Uncinocarpus reesii (strain UAMH 1704)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; Eurotiomycetes; Eurotiomycetidae; Onygenales; Onygenaceae; Uncinocarpus; Uncinocarpus reesii

Average proteome isoelectric point is 6.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 7760 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C4JMP0|C4JMP0_UNCRE DNA-directed RNA polymerase subunit beta OS=Uncinocarpus reesii (strain UAMH 1704) OX=336963 GN=UREG_04098 PE=3 SV=1
MM1 pKa = 7.64EE2 pKa = 5.16KK3 pKa = 10.27CCNSPVVTYY12 pKa = 11.1GEE14 pKa = 4.27DD15 pKa = 3.1CGMYY19 pKa = 10.2CLASGGTVGEE29 pKa = 4.25LVRR32 pKa = 11.84CIIGDD37 pKa = 4.13GVADD41 pKa = 3.93GQVFCNMASNATATGSATPTATNSDD66 pKa = 4.0RR67 pKa = 11.84DD68 pKa = 4.62DD69 pKa = 5.51DD70 pKa = 6.21DD71 pKa = 6.14DD72 pKa = 4.74DD73 pKa = 4.58KK74 pKa = 11.82KK75 pKa = 10.72PTGTEE80 pKa = 3.74TSPAATSSNAAFASVPQQPISKK102 pKa = 9.02PAIGVLFTLFFSTFASVLFAA122 pKa = 5.45

Molecular weight: 12.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C4JQG6|C4JQG6_UNCRE Uncharacterized protein OS=Uncinocarpus reesii (strain UAMH 1704) OX=336963 GN=UREG_04720 PE=4 SV=1
MM1 pKa = 8.09DD2 pKa = 4.99GGATRR7 pKa = 11.84IDD9 pKa = 3.7SEE11 pKa = 4.53SFKK14 pKa = 10.94ARR16 pKa = 11.84RR17 pKa = 11.84EE18 pKa = 3.85FRR20 pKa = 11.84EE21 pKa = 4.18AALSLPPRR29 pKa = 11.84EE30 pKa = 4.08PHH32 pKa = 6.27PWTPALRR39 pKa = 11.84RR40 pKa = 11.84HH41 pKa = 5.02VWAALKK47 pKa = 10.83GKK49 pKa = 9.74GAVGILQPGQATTRR63 pKa = 11.84SSQFRR68 pKa = 11.84GSGPDD73 pKa = 3.18AAPLLRR79 pKa = 11.84TRR81 pKa = 11.84LLDD84 pKa = 3.34WSSDD88 pKa = 3.39RR89 pKa = 11.84DD90 pKa = 3.03RR91 pKa = 11.84DD92 pKa = 3.67LFDD95 pKa = 4.49RR96 pKa = 11.84GGPRR100 pKa = 11.84IQHH103 pKa = 5.98RR104 pKa = 11.84QTEE107 pKa = 4.33LLDD110 pKa = 3.71MGSSRR115 pKa = 11.84LSRR118 pKa = 11.84KK119 pKa = 9.66GDD121 pKa = 3.15EE122 pKa = 4.62CGTVRR127 pKa = 11.84LRR129 pKa = 11.84GYY131 pKa = 11.29KK132 pKa = 8.42MLRR135 pKa = 11.84GNGVCSSEE143 pKa = 3.66MCAADD148 pKa = 3.87RR149 pKa = 11.84RR150 pKa = 11.84AVLSYY155 pKa = 10.71DD156 pKa = 3.39YY157 pKa = 11.17RR158 pKa = 5.68

Molecular weight: 17.68 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

7760

0

7760

3724661

49

5757

480.0

53.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.212 ± 0.021

1.221 ± 0.011

5.618 ± 0.019

6.314 ± 0.027

3.723 ± 0.016

6.611 ± 0.024

2.416 ± 0.012

5.042 ± 0.019

5.082 ± 0.021

8.99 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.093 ± 0.01

3.777 ± 0.014

6.313 ± 0.032

4.049 ± 0.019

6.448 ± 0.023

8.473 ± 0.032

5.744 ± 0.017

5.875 ± 0.021

1.338 ± 0.009

2.66 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski