Salinibacterium hongtaonis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Microbacteriaceae; Salinibacterium

Average proteome isoelectric point is 5.94

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2605 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2U1T384|A0A2U1T384_9MICO MaoC family dehydratase OS=Salinibacterium hongtaonis OX=2079791 GN=DF220_11145 PE=3 SV=1
MM1 pKa = 7.39SRR3 pKa = 11.84LRR5 pKa = 11.84RR6 pKa = 11.84SAVALVAIIPLLLSGCFLIGGEE28 pKa = 4.35SRR30 pKa = 11.84TTSTPTGEE38 pKa = 4.66KK39 pKa = 10.13VDD41 pKa = 4.62GDD43 pKa = 3.92LQPFYY48 pKa = 10.87DD49 pKa = 4.98QVVEE53 pKa = 4.2WEE55 pKa = 4.23SCGDD59 pKa = 3.77DD60 pKa = 4.03FQCATAMAPLDD71 pKa = 3.41WDD73 pKa = 3.7DD74 pKa = 4.54PEE76 pKa = 5.85RR77 pKa = 11.84EE78 pKa = 4.32SIEE81 pKa = 3.93LALIRR86 pKa = 11.84LTTRR90 pKa = 11.84GTPMGSLLVNPGGPGGSGVDD110 pKa = 4.19FVRR113 pKa = 11.84EE114 pKa = 3.87SWDD117 pKa = 3.5YY118 pKa = 11.1ATTAQLRR125 pKa = 11.84DD126 pKa = 3.51NYY128 pKa = 10.86DD129 pKa = 3.12LVGFDD134 pKa = 3.8PRR136 pKa = 11.84GVGASSAVSCYY147 pKa = 10.5DD148 pKa = 4.78DD149 pKa = 4.91PDD151 pKa = 3.8TYY153 pKa = 11.37TDD155 pKa = 3.67YY156 pKa = 11.29LYY158 pKa = 10.38DD159 pKa = 3.75ITPGTPGSAEE169 pKa = 3.85WLDD172 pKa = 4.37AMDD175 pKa = 3.18ATMAEE180 pKa = 4.69FGADD184 pKa = 3.1CLEE187 pKa = 4.23FTGEE191 pKa = 4.01LLGFVDD197 pKa = 4.4TVSAARR203 pKa = 11.84DD204 pKa = 3.5LDD206 pKa = 3.97LLRR209 pKa = 11.84AILGDD214 pKa = 3.96DD215 pKa = 3.26KK216 pKa = 11.65LNYY219 pKa = 9.89LGSSYY224 pKa = 10.26GTFLGATYY232 pKa = 11.2ADD234 pKa = 5.52LYY236 pKa = 9.1PQNTGRR242 pKa = 11.84LVLDD246 pKa = 4.16GAIDD250 pKa = 3.72PASTDD255 pKa = 3.95FEE257 pKa = 4.62VTAMQAQGFEE267 pKa = 4.4SAMRR271 pKa = 11.84AYY273 pKa = 10.62LADD276 pKa = 4.14CLTGANCPFTGTVEE290 pKa = 4.4SGMKK294 pKa = 10.22EE295 pKa = 3.47MGAIFARR302 pKa = 11.84LEE304 pKa = 4.07ASPLRR309 pKa = 11.84AEE311 pKa = 4.91DD312 pKa = 3.61GRR314 pKa = 11.84LLGSQTMFTAVILPLYY330 pKa = 10.52SADD333 pKa = 2.59TWQYY337 pKa = 8.61LTSLITDD344 pKa = 3.92VKK346 pKa = 10.54RR347 pKa = 11.84GSAEE351 pKa = 3.8IAFSLADD358 pKa = 4.32LYY360 pKa = 11.34NGRR363 pKa = 11.84EE364 pKa = 4.04PDD366 pKa = 3.24GTFADD371 pKa = 3.87NSSEE375 pKa = 3.94AFTAINCLDD384 pKa = 3.85YY385 pKa = 10.83PSTSTRR391 pKa = 11.84EE392 pKa = 4.01TLPAEE397 pKa = 4.34AAEE400 pKa = 4.36LAALAPVFGPQMSWGGTSCDD420 pKa = 2.99AWPFEE425 pKa = 4.32ATRR428 pKa = 11.84VRR430 pKa = 11.84GPIAADD436 pKa = 4.19GSAPILVVGTTNDD449 pKa = 3.6PATPYY454 pKa = 10.0AWSVALADD462 pKa = 3.79QLQNGHH468 pKa = 6.31LVSYY472 pKa = 10.42DD473 pKa = 3.83GEE475 pKa = 4.3GHH477 pKa = 5.16TAYY480 pKa = 10.61NKK482 pKa = 10.43SNQCIDD488 pKa = 3.58DD489 pKa = 3.81TVDD492 pKa = 3.24AFFIDD497 pKa = 3.93GTVPATDD504 pKa = 4.05PLCC507 pKa = 4.35

Molecular weight: 54.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2U1T2F2|A0A2U1T2F2_9MICO Maltose ABC transporter permease OS=Salinibacterium hongtaonis OX=2079791 GN=DF220_09710 PE=3 SV=1
MM1 pKa = 7.4GSVIKK6 pKa = 10.42KK7 pKa = 8.47RR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.22RR11 pKa = 11.84MAKK14 pKa = 9.41KK15 pKa = 9.87KK16 pKa = 9.7HH17 pKa = 5.84RR18 pKa = 11.84KK19 pKa = 8.56LLRR22 pKa = 11.84KK23 pKa = 7.78TRR25 pKa = 11.84HH26 pKa = 3.65QRR28 pKa = 11.84RR29 pKa = 11.84NKK31 pKa = 9.78KK32 pKa = 9.85

Molecular weight: 4.08 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2605

0

2605

856357

24

9317

328.7

35.12

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.003 ± 0.083

0.483 ± 0.01

5.855 ± 0.041

5.723 ± 0.049

3.241 ± 0.037

8.752 ± 0.059

1.907 ± 0.022

5.145 ± 0.033

2.257 ± 0.036

9.997 ± 0.068

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.927 ± 0.025

2.277 ± 0.029

5.104 ± 0.041

2.842 ± 0.026

6.619 ± 0.062

6.453 ± 0.045

6.142 ± 0.079

8.923 ± 0.042

1.369 ± 0.021

1.981 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski