Capybara microvirus Cap1_SP_61

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 6.15

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W3X3|A0A4P8W3X3_9VIRU Uncharacterized protein OS=Capybara microvirus Cap1_SP_61 OX=2584786 PE=4 SV=1
MM1 pKa = 7.93RR2 pKa = 11.84FTNNFVFAHH11 pKa = 5.57PVFLNSNNTPTAQGASLTPAQIAKK35 pKa = 9.06ATMEE39 pKa = 5.21GIPISPQGLSTEE51 pKa = 4.46QYY53 pKa = 10.75FEE55 pKa = 4.92GNTGDD60 pKa = 3.45SMYY63 pKa = 10.34IAPQFMRR70 pKa = 11.84GVDD73 pKa = 5.52LNDD76 pKa = 2.93AWNIVQDD83 pKa = 3.82NKK85 pKa = 11.18KK86 pKa = 10.32SFNSLTISEE95 pKa = 4.77NGNDD99 pKa = 3.36

Molecular weight: 10.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4V1FVM8|A0A4V1FVM8_9VIRU Replication initiator protein OS=Capybara microvirus Cap1_SP_61 OX=2584786 PE=4 SV=1
MM1 pKa = 7.47ICLSPKK7 pKa = 9.58YY8 pKa = 9.8SLNYY12 pKa = 9.79RR13 pKa = 11.84ILGKK17 pKa = 10.3IMPNIVGYY25 pKa = 10.21SIEE28 pKa = 4.07NQVYY32 pKa = 7.41FTKK35 pKa = 10.39PSYY38 pKa = 10.58RR39 pKa = 11.84SLQCALDD46 pKa = 3.77DD47 pKa = 5.11LIAFGSSSYY56 pKa = 10.7KK57 pKa = 10.62VLVTGYY63 pKa = 10.32YY64 pKa = 10.52DD65 pKa = 3.49GLSVVNYY72 pKa = 8.22PVSPFIVTPCGHH84 pKa = 6.85CASCLKK90 pKa = 10.64AKK92 pKa = 9.96QLNKK96 pKa = 6.35TTCMQLEE103 pKa = 4.3ALNYY107 pKa = 7.95RR108 pKa = 11.84QPLFVTLTYY117 pKa = 10.85ADD119 pKa = 4.45EE120 pKa = 4.82PPSGVNVKK128 pKa = 10.16DD129 pKa = 3.35VQNFLKK135 pKa = 10.64RR136 pKa = 11.84LRR138 pKa = 11.84TNLKK142 pKa = 9.73RR143 pKa = 11.84KK144 pKa = 10.23GYY146 pKa = 9.64DD147 pKa = 2.98EE148 pKa = 5.53PIRR151 pKa = 11.84YY152 pKa = 8.78HH153 pKa = 5.94CTAEE157 pKa = 4.25YY158 pKa = 10.69GSKK161 pKa = 9.29TYY163 pKa = 10.2RR164 pKa = 11.84PHH166 pKa = 5.22YY167 pKa = 10.08HH168 pKa = 6.95LIIYY172 pKa = 8.21NMPNEE177 pKa = 4.25EE178 pKa = 4.47FFDD181 pKa = 4.1LPAFGSYY188 pKa = 9.96GAGYY192 pKa = 10.35AYY194 pKa = 10.51DD195 pKa = 4.53DD196 pKa = 5.51FIRR199 pKa = 11.84SCWKK203 pKa = 10.52LGLTHH208 pKa = 6.66SRR210 pKa = 11.84LVSDD214 pKa = 4.15VAALRR219 pKa = 11.84YY220 pKa = 8.0CAKK223 pKa = 9.35YY224 pKa = 7.8TAKK227 pKa = 10.36CSSILKK233 pKa = 9.89GKK235 pKa = 9.8NPPFMLQSTKK245 pKa = 10.98YY246 pKa = 9.45GGLGSKK252 pKa = 9.77VYY254 pKa = 10.79KK255 pKa = 10.68NLANEE260 pKa = 4.53FLTQKK265 pKa = 10.88NIVNVNGKK273 pKa = 8.14QVSLPLNAYY282 pKa = 7.86FLRR285 pKa = 11.84KK286 pKa = 9.47VLPSAQQCVGYY297 pKa = 9.86YY298 pKa = 8.05WLRR301 pKa = 11.84IMKK304 pKa = 10.16SLEE307 pKa = 4.07LCGKK311 pKa = 9.86LPPLHH316 pKa = 6.83PFYY319 pKa = 10.72IDD321 pKa = 4.18LLHH324 pKa = 7.0HH325 pKa = 5.74YY326 pKa = 10.15QPAKK330 pKa = 10.74DD331 pKa = 3.48SAIYY335 pKa = 10.55ADD337 pKa = 4.03IVILSGQILKK347 pKa = 8.2TCYY350 pKa = 9.79YY351 pKa = 9.83RR352 pKa = 11.84GLISSRR358 pKa = 11.84FTDD361 pKa = 5.14FSAQKK366 pKa = 9.62TIEE369 pKa = 3.97FLNFKK374 pKa = 10.53HH375 pKa = 6.99SFLQNLPYY383 pKa = 10.29QSPAEE388 pKa = 3.96PKK390 pKa = 10.06ILEE393 pKa = 4.11NYY395 pKa = 8.57IAQNQLDD402 pKa = 3.89RR403 pKa = 11.84QKK405 pKa = 10.82EE406 pKa = 4.11KK407 pKa = 11.15EE408 pKa = 3.99IMM410 pKa = 3.8

Molecular weight: 46.92 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7

0

7

1873

68

774

267.6

30.11

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.46 ± 0.832

1.548 ± 0.506

4.645 ± 0.379

4.698 ± 1.014

4.645 ± 0.774

5.392 ± 0.353

1.762 ± 0.408

6.941 ± 0.52

5.072 ± 0.834

8.916 ± 0.943

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.403 ± 0.255

7.208 ± 0.702

4.592 ± 0.69

4.592 ± 0.494

4.164 ± 0.295

8.97 ± 0.488

6.407 ± 0.661

5.392 ± 0.676

0.481 ± 0.17

5.713 ± 0.972
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski