Salmonella phage FSL SP-031

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Guernseyvirinae; Cornellvirus; Salmonella virus SP31

Average proteome isoelectric point is 6.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 59 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|S4TNM5|S4TNM5_9CAUD Uncharacterized protein OS=Salmonella phage FSL SP-031 OX=1173749 GN=SP031_00240 PE=4 SV=1
MM1 pKa = 7.42VDD3 pKa = 3.55VIKK6 pKa = 10.78RR7 pKa = 11.84RR8 pKa = 11.84TTGVDD13 pKa = 3.19DD14 pKa = 5.49ANDD17 pKa = 4.08DD18 pKa = 3.98GQVEE22 pKa = 4.26IVMEE26 pKa = 4.74NISPASFSTGIPDD39 pKa = 3.71TTAVTAPAALTLTVAATGGLAPYY62 pKa = 9.94SYY64 pKa = 11.1QWFKK68 pKa = 11.35NGNAISGATAATYY81 pKa = 8.49TKK83 pKa = 9.27TPTVAGTDD91 pKa = 3.06SGTYY95 pKa = 9.68KK96 pKa = 10.73VVVQDD101 pKa = 3.89GYY103 pKa = 12.04GNIISDD109 pKa = 3.91STVVTVSS116 pKa = 2.88

Molecular weight: 11.88 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|S4TTS8|S4TTS8_9CAUD Uncharacterized protein OS=Salmonella phage FSL SP-031 OX=1173749 GN=SP031_00130 PE=4 SV=1
MM1 pKa = 7.52SLATDD6 pKa = 3.38ILKK9 pKa = 10.37RR10 pKa = 11.84ANSDD14 pKa = 3.34LSPPSKK20 pKa = 10.44SIRR23 pKa = 11.84ADD25 pKa = 3.47YY26 pKa = 9.97MGLAIRR32 pKa = 11.84KK33 pKa = 7.19KK34 pKa = 10.47AKK36 pKa = 9.65RR37 pKa = 11.84AAPKK41 pKa = 10.45GPRR44 pKa = 11.84LNRR47 pKa = 11.84KK48 pKa = 8.77KK49 pKa = 10.85GKK51 pKa = 4.96TVKK54 pKa = 10.37YY55 pKa = 8.54VAPEE59 pKa = 4.07HH60 pKa = 5.7EE61 pKa = 4.67HH62 pKa = 5.25VAGVAFNSRR71 pKa = 11.84NNTWDD76 pKa = 3.12AYY78 pKa = 10.49FYY80 pKa = 11.23NGVKK84 pKa = 9.82TIRR87 pKa = 11.84IGMFHH92 pKa = 5.74TQARR96 pKa = 11.84AIIARR101 pKa = 11.84RR102 pKa = 11.84IYY104 pKa = 9.65MYY106 pKa = 9.49WRR108 pKa = 11.84KK109 pKa = 10.11CGFDD113 pKa = 3.89NIPNKK118 pKa = 9.56PEE120 pKa = 3.47RR121 pKa = 11.84RR122 pKa = 11.84LYY124 pKa = 10.15TMRR127 pKa = 11.84NYY129 pKa = 10.69SDD131 pKa = 3.46KK132 pKa = 11.39SS133 pKa = 3.41

Molecular weight: 15.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

59

0

59

12581

57

824

213.2

23.58

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.952 ± 0.521

1.168 ± 0.138

6.279 ± 0.263

6.383 ± 0.358

3.513 ± 0.18

7.718 ± 0.244

1.685 ± 0.168

5.151 ± 0.179

5.922 ± 0.331

7.551 ± 0.352

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.591 ± 0.144

4.833 ± 0.243

3.799 ± 0.194

4.038 ± 0.334

5.357 ± 0.223

5.747 ± 0.359

6.581 ± 0.432

6.844 ± 0.285

1.518 ± 0.186

3.37 ± 0.198
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski