Amino acid dipepetide frequency for Capybara microvirus Cap1_SP_192

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
12.65AlaAla: 12.65 ± 9.451
0.666AlaCys: 0.666 ± 0.458
6.658AlaAsp: 6.658 ± 1.593
3.329AlaGlu: 3.329 ± 1.468
1.997AlaPhe: 1.997 ± 0.937
5.992AlaGly: 5.992 ± 1.37
1.332AlaHis: 1.332 ± 0.696
2.663AlaIle: 2.663 ± 0.814
3.329AlaLys: 3.329 ± 1.003
4.66AlaLeu: 4.66 ± 1.213
1.997AlaMet: 1.997 ± 0.975
5.326AlaAsn: 5.326 ± 3.042
2.663AlaPro: 2.663 ± 1.832
2.663AlaGln: 2.663 ± 1.727
3.995AlaArg: 3.995 ± 2.112
5.326AlaSer: 5.326 ± 3.023
3.995AlaThr: 3.995 ± 3.209
1.997AlaVal: 1.997 ± 0.97
1.332AlaTrp: 1.332 ± 0.527
3.329AlaTyr: 3.329 ± 0.518
0.0AlaXaa: 0.0 ± 0.0
Cys
1.332CysAla: 1.332 ± 0.527
0.666CysCys: 0.666 ± 0.642
0.666CysAsp: 0.666 ± 0.884
1.997CysGlu: 1.997 ± 1.165
0.0CysPhe: 0.0 ± 0.0
1.332CysGly: 1.332 ± 1.285
0.0CysHis: 0.0 ± 0.0
0.666CysIle: 0.666 ± 0.642
1.332CysLys: 1.332 ± 1.566
0.666CysLeu: 0.666 ± 0.458
0.0CysMet: 0.0 ± 0.0
0.0CysAsn: 0.0 ± 0.0
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
1.332CysArg: 1.332 ± 0.957
0.0CysSer: 0.0 ± 0.0
0.0CysThr: 0.0 ± 0.0
0.666CysVal: 0.666 ± 0.728
0.666CysTrp: 0.666 ± 0.458
0.666CysTyr: 0.666 ± 0.642
0.0CysXaa: 0.0 ± 0.0
Asp
1.997AspAla: 1.997 ± 0.75
1.332AspCys: 1.332 ± 0.736
5.992AspAsp: 5.992 ± 3.089
3.329AspGlu: 3.329 ± 0.872
4.66AspPhe: 4.66 ± 2.142
1.332AspGly: 1.332 ± 1.285
1.332AspHis: 1.332 ± 0.916
2.663AspIle: 2.663 ± 0.854
1.332AspLys: 1.332 ± 1.285
6.658AspLeu: 6.658 ± 2.367
2.663AspMet: 2.663 ± 1.0
4.66AspAsn: 4.66 ± 1.246
0.0AspPro: 0.0 ± 0.0
0.0AspGln: 0.0 ± 0.0
3.995AspArg: 3.995 ± 1.646
7.324AspSer: 7.324 ± 1.04
4.66AspThr: 4.66 ± 1.301
9.987AspVal: 9.987 ± 2.485
1.332AspTrp: 1.332 ± 0.916
5.992AspTyr: 5.992 ± 1.845
0.0AspXaa: 0.0 ± 0.0
Glu
2.663GluAla: 2.663 ± 1.163
0.0GluCys: 0.0 ± 0.0
1.997GluAsp: 1.997 ± 1.082
2.663GluGlu: 2.663 ± 1.975
3.995GluPhe: 3.995 ± 2.862
1.332GluGly: 1.332 ± 1.299
2.663GluHis: 2.663 ± 1.125
3.995GluIle: 3.995 ± 1.263
1.997GluLys: 1.997 ± 1.129
1.332GluLeu: 1.332 ± 0.527
2.663GluMet: 2.663 ± 1.488
0.666GluAsn: 0.666 ± 0.458
1.997GluPro: 1.997 ± 0.708
1.997GluGln: 1.997 ± 0.975
2.663GluArg: 2.663 ± 0.741
4.66GluSer: 4.66 ± 1.209
1.332GluThr: 1.332 ± 1.285
5.326GluVal: 5.326 ± 3.323
0.0GluTrp: 0.0 ± 0.0
2.663GluTyr: 2.663 ± 1.125
0.0GluXaa: 0.0 ± 0.0
Phe
3.329PheAla: 3.329 ± 1.218
0.0PheCys: 0.0 ± 0.0
5.326PheAsp: 5.326 ± 0.978
3.329PheGlu: 3.329 ± 2.517
2.663PhePhe: 2.663 ± 1.007
5.326PheGly: 5.326 ± 2.007
0.666PheHis: 0.666 ± 0.642
3.329PheIle: 3.329 ± 2.331
1.997PheLys: 1.997 ± 0.75
4.66PheLeu: 4.66 ± 2.041
1.332PheMet: 1.332 ± 0.796
4.66PheAsn: 4.66 ± 2.623
3.329PhePro: 3.329 ± 1.223
1.997PheGln: 1.997 ± 0.616
2.663PheArg: 2.663 ± 0.668
3.329PheSer: 3.329 ± 1.456
1.997PheThr: 1.997 ± 0.75
3.329PheVal: 3.329 ± 1.454
0.0PheTrp: 0.0 ± 0.0
3.329PheTyr: 3.329 ± 0.89
0.0PheXaa: 0.0 ± 0.0
Gly
0.666GlyAla: 0.666 ± 0.642
1.332GlyCys: 1.332 ± 0.988
5.326GlyAsp: 5.326 ± 1.774
4.66GlyGlu: 4.66 ± 1.555
2.663GlyPhe: 2.663 ± 0.697
5.326GlyGly: 5.326 ± 1.78
0.0GlyHis: 0.0 ± 0.0
1.332GlyIle: 1.332 ± 0.527
3.995GlyLys: 3.995 ± 2.24
6.658GlyLeu: 6.658 ± 2.542
1.332GlyMet: 1.332 ± 0.636
2.663GlyAsn: 2.663 ± 0.968
0.666GlyPro: 0.666 ± 0.458
0.0GlyGln: 0.0 ± 0.0
1.997GlyArg: 1.997 ± 1.43
9.987GlySer: 9.987 ± 1.841
2.663GlyThr: 2.663 ± 1.91
2.663GlyVal: 2.663 ± 0.668
0.0GlyTrp: 0.0 ± 0.0
5.992GlyTyr: 5.992 ± 1.698
0.0GlyXaa: 0.0 ± 0.0
His
0.666HisAla: 0.666 ± 0.642
0.0HisCys: 0.0 ± 0.0
1.997HisAsp: 1.997 ± 0.645
0.0HisGlu: 0.0 ± 0.0
1.332HisPhe: 1.332 ± 0.916
1.997HisGly: 1.997 ± 1.056
0.0HisHis: 0.0 ± 0.0
0.0HisIle: 0.0 ± 0.0
1.332HisLys: 1.332 ± 1.285
1.332HisLeu: 1.332 ± 0.527
0.0HisMet: 0.0 ± 0.0
1.997HisAsn: 1.997 ± 0.616
0.666HisPro: 0.666 ± 0.642
1.332HisGln: 1.332 ± 0.696
0.0HisArg: 0.0 ± 0.0
3.329HisSer: 3.329 ± 1.003
0.666HisThr: 0.666 ± 0.458
0.666HisVal: 0.666 ± 0.458
0.666HisTrp: 0.666 ± 0.458
1.332HisTyr: 1.332 ± 1.285
0.0HisXaa: 0.0 ± 0.0
Ile
2.663IleAla: 2.663 ± 1.163
0.0IleCys: 0.0 ± 0.0
1.332IleAsp: 1.332 ± 0.527
0.666IleGlu: 0.666 ± 0.458
3.329IlePhe: 3.329 ± 1.754
5.326IleGly: 5.326 ± 1.595
1.332IleHis: 1.332 ± 0.916
1.332IleIle: 1.332 ± 0.916
2.663IleLys: 2.663 ± 1.054
3.329IleLeu: 3.329 ± 0.89
0.666IleMet: 0.666 ± 0.582
5.326IleAsn: 5.326 ± 1.75
5.326IlePro: 5.326 ± 1.774
1.997IleGln: 1.997 ± 1.63
1.332IleArg: 1.332 ± 0.916
3.995IleSer: 3.995 ± 2.164
1.997IleThr: 1.997 ± 0.616
0.0IleVal: 0.0 ± 0.0
0.0IleTrp: 0.0 ± 0.0
2.663IleTyr: 2.663 ± 1.054
0.0IleXaa: 0.0 ± 0.0
Lys
3.995LysAla: 3.995 ± 1.5
0.666LysCys: 0.666 ± 0.642
3.329LysAsp: 3.329 ± 0.925
3.329LysGlu: 3.329 ± 1.468
2.663LysPhe: 2.663 ± 1.007
0.666LysGly: 0.666 ± 0.458
0.0LysHis: 0.0 ± 0.0
1.332LysIle: 1.332 ± 0.916
2.663LysLys: 2.663 ± 1.959
2.663LysLeu: 2.663 ± 1.182
0.0LysMet: 0.0 ± 0.0
1.332LysAsn: 1.332 ± 0.527
1.997LysPro: 1.997 ± 1.339
0.0LysGln: 0.0 ± 0.0
2.663LysArg: 2.663 ± 1.845
3.995LysSer: 3.995 ± 1.581
1.997LysThr: 1.997 ± 1.129
4.66LysVal: 4.66 ± 2.026
0.0LysTrp: 0.0 ± 0.0
3.995LysTyr: 3.995 ± 0.653
0.0LysXaa: 0.0 ± 0.0
Leu
5.326LeuAla: 5.326 ± 1.933
1.332LeuCys: 1.332 ± 0.809
4.66LeuAsp: 4.66 ± 1.146
2.663LeuGlu: 2.663 ± 1.7
3.995LeuPhe: 3.995 ± 1.521
5.326LeuGly: 5.326 ± 1.167
1.997LeuHis: 1.997 ± 1.319
5.326LeuIle: 5.326 ± 1.469
3.329LeuLys: 3.329 ± 0.89
5.326LeuLeu: 5.326 ± 1.652
1.332LeuMet: 1.332 ± 0.722
2.663LeuAsn: 2.663 ± 1.463
7.989LeuPro: 7.989 ± 1.394
2.663LeuGln: 2.663 ± 1.054
5.326LeuArg: 5.326 ± 1.519
9.321LeuSer: 9.321 ± 2.131
3.995LeuThr: 3.995 ± 1.427
4.66LeuVal: 4.66 ± 1.988
0.666LeuTrp: 0.666 ± 0.642
3.995LeuTyr: 3.995 ± 2.882
0.0LeuXaa: 0.0 ± 0.0
Met
0.0MetAla: 0.0 ± 0.0
0.0MetCys: 0.0 ± 0.0
1.332MetAsp: 1.332 ± 0.916
0.0MetGlu: 0.0 ± 0.0
0.666MetPhe: 0.666 ± 0.458
0.666MetGly: 0.666 ± 0.458
0.0MetHis: 0.0 ± 0.0
0.666MetIle: 0.666 ± 0.884
0.666MetLys: 0.666 ± 0.642
3.329MetLeu: 3.329 ± 2.136
0.666MetMet: 0.666 ± 0.458
0.666MetAsn: 0.666 ± 0.458
2.663MetPro: 2.663 ± 0.668
0.666MetGln: 0.666 ± 0.458
0.666MetArg: 0.666 ± 0.458
3.995MetSer: 3.995 ± 2.553
0.666MetThr: 0.666 ± 0.642
1.332MetVal: 1.332 ± 1.254
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
1.332AsnAla: 1.332 ± 0.999
0.0AsnCys: 0.0 ± 0.0
2.663AsnAsp: 2.663 ± 1.512
3.995AsnGlu: 3.995 ± 0.784
3.329AsnPhe: 3.329 ± 1.609
1.332AsnGly: 1.332 ± 0.822
1.997AsnHis: 1.997 ± 0.75
2.663AsnIle: 2.663 ± 1.356
1.997AsnLys: 1.997 ± 1.022
7.324AsnLeu: 7.324 ± 1.18
0.0AsnMet: 0.0 ± 0.0
0.666AsnAsn: 0.666 ± 0.884
2.663AsnPro: 2.663 ± 1.384
2.663AsnGln: 2.663 ± 1.391
5.326AsnArg: 5.326 ± 2.09
4.66AsnSer: 4.66 ± 1.475
3.329AsnThr: 3.329 ± 1.218
4.66AsnVal: 4.66 ± 1.002
1.332AsnTrp: 1.332 ± 0.822
3.329AsnTyr: 3.329 ± 1.146
0.0AsnXaa: 0.0 ± 0.0
Pro
3.329ProAla: 3.329 ± 1.376
0.666ProCys: 0.666 ± 0.642
5.326ProAsp: 5.326 ± 0.978
1.332ProGlu: 1.332 ± 1.285
2.663ProPhe: 2.663 ± 1.285
1.997ProGly: 1.997 ± 1.374
0.666ProHis: 0.666 ± 0.642
2.663ProIle: 2.663 ± 1.832
0.666ProLys: 0.666 ± 0.728
4.66ProLeu: 4.66 ± 1.713
0.666ProMet: 0.666 ± 0.458
3.329ProAsn: 3.329 ± 1.737
1.332ProPro: 1.332 ± 0.866
2.663ProGln: 2.663 ± 1.349
2.663ProArg: 2.663 ± 1.474
3.995ProSer: 3.995 ± 1.624
2.663ProThr: 2.663 ± 0.668
5.992ProVal: 5.992 ± 1.372
0.666ProTrp: 0.666 ± 0.458
2.663ProTyr: 2.663 ± 1.7
0.0ProXaa: 0.0 ± 0.0
Gln
5.992GlnAla: 5.992 ± 3.088
0.0GlnCys: 0.0 ± 0.0
1.332GlnAsp: 1.332 ± 1.285
1.997GlnGlu: 1.997 ± 0.975
1.332GlnPhe: 1.332 ± 0.807
1.332GlnGly: 1.332 ± 0.807
0.666GlnHis: 0.666 ± 0.728
1.997GlnIle: 1.997 ± 0.986
1.332GlnLys: 1.332 ± 0.527
3.329GlnLeu: 3.329 ± 1.343
0.666GlnMet: 0.666 ± 0.66
1.332GlnAsn: 1.332 ± 0.822
1.997GlnPro: 1.997 ± 1.056
0.666GlnGln: 0.666 ± 0.458
1.997GlnArg: 1.997 ± 0.975
1.997GlnSer: 1.997 ± 0.97
1.332GlnThr: 1.332 ± 0.916
2.663GlnVal: 2.663 ± 1.7
0.666GlnTrp: 0.666 ± 0.642
1.332GlnTyr: 1.332 ± 0.527
0.0GlnXaa: 0.0 ± 0.0
Arg
5.326ArgAla: 5.326 ± 2.423
0.0ArgCys: 0.0 ± 0.0
1.332ArgAsp: 1.332 ± 0.916
3.329ArgGlu: 3.329 ± 1.947
2.663ArgPhe: 2.663 ± 0.668
2.663ArgGly: 2.663 ± 0.981
0.0ArgHis: 0.0 ± 0.0
2.663ArgIle: 2.663 ± 1.914
0.0ArgLys: 0.0 ± 0.0
7.989ArgLeu: 7.989 ± 3.545
2.663ArgMet: 2.663 ± 0.709
3.329ArgAsn: 3.329 ± 1.334
1.997ArgPro: 1.997 ± 0.708
2.663ArgGln: 2.663 ± 1.056
3.995ArgArg: 3.995 ± 2.967
5.326ArgSer: 5.326 ± 2.006
0.666ArgThr: 0.666 ± 0.783
1.997ArgVal: 1.997 ± 0.97
0.0ArgTrp: 0.0 ± 0.0
5.326ArgTyr: 5.326 ± 1.652
0.0ArgXaa: 0.0 ± 0.0
Ser
11.984SerAla: 11.984 ± 5.12
1.997SerCys: 1.997 ± 1.525
6.658SerAsp: 6.658 ± 0.645
3.995SerGlu: 3.995 ± 1.385
3.995SerPhe: 3.995 ± 1.793
8.655SerGly: 8.655 ± 2.444
0.666SerHis: 0.666 ± 0.458
4.66SerIle: 4.66 ± 1.301
3.329SerLys: 3.329 ± 0.994
7.324SerLeu: 7.324 ± 1.489
0.666SerMet: 0.666 ± 0.728
9.987SerAsn: 9.987 ± 1.727
5.992SerPro: 5.992 ± 1.364
3.329SerGln: 3.329 ± 1.146
4.66SerArg: 4.66 ± 1.435
7.324SerSer: 7.324 ± 2.743
5.992SerThr: 5.992 ± 2.524
3.995SerVal: 3.995 ± 1.913
0.666SerTrp: 0.666 ± 0.458
3.329SerTyr: 3.329 ± 1.587
0.0SerXaa: 0.0 ± 0.0
Thr
2.663ThrAla: 2.663 ± 1.391
1.332ThrCys: 1.332 ± 1.285
1.997ThrAsp: 1.997 ± 0.616
0.666ThrGlu: 0.666 ± 0.458
3.329ThrPhe: 3.329 ± 2.29
2.663ThrGly: 2.663 ± 1.125
0.666ThrHis: 0.666 ± 0.642
1.997ThrIle: 1.997 ± 1.059
2.663ThrLys: 2.663 ± 0.668
2.663ThrLeu: 2.663 ± 1.049
0.0ThrMet: 0.0 ± 0.0
0.666ThrAsn: 0.666 ± 0.642
3.995ThrPro: 3.995 ± 0.784
2.663ThrGln: 2.663 ± 1.049
4.66ThrArg: 4.66 ± 1.213
9.321ThrSer: 9.321 ± 3.176
1.997ThrThr: 1.997 ± 1.082
1.997ThrVal: 1.997 ± 0.975
0.666ThrTrp: 0.666 ± 0.66
1.997ThrTyr: 1.997 ± 1.082
0.0ThrXaa: 0.0 ± 0.0
Val
3.329ValAla: 3.329 ± 2.314
1.332ValCys: 1.332 ± 1.299
6.658ValAsp: 6.658 ± 2.475
1.997ValGlu: 1.997 ± 0.97
1.997ValPhe: 1.997 ± 1.761
2.663ValGly: 2.663 ± 0.741
1.332ValHis: 1.332 ± 1.164
1.332ValIle: 1.332 ± 0.527
4.66ValLys: 4.66 ± 0.929
5.326ValLeu: 5.326 ± 1.519
0.666ValMet: 0.666 ± 0.783
3.329ValAsn: 3.329 ± 1.213
2.663ValPro: 2.663 ± 1.832
3.995ValGln: 3.995 ± 1.263
1.997ValArg: 1.997 ± 0.75
5.992ValSer: 5.992 ± 3.918
6.658ValThr: 6.658 ± 1.779
1.997ValVal: 1.997 ± 0.986
0.666ValTrp: 0.666 ± 0.458
1.997ValTyr: 1.997 ± 0.708
0.0ValXaa: 0.0 ± 0.0
Trp
1.332TrpAla: 1.332 ± 0.696
0.0TrpCys: 0.0 ± 0.0
0.666TrpAsp: 0.666 ± 0.642
1.332TrpGlu: 1.332 ± 0.916
1.332TrpPhe: 1.332 ± 0.527
0.666TrpGly: 0.666 ± 0.66
0.666TrpHis: 0.666 ± 0.458
1.332TrpIle: 1.332 ± 0.916
0.0TrpLys: 0.0 ± 0.0
0.0TrpLeu: 0.0 ± 0.0
0.0TrpMet: 0.0 ± 0.0
0.666TrpAsn: 0.666 ± 0.458
0.666TrpPro: 0.666 ± 0.458
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
0.0TrpSer: 0.0 ± 0.0
0.666TrpThr: 0.666 ± 0.642
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
0.666TrpTyr: 0.666 ± 0.642
0.0TrpXaa: 0.0 ± 0.0
Tyr
5.326TyrAla: 5.326 ± 2.398
0.666TyrCys: 0.666 ± 0.642
5.992TyrAsp: 5.992 ± 2.576
1.997TyrGlu: 1.997 ± 0.975
7.989TyrPhe: 7.989 ± 1.924
3.329TyrGly: 3.329 ± 2.102
3.329TyrHis: 3.329 ± 1.576
2.663TyrIle: 2.663 ± 1.163
2.663TyrLys: 2.663 ± 1.125
3.329TyrLeu: 3.329 ± 1.213
0.0TyrMet: 0.0 ± 0.0
1.997TyrAsn: 1.997 ± 0.708
1.997TyrPro: 1.997 ± 1.374
1.997TyrGln: 1.997 ± 0.986
1.997TyrArg: 1.997 ± 1.082
5.326TyrSer: 5.326 ± 1.338
1.332TyrThr: 1.332 ± 0.527
1.997TyrVal: 1.997 ± 1.927
0.666TyrTrp: 0.666 ± 0.458
3.995TyrTyr: 3.995 ± 1.581
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 6 proteins (1503 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski