Aeriscardovia aeriphila

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Bifidobacteriales; Bifidobacteriaceae; Aeriscardovia

Average proteome isoelectric point is 6.32

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1287 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A261FC38|A0A261FC38_9BIFI DNA-binding protein OS=Aeriscardovia aeriphila OX=218139 GN=AEAE_0016 PE=4 SV=1
MM1 pKa = 7.61PLHH4 pKa = 5.42YY5 pKa = 9.71TSVADD10 pKa = 5.69AGIQPINLAQMRR22 pKa = 11.84QDD24 pKa = 3.02VHH26 pKa = 8.79LDD28 pKa = 3.5FTHH31 pKa = 7.03AACLLSVEE39 pKa = 4.42PEE41 pKa = 4.05VVEE44 pKa = 3.85RR45 pKa = 11.84WEE47 pKa = 4.25RR48 pKa = 11.84NLEE51 pKa = 4.03VLPVAVYY58 pKa = 9.99KK59 pKa = 10.74KK60 pKa = 10.63YY61 pKa = 10.94VATLEE66 pKa = 4.18KK67 pKa = 10.38AGRR70 pKa = 11.84IYY72 pKa = 10.68QQDD75 pKa = 3.72PDD77 pKa = 4.01NLIFTIDD84 pKa = 3.7LASLDD89 pKa = 4.2RR90 pKa = 11.84LDD92 pKa = 5.53HH93 pKa = 6.32PMTYY97 pKa = 9.03TACTEE102 pKa = 4.19EE103 pKa = 4.39YY104 pKa = 10.51VEE106 pKa = 4.34QVLALGVDD114 pKa = 4.49FPEE117 pKa = 5.22DD118 pKa = 3.53FWPYY122 pKa = 10.46EE123 pKa = 4.08FVPEE127 pKa = 3.97YY128 pKa = 10.33PIVLRR133 pKa = 11.84EE134 pKa = 3.9QIAYY138 pKa = 5.6EE139 pKa = 4.13TEE141 pKa = 4.54GIEE144 pKa = 4.2PYY146 pKa = 10.35PGFGEE151 pKa = 3.94AWEE154 pKa = 4.37TFQDD158 pKa = 3.81NLDD161 pKa = 3.79EE162 pKa = 4.42VDD164 pKa = 4.65SIVHH168 pKa = 6.43QILADD173 pKa = 3.42QGGKK177 pKa = 9.22VLYY180 pKa = 10.6DD181 pKa = 3.81DD182 pKa = 5.28DD183 pKa = 6.54DD184 pKa = 5.21YY185 pKa = 12.07YY186 pKa = 11.63GYY188 pKa = 10.86DD189 pKa = 4.07LPDD192 pKa = 3.45GVNFEE197 pKa = 4.36GDD199 pKa = 3.74SVALADD205 pKa = 5.05LARR208 pKa = 11.84EE209 pKa = 4.12NNTFDD214 pKa = 5.45DD215 pKa = 5.58DD216 pKa = 4.47STFDD220 pKa = 5.88DD221 pKa = 5.46DD222 pKa = 6.61DD223 pKa = 6.11FDD225 pKa = 6.61DD226 pKa = 5.83GSTFNDD232 pKa = 3.89GDD234 pKa = 3.94FEE236 pKa = 4.69DD237 pKa = 6.02ANDD240 pKa = 4.06ADD242 pKa = 4.97DD243 pKa = 5.82DD244 pKa = 4.49FSEE247 pKa = 5.22SYY249 pKa = 10.74TDD251 pKa = 4.6ANFADD256 pKa = 5.51FAARR260 pKa = 11.84LSQFSSGQEE269 pKa = 3.66DD270 pKa = 4.25GAPSLRR276 pKa = 11.84YY277 pKa = 10.12DD278 pKa = 3.04NGAIHH283 pKa = 6.73FEE285 pKa = 4.32VVDD288 pKa = 4.48LDD290 pKa = 3.78AGKK293 pKa = 10.18DD294 pKa = 3.27ADD296 pKa = 4.13TQTDD300 pKa = 3.32TGATRR305 pKa = 11.84SAALDD310 pKa = 3.67ADD312 pKa = 4.28TNADD316 pKa = 3.33AVTSANVNANAEE328 pKa = 4.26ANPIPITSARR338 pKa = 11.84IQRR341 pKa = 11.84GDD343 pKa = 3.21GSLSASHH350 pKa = 5.93STPPSEE356 pKa = 4.41

Molecular weight: 39.31 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A261F7X0|A0A261F7X0_9BIFI Ammonium transporter OS=Aeriscardovia aeriphila OX=218139 GN=AEAE_1215 PE=4 SV=1
MM1 pKa = 7.44KK2 pKa = 9.6RR3 pKa = 11.84TFQPNNRR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84HH13 pKa = 4.8MKK15 pKa = 9.45HH16 pKa = 5.74GFRR19 pKa = 11.84EE20 pKa = 4.06RR21 pKa = 11.84MRR23 pKa = 11.84TRR25 pKa = 11.84SGRR28 pKa = 11.84ALINRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.79GRR39 pKa = 11.84KK40 pKa = 8.67VLSAA44 pKa = 4.05

Molecular weight: 5.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1287

0

1287

474780

29

1774

368.9

40.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.335 ± 0.074

0.748 ± 0.02

5.905 ± 0.066

5.952 ± 0.068

3.519 ± 0.045

6.982 ± 0.061

2.45 ± 0.033

5.083 ± 0.056

4.327 ± 0.068

9.204 ± 0.071

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.42 ± 0.031

3.699 ± 0.047

4.604 ± 0.051

4.629 ± 0.059

5.573 ± 0.068

7.195 ± 0.072

5.897 ± 0.054

7.381 ± 0.061

1.406 ± 0.026

2.69 ± 0.038
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski