Tortoise microvirus 58

Taxonomy: Viruses; Monodnaviria; Sangervirae; Phixviricota; Malgrandaviricetes; Petitvirales; Microviridae; unclassified Microviridae

Average proteome isoelectric point is 5.68

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 6 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A4P8W6S8|A0A4P8W6S8_9VIRU Major capsid protein OS=Tortoise microvirus 58 OX=2583163 PE=3 SV=1
MM1 pKa = 7.72DD2 pKa = 3.39VAYY5 pKa = 10.15EE6 pKa = 4.4RR7 pKa = 11.84IHH9 pKa = 7.07GLTCAPNVALAIRR22 pKa = 11.84DD23 pKa = 3.41ISPTLKK29 pKa = 10.08RR30 pKa = 11.84VAPHH34 pKa = 6.51FLDD37 pKa = 4.85DD38 pKa = 3.66MEE40 pKa = 4.91LRR42 pKa = 11.84EE43 pKa = 4.24IGYY46 pKa = 9.96FDD48 pKa = 4.71SDD50 pKa = 4.7LEE52 pKa = 4.11FHH54 pKa = 6.66PTPAVVHH61 pKa = 6.09SWDD64 pKa = 3.66EE65 pKa = 4.23YY66 pKa = 11.26KK67 pKa = 11.07DD68 pKa = 3.51PEE70 pKa = 4.57QPVTPLSDD78 pKa = 3.42GQLKK82 pKa = 10.6DD83 pKa = 3.65FQRR86 pKa = 5.05

Molecular weight: 9.87 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A4P8W9U0|A0A4P8W9U0_9VIRU Uncharacterized protein OS=Tortoise microvirus 58 OX=2583163 PE=4 SV=1
MM1 pKa = 7.48ACSSPFFLEE10 pKa = 5.13RR11 pKa = 11.84ITDD14 pKa = 3.47YY15 pKa = 10.75RR16 pKa = 11.84GRR18 pKa = 11.84PVPLPCQKK26 pKa = 10.48CNCCRR31 pKa = 11.84ADD33 pKa = 3.12KK34 pKa = 8.35TTYY37 pKa = 5.55WTRR40 pKa = 11.84RR41 pKa = 11.84ANYY44 pKa = 7.99EE45 pKa = 3.66WTHH48 pKa = 5.57SVSSAFVTFTYY59 pKa = 10.51DD60 pKa = 3.98EE61 pKa = 4.06EE62 pKa = 4.28HH63 pKa = 6.63LPIGGSLEE71 pKa = 3.89PTLRR75 pKa = 11.84RR76 pKa = 11.84DD77 pKa = 3.48DD78 pKa = 3.47LHH80 pKa = 8.58RR81 pKa = 11.84YY82 pKa = 8.8IDD84 pKa = 3.93TVRR87 pKa = 11.84HH88 pKa = 5.62RR89 pKa = 11.84LKK91 pKa = 10.55KK92 pKa = 10.2DD93 pKa = 3.0GKK95 pKa = 9.74IPPRR99 pKa = 11.84CVPNFSYY106 pKa = 10.0MASGEE111 pKa = 4.22YY112 pKa = 10.24GDD114 pKa = 4.35SFGRR118 pKa = 11.84PHH120 pKa = 5.56YY121 pKa = 10.23HH122 pKa = 5.88VLFFGLDD129 pKa = 3.34FEE131 pKa = 4.83TCKK134 pKa = 10.69KK135 pKa = 9.93YY136 pKa = 10.81LKK138 pKa = 10.48KK139 pKa = 10.1SWPYY143 pKa = 11.12GSIAVNPVRR152 pKa = 11.84DD153 pKa = 3.36GAIRR157 pKa = 11.84YY158 pKa = 6.56VVSYY162 pKa = 10.45ISKK165 pKa = 9.33QLYY168 pKa = 9.89GEE170 pKa = 4.16EE171 pKa = 3.56RR172 pKa = 11.84DD173 pKa = 4.47ARR175 pKa = 11.84FFDD178 pKa = 4.3YY179 pKa = 10.55GVEE182 pKa = 4.1PPFLSVSRR190 pKa = 11.84GFGSGLFKK198 pKa = 10.98DD199 pKa = 3.44QAEE202 pKa = 4.51NIRR205 pKa = 11.84EE206 pKa = 3.92YY207 pKa = 11.27GALKK211 pKa = 10.35FGQKK215 pKa = 9.8FFSVPSYY222 pKa = 9.88WKK224 pKa = 10.44NKK226 pKa = 9.04YY227 pKa = 9.88IDD229 pKa = 3.65MDD231 pKa = 3.53IEE233 pKa = 4.34KK234 pKa = 10.46ADD236 pKa = 3.54EE237 pKa = 4.41RR238 pKa = 11.84YY239 pKa = 10.14EE240 pKa = 3.77RR241 pKa = 11.84AQRR244 pKa = 11.84LRR246 pKa = 11.84FEE248 pKa = 4.23RR249 pKa = 11.84WNLSGRR255 pKa = 11.84HH256 pKa = 4.65FQSPAGWTRR265 pKa = 11.84EE266 pKa = 3.82RR267 pKa = 11.84NRR269 pKa = 11.84VRR271 pKa = 11.84EE272 pKa = 3.85LVLYY276 pKa = 10.1QKK278 pKa = 10.85ARR280 pKa = 11.84NRR282 pKa = 11.84NSKK285 pKa = 9.87VGYY288 pKa = 8.26EE289 pKa = 4.05RR290 pKa = 11.84PIEE293 pKa = 3.94LRR295 pKa = 11.84PTGVGASIARR305 pKa = 11.84RR306 pKa = 11.84LRR308 pKa = 3.55

Molecular weight: 36.24 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

6

0

6

1677

86

668

279.5

31.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.977 ± 0.807

1.073 ± 0.55

7.036 ± 1.033

4.711 ± 0.835

4.949 ± 0.591

6.619 ± 0.619

1.67 ± 0.405

4.592 ± 0.457

4.055 ± 1.028

8.229 ± 0.423

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.087 ± 0.248

4.114 ± 0.588

4.949 ± 1.04

4.114 ± 0.703

6.559 ± 1.084

9.064 ± 0.749

6.082 ± 0.81

6.798 ± 0.586

1.491 ± 0.267

4.83 ± 0.915
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski