp. An249
Average proteome isoelectric point is 6.21
Get precalculated fractions of proteins
Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
All
Note: above files contain also dissociation constants (pKa)
Virtual 2D-PAGE plot for 3735 proteins (isoelectric point calculated using IPC2_protein)
Get csv file with sequences according to given criteria:
* You can choose from 21 different methods for calculating isoelectric point
Summary statistics related to proteome-wise predictions
Protein with the lowest isoelectric point:
>tr|A0A1Y4F6F3|A0A1Y4F6F3_9FIRM TM1586_NiRdase domain-containing protein OS=Blautia sp. An249 OX=1965603 GN=B5F53_09470 PE=4 SV=1
MM1 pKa = 7.42 SRR3 pKa = 11.84 KK4 pKa = 9.38 HH5 pKa = 6.18 KK6 pKa = 10.74 NLVILATVLSAACIFSACGKK26 pKa = 10.06 DD27 pKa = 4.04 KK28 pKa = 10.91 EE29 pKa = 4.48 DD30 pKa = 3.36 QVVVAEE36 pKa = 4.94 APTPTPTVAPTITPVPSVAATAQKK60 pKa = 8.9 VTYY63 pKa = 8.48 TSKK66 pKa = 10.81 DD67 pKa = 3.35 SSVSIVLPDD76 pKa = 3.66 NTWKK80 pKa = 8.81 NTSDD84 pKa = 3.3 NGKK87 pKa = 10.49 SIIFNSDD94 pKa = 2.66 TQGNISITYY103 pKa = 10.1 ANTDD107 pKa = 2.92 ADD109 pKa = 4.17 LAKK112 pKa = 10.81 VQIPSSKK119 pKa = 9.94 EE120 pKa = 3.42 LAGSITAGTSLTEE133 pKa = 4.06 GTDD136 pKa = 4.15 FDD138 pKa = 4.14 ILDD141 pKa = 3.74 YY142 pKa = 10.51 TATEE146 pKa = 3.87 MDD148 pKa = 3.43 GVDD151 pKa = 3.27 VYY153 pKa = 11.18 RR154 pKa = 11.84 YY155 pKa = 6.55 TVKK158 pKa = 10.76 AADD161 pKa = 3.47 ASKK164 pKa = 9.96 MNGYY168 pKa = 10.79 AYY170 pKa = 9.76 IEE172 pKa = 4.2 NYY174 pKa = 10.34 YY175 pKa = 9.21 LTDD178 pKa = 3.67 GSEE181 pKa = 4.69 LYY183 pKa = 10.52 QISGSLKK190 pKa = 10.28 LQDD193 pKa = 3.69 PTSLNTMKK201 pKa = 10.62 EE202 pKa = 3.96 AVTSFRR208 pKa = 11.84 ILKK211 pKa = 10.1 ADD213 pKa = 3.79 SPLKK217 pKa = 10.61 AAADD221 pKa = 4.47 TIASQNSSSATPSVTPSVTPAASGDD246 pKa = 3.79 SDD248 pKa = 4.52 NSDD251 pKa = 3.52 SSDD254 pKa = 4.11 DD255 pKa = 3.78 SDD257 pKa = 4.25 TNTSSTSDD265 pKa = 3.3 GSSSDD270 pKa = 2.98 SSYY273 pKa = 11.77 DD274 pKa = 3.63 DD275 pKa = 4.03 SSSSGDD281 pKa = 3.47 DD282 pKa = 3.3 SGSGNSGQSSEE293 pKa = 4.71 DD294 pKa = 2.71 GWYY297 pKa = 10.42 DD298 pKa = 3.18 GDD300 pKa = 4.06 TFISYY305 pKa = 11.09 DD306 pKa = 3.82 DD307 pKa = 5.31 GYY309 pKa = 11.46 FDD311 pKa = 6.73 DD312 pKa = 5.4 DD313 pKa = 6.31 GYY315 pKa = 9.33 WHH317 pKa = 7.73 WYY319 pKa = 9.76 GDD321 pKa = 3.81 DD322 pKa = 3.96 SGDD325 pKa = 5.07 DD326 pKa = 3.74 GSGDD330 pKa = 4.06 DD331 pKa = 4.76 GSDD334 pKa = 4.28 DD335 pKa = 3.87 GSSDD339 pKa = 4.85 DD340 pKa = 4.73 GSGDD344 pKa = 3.95 DD345 pKa = 5.63 GSGSDD350 pKa = 4.92 DD351 pKa = 4.49 GGWYY355 pKa = 10.01 DD356 pKa = 3.78 NNGNYY361 pKa = 9.72 FSYY364 pKa = 11.35 NDD366 pKa = 4.75 GYY368 pKa = 11.39 FDD370 pKa = 6.87 DD371 pKa = 5.77 DD372 pKa = 6.31 GVWQWYY378 pKa = 8.98
Molecular weight: 39.83 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 3.713
IPC2_protein 3.528
IPC_protein 3.605
Toseland 3.35
ProMoST 3.795
Dawson 3.617
Bjellqvist 3.77
Wikipedia 3.605
Rodwell 3.414
Grimsley 3.249
Solomon 3.617
Lehninger 3.579
Nozaki 3.732
DTASelect 4.075
Thurlkill 3.414
EMBOSS 3.605
Sillero 3.732
Patrickios 0.858
IPC_peptide 3.605
IPC2_peptide 3.694
IPC2.peptide.svr19 3.681
Protein with the highest isoelectric point:
>tr|A0A1Y4F598|A0A1Y4F598_9FIRM Inosine monophosphate cyclohydrolase OS=Blautia sp. An249 OX=1965603 GN=B5F53_09430 PE=4 SV=1
MM1 pKa = 7.67 KK2 pKa = 8.72 MTFQPKK8 pKa = 8.95 KK9 pKa = 7.58 RR10 pKa = 11.84 QRR12 pKa = 11.84 SKK14 pKa = 9.17 VHH16 pKa = 5.94 GFRR19 pKa = 11.84 ARR21 pKa = 11.84 MKK23 pKa = 8.89 TKK25 pKa = 10.34 GGRR28 pKa = 11.84 KK29 pKa = 8.67 VLAARR34 pKa = 11.84 RR35 pKa = 11.84 LKK37 pKa = 10.68 GRR39 pKa = 11.84 KK40 pKa = 8.28 QLSAA44 pKa = 3.9
Molecular weight: 5.15 kDa
Isoelectric point according different methods:
IPC2.protein.svr19 9.494
IPC2_protein 11.125
IPC_protein 12.691
Toseland 12.866
ProMoST 13.349
Dawson 12.866
Bjellqvist 12.852
Wikipedia 13.334
Rodwell 12.705
Grimsley 12.91
Solomon 13.349
Lehninger 13.247
Nozaki 12.866
DTASelect 12.852
Thurlkill 12.866
EMBOSS 13.364
Sillero 12.866
Patrickios 12.427
IPC_peptide 13.349
IPC2_peptide 12.34
IPC2.peptide.svr19 9.077
Peptides (in silico digests for buttom-up proteomics)
Below you can find
in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.
Try ESI
ChTry ESI
ArgC ESI
LysN ESI
TryLysC ESI
Try MALDI
ChTry MALDI
ArgC MALDI
LysN MALDI
TryLysC MALDI
Try LTQ
ChTry LTQ
ArgC LTQ
LysN LTQ
TryLysC LTQ
Try MSlow
ChTry MSlow
ArgC MSlow
LysN MSlow
TryLysC MSlow
Try MShigh
ChTry MShigh
ArgC MShigh
LysN MShigh
TryLysC MShigh
General Statistics
Number of major isoforms
Number of additional isoforms
Number of all proteins
Number of amino acids
Min. Seq. Length
Max. Seq. Length
Avg. Seq. Length
Avg. Mol. Weight
3735
0
3735
1167479
37
3650
312.6
35.13
Amino acid frequency
Ala
Cys
Asp
Glu
Phe
Gly
His
Ile
Lys
Leu
7.321 ± 0.044
1.516 ± 0.018
5.229 ± 0.037
8.243 ± 0.045
4.037 ± 0.026
7.262 ± 0.038
1.673 ± 0.016
7.037 ± 0.038
6.852 ± 0.039
9.16 ± 0.051
Met
Asn
Gln
Pro
Arg
Ser
Thr
Val
Trp
Tyr
2.99 ± 0.022
3.987 ± 0.025
3.409 ± 0.022
3.654 ± 0.021
4.639 ± 0.03
5.824 ± 0.038
5.426 ± 0.039
6.638 ± 0.036
0.971 ± 0.014
4.132 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level
Most of the basic statistics you can see at this page can be downloaded from this CSV file
For dipeptide frequency statistics click here