Nesterenkonia jeotgali

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Micrococcales; Micrococcaceae; Nesterenkonia

Average proteome isoelectric point is 5.93

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2504 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0W8ICD3|A0A0W8ICD3_9MICC Acyl-CoA_dh_2 domain-containing protein OS=Nesterenkonia jeotgali OX=317018 GN=AVL63_13120 PE=4 SV=1
MM1 pKa = 7.47TGPSPRR7 pKa = 11.84HH8 pKa = 5.43LWSSSLALTMLLLVTSSCSAEE29 pKa = 3.73QSAQNPSEE37 pKa = 4.23QEE39 pKa = 3.62PSAQDD44 pKa = 3.44SDD46 pKa = 3.91SSPPAEE52 pKa = 4.0QRR54 pKa = 11.84SSPSSAAVGAEE65 pKa = 3.93DD66 pKa = 4.21PEE68 pKa = 4.43EE69 pKa = 3.86EE70 pKa = 4.32AEE72 pKa = 4.24AVTEE76 pKa = 4.2VEE78 pKa = 4.24EE79 pKa = 4.32EE80 pKa = 4.13EE81 pKa = 4.05PSIRR85 pKa = 11.84DD86 pKa = 3.26VEE88 pKa = 4.29FADD91 pKa = 5.09LEE93 pKa = 4.15WTEE96 pKa = 4.03WVNEE100 pKa = 4.15VVLIPAEE107 pKa = 4.45GSDD110 pKa = 3.7GPEE113 pKa = 3.72FEE115 pKa = 4.54VSEE118 pKa = 4.61EE119 pKa = 3.55IHH121 pKa = 6.33YY122 pKa = 11.24ADD124 pKa = 4.93ADD126 pKa = 4.07GDD128 pKa = 4.0GHH130 pKa = 6.77EE131 pKa = 5.17DD132 pKa = 3.49ALVSLGWTDD141 pKa = 3.85DD142 pKa = 4.04RR143 pKa = 11.84GFEE146 pKa = 4.6DD147 pKa = 4.51IWYY150 pKa = 8.61IWAWDD155 pKa = 3.89PDD157 pKa = 4.13TEE159 pKa = 4.46SAYY162 pKa = 10.32QAGGPVARR170 pKa = 11.84AANCGDD176 pKa = 3.35HH177 pKa = 6.5VEE179 pKa = 4.39SVSAGEE185 pKa = 3.74DD186 pKa = 3.06HH187 pKa = 7.27FVIEE191 pKa = 4.09EE192 pKa = 4.16HH193 pKa = 6.58LWPQNADD200 pKa = 3.34HH201 pKa = 7.63DD202 pKa = 4.62CASTPSIQVTRR213 pKa = 11.84HH214 pKa = 5.65LVLEE218 pKa = 4.67DD219 pKa = 3.91DD220 pKa = 4.31WPVMISPVRR229 pKa = 11.84AHH231 pKa = 7.11GGMCPQILGTDD242 pKa = 3.86DD243 pKa = 3.7LWPVEE248 pKa = 4.2DD249 pKa = 4.7FEE251 pKa = 5.65FRR253 pKa = 11.84TSPEE257 pKa = 3.55EE258 pKa = 3.72AAGLVGDD265 pKa = 4.64PAPTAFAEE273 pKa = 4.13ADD275 pKa = 3.23VWSRR279 pKa = 11.84LWLHH283 pKa = 5.89YY284 pKa = 9.35PNWMLVHH291 pKa = 6.73LAYY294 pKa = 10.09MNPADD299 pKa = 4.62GPPVLEE305 pKa = 5.31GGYY308 pKa = 7.65TPCGWVYY315 pKa = 10.96LEE317 pKa = 4.49EE318 pKa = 4.28DD319 pKa = 3.97TRR321 pKa = 11.84PVPHH325 pKa = 7.35DD326 pKa = 4.23PYY328 pKa = 10.68PPEE331 pKa = 4.28DD332 pKa = 3.25

Molecular weight: 36.5 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0W8II41|A0A0W8II41_9MICC Uncharacterized protein OS=Nesterenkonia jeotgali OX=317018 GN=AVL63_10775 PE=4 SV=1
MM1 pKa = 7.48RR2 pKa = 11.84AALFVLVFAVTVIGASLAGSQNLAFVLLMGAAVAALASTVMTASGRR48 pKa = 11.84QALRR52 pKa = 11.84RR53 pKa = 11.84TRR55 pKa = 11.84GNLTQGWSRR64 pKa = 11.84RR65 pKa = 11.84PGG67 pKa = 3.12

Molecular weight: 6.93 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2504

0

2504

820621

38

1656

327.7

35.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.617 ± 0.064

0.553 ± 0.012

5.623 ± 0.038

6.796 ± 0.054

3.036 ± 0.029

8.769 ± 0.043

2.267 ± 0.024

4.377 ± 0.031

2.204 ± 0.036

10.389 ± 0.064

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.095 ± 0.022

2.067 ± 0.023

5.353 ± 0.035

3.649 ± 0.028

6.847 ± 0.044

6.15 ± 0.034

5.908 ± 0.029

7.935 ± 0.036

1.414 ± 0.019

1.95 ± 0.023
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski