Eupatorium yellow vein betasatellite

Taxonomy: Viruses; Tolecusatellitidae; Betasatellite

Average proteome isoelectric point is 4.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 1 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q8AYW8|Q8AYW8_9VIRU Putative C1 protein OS=Eupatorium yellow vein betasatellite OX=221054 GN=C1 PE=4 SV=1
MM1 pKa = 7.72TITYY5 pKa = 10.55NNGWGLKK12 pKa = 9.87FIIDD16 pKa = 3.62VRR18 pKa = 11.84LQPTLRR24 pKa = 11.84VMVKK28 pKa = 9.9VFSTNQPVMSCYY40 pKa = 10.79NCTIPYY46 pKa = 8.77TYY48 pKa = 11.14VEE50 pKa = 4.29IQPPFDD56 pKa = 4.05FNGTEE61 pKa = 3.84EE62 pKa = 4.56AIKK65 pKa = 10.86NRR67 pKa = 11.84LEE69 pKa = 3.8VMYY72 pKa = 10.39RR73 pKa = 11.84EE74 pKa = 4.32SNIFDD79 pKa = 3.89FKK81 pKa = 11.0EE82 pKa = 3.9EE83 pKa = 4.03EE84 pKa = 4.09MLDD87 pKa = 3.98TIDD90 pKa = 6.45DD91 pKa = 4.06LMLDD95 pKa = 4.17TFNHH99 pKa = 6.16IGIDD103 pKa = 3.72TLGHH107 pKa = 5.6CFIRR111 pKa = 11.84CKK113 pKa = 10.66YY114 pKa = 10.24AVV116 pKa = 3.22

Molecular weight: 13.64 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q8AYW8|Q8AYW8_9VIRU Putative C1 protein OS=Eupatorium yellow vein betasatellite OX=221054 GN=C1 PE=4 SV=1
MM1 pKa = 7.72TITYY5 pKa = 10.55NNGWGLKK12 pKa = 9.87FIIDD16 pKa = 3.62VRR18 pKa = 11.84LQPTLRR24 pKa = 11.84VMVKK28 pKa = 9.9VFSTNQPVMSCYY40 pKa = 10.79NCTIPYY46 pKa = 8.77TYY48 pKa = 11.14VEE50 pKa = 4.29IQPPFDD56 pKa = 4.05FNGTEE61 pKa = 3.84EE62 pKa = 4.56AIKK65 pKa = 10.86NRR67 pKa = 11.84LEE69 pKa = 3.8VMYY72 pKa = 10.39RR73 pKa = 11.84EE74 pKa = 4.32SNIFDD79 pKa = 3.89FKK81 pKa = 11.0EE82 pKa = 3.9EE83 pKa = 4.03EE84 pKa = 4.09MLDD87 pKa = 3.98TIDD90 pKa = 6.45DD91 pKa = 4.06LMLDD95 pKa = 4.17TFNHH99 pKa = 6.16IGIDD103 pKa = 3.72TLGHH107 pKa = 5.6CFIRR111 pKa = 11.84CKK113 pKa = 10.66YY114 pKa = 10.24AVV116 pKa = 3.22

Molecular weight: 13.64 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

1

0

1

116

116

116

116.0

13.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

1.724 ± 0.0

3.448 ± 0.0

6.897 ± 0.0

6.897 ± 0.0

6.897 ± 0.0

4.31 ± 0.0

1.724 ± 0.0

9.483 ± 0.0

4.31 ± 0.0

6.897 ± 0.0

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

5.172 ± 0.0

6.897 ± 0.0

4.31 ± 0.0

2.586 ± 0.0

4.31 ± 0.0

2.586 ± 0.0

8.621 ± 0.0

6.897 ± 0.0

0.862 ± 0.0

5.172 ± 0.0
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski