Alteribacillus bidgolensis

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Bacilli; Bacillales; Bacillaceae; Alteribacillus

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4578 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G8LCK3|A0A1G8LCK3_9BACI Regulatory protein RecX OS=Alteribacillus bidgolensis OX=930129 GN=recX PE=3 SV=1
MM1 pKa = 7.58EE2 pKa = 5.96KK3 pKa = 10.48YY4 pKa = 10.41LKK6 pKa = 9.51RR7 pKa = 11.84TLLSAVSGAGILFAAACGGSDD28 pKa = 3.2EE29 pKa = 4.99SGAEE33 pKa = 4.17GEE35 pKa = 4.71ADD37 pKa = 3.21GSADD41 pKa = 3.57GEE43 pKa = 4.37EE44 pKa = 4.25QASEE48 pKa = 4.02EE49 pKa = 4.52GISYY53 pKa = 10.83DD54 pKa = 5.03DD55 pKa = 3.84YY56 pKa = 11.44PSTVKK61 pKa = 10.36IGTASQGGTYY71 pKa = 9.84YY72 pKa = 10.18IYY74 pKa = 11.02GGGIGSLLEE83 pKa = 4.18SEE85 pKa = 5.23LDD87 pKa = 2.87ITANVEE93 pKa = 4.17VTGGPVHH100 pKa = 6.91NMQLTNGKK108 pKa = 8.95DD109 pKa = 3.26QDD111 pKa = 3.59IGLVTLGPGYY121 pKa = 10.63EE122 pKa = 4.26GVTGTGEE129 pKa = 3.75WTEE132 pKa = 4.17GNKK135 pKa = 9.23MEE137 pKa = 4.64DD138 pKa = 3.4VRR140 pKa = 11.84VTFPMYY146 pKa = 7.61TTPFHH151 pKa = 5.68WWSLEE156 pKa = 3.65GSGVEE161 pKa = 5.57SIDD164 pKa = 5.06DD165 pKa = 3.65MDD167 pKa = 3.74GMKK170 pKa = 10.55VGVGPAGGTSGTYY183 pKa = 10.42LPLIHH188 pKa = 7.64DD189 pKa = 4.4ALEE192 pKa = 4.18LNIDD196 pKa = 3.89PVQAGASDD204 pKa = 3.84MVSQQMDD211 pKa = 3.47GQLDD215 pKa = 4.2VIGFAAGIPISAVSEE230 pKa = 4.26VEE232 pKa = 3.77AQRR235 pKa = 11.84DD236 pKa = 3.62INFFGIDD243 pKa = 3.25GEE245 pKa = 4.21QRR247 pKa = 11.84EE248 pKa = 4.69KK249 pKa = 10.49IIEE252 pKa = 4.16EE253 pKa = 3.85YY254 pKa = 10.07PYY256 pKa = 10.35FFEE259 pKa = 4.23YY260 pKa = 10.17TIPADD265 pKa = 3.59TYY267 pKa = 10.16NQLDD271 pKa = 3.88EE272 pKa = 4.81DD273 pKa = 4.77LEE275 pKa = 4.6TIAMFNFGIVHH286 pKa = 6.39KK287 pKa = 9.56EE288 pKa = 3.65ANEE291 pKa = 3.84EE292 pKa = 3.85FVYY295 pKa = 11.03DD296 pKa = 3.71LVKK299 pKa = 10.46AYY301 pKa = 10.57HH302 pKa = 6.35EE303 pKa = 4.31NQEE306 pKa = 4.26KK307 pKa = 10.81LMDD310 pKa = 3.5THH312 pKa = 6.83SAAEE316 pKa = 3.89EE317 pKa = 4.19AEE319 pKa = 4.1IEE321 pKa = 4.91AILQNDD327 pKa = 4.07VMPLHH332 pKa = 6.91PGAIKK337 pKa = 10.07FYY339 pKa = 9.36EE340 pKa = 4.26EE341 pKa = 4.16EE342 pKa = 5.65GIDD345 pKa = 4.15LPEE348 pKa = 4.7DD349 pKa = 3.7VYY351 pKa = 11.18PPEE354 pKa = 4.04WEE356 pKa = 4.01EE357 pKa = 3.77

Molecular weight: 38.68 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G8LQH5|A0A1G8LQH5_9BACI S4 domain protein YaaA OS=Alteribacillus bidgolensis OX=930129 GN=SAMN05216352_10930 PE=4 SV=1
MM1 pKa = 7.67GKK3 pKa = 8.0PTFKK7 pKa = 10.53PNNRR11 pKa = 11.84KK12 pKa = 9.27RR13 pKa = 11.84KK14 pKa = 8.26KK15 pKa = 8.69VHH17 pKa = 5.46GFRR20 pKa = 11.84ARR22 pKa = 11.84MSTKK26 pKa = 10.26NGRR29 pKa = 11.84HH30 pKa = 3.85VLKK33 pKa = 10.52NRR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 8.66GRR40 pKa = 11.84KK41 pKa = 8.69VLSAA45 pKa = 4.05

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4578

0

4578

1244654

27

1533

271.9

30.49

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.23 ± 0.041

0.738 ± 0.01

5.11 ± 0.031

8.062 ± 0.049

4.515 ± 0.031

7.006 ± 0.033

2.224 ± 0.017

7.422 ± 0.032

6.661 ± 0.038

9.413 ± 0.041

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.861 ± 0.017

4.451 ± 0.026

3.783 ± 0.021

3.667 ± 0.027

4.019 ± 0.025

6.088 ± 0.027

5.403 ± 0.021

6.866 ± 0.029

1.087 ± 0.015

3.393 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski