Longilinea arvoryzae

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Chloroflexi; Anaerolineae; Anaerolineales; Anaerolineaceae; Longilinea

Average proteome isoelectric point is 6.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3871 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0S7BDH4|A0A0S7BDH4_9CHLR Molecular chaperone HSP90 family OS=Longilinea arvoryzae OX=360412 GN=LARV_00524 PE=4 SV=1
MM1 pKa = 7.57TNPSNFKK8 pKa = 10.56LINLGLTLIIALGCVFSGITPVQAAAQGLSNTYY41 pKa = 7.83TQSFDD46 pKa = 3.14GLRR49 pKa = 11.84ASGSGAWVNDD59 pKa = 3.11STLPGWYY66 pKa = 9.79ASRR69 pKa = 11.84NQITADD75 pKa = 3.61NGSSGAGGMFSYY87 pKa = 11.04GSTASAEE94 pKa = 4.29RR95 pKa = 11.84AFGALPKK102 pKa = 10.26KK103 pKa = 9.46NTGGTIYY110 pKa = 10.51KK111 pKa = 10.51GLLLQNDD118 pKa = 4.35TLNEE122 pKa = 3.69ITRR125 pKa = 11.84LYY127 pKa = 10.8VAFTGEE133 pKa = 3.65QWRR136 pKa = 11.84NSAGGTQILAFSYY149 pKa = 10.46QVGASAITSLTAGAWTSLTSLDD171 pKa = 3.56FSAPVTSGTAGALNGNLPANQRR193 pKa = 11.84RR194 pKa = 11.84RR195 pKa = 11.84TAQFSVAIPAGSYY208 pKa = 10.82IMLRR212 pKa = 11.84WTDD215 pKa = 3.31ADD217 pKa = 3.77EE218 pKa = 4.22QGADD222 pKa = 3.4HH223 pKa = 7.0GLAIDD228 pKa = 4.15DD229 pKa = 4.54LVVSRR234 pKa = 11.84YY235 pKa = 10.0DD236 pKa = 3.59PPQAAADD243 pKa = 4.3AYY245 pKa = 9.07QTSEE249 pKa = 4.28DD250 pKa = 4.03TPLTIAAPGLLANDD264 pKa = 4.41TAHH267 pKa = 6.69QGQPLSAVLVDD278 pKa = 4.18QPSHH282 pKa = 5.87GAVVLNADD290 pKa = 3.74GSFTYY295 pKa = 10.36TPTADD300 pKa = 3.24WNGSDD305 pKa = 4.08SFTYY309 pKa = 8.32TAKK312 pKa = 10.6EE313 pKa = 3.84AGLASAPAAVTLTISPVNDD332 pKa = 3.6APRR335 pKa = 11.84AAADD339 pKa = 3.76GGTTDD344 pKa = 3.59EE345 pKa = 5.28DD346 pKa = 4.15VPLVQPAPGVLDD358 pKa = 3.83NDD360 pKa = 3.61SDD362 pKa = 4.55ADD364 pKa = 3.83GDD366 pKa = 4.31ALTTALVDD374 pKa = 4.44GPSHH378 pKa = 7.31GSLTLNSDD386 pKa = 3.14GSYY389 pKa = 10.06TYY391 pKa = 10.41TPNADD396 pKa = 3.01WNGTDD401 pKa = 3.05NFTYY405 pKa = 9.74TAFDD409 pKa = 3.63GVVNSSVATVTLTVNPAADD428 pKa = 3.95APRR431 pKa = 11.84TTPDD435 pKa = 3.37SYY437 pKa = 11.88DD438 pKa = 3.29VDD440 pKa = 3.9EE441 pKa = 5.54DD442 pKa = 4.05ALLSIAAPGLLEE454 pKa = 4.77NDD456 pKa = 3.27TDD458 pKa = 4.62ADD460 pKa = 4.09GDD462 pKa = 3.87NLTAVWVSDD471 pKa = 3.78PLHH474 pKa = 6.48GVLALNADD482 pKa = 3.68GSYY485 pKa = 10.03TYY487 pKa = 10.79QPDD490 pKa = 3.97ANWNGDD496 pKa = 3.66DD497 pKa = 3.79SFTYY501 pKa = 9.85QASDD505 pKa = 3.45GFLLSAVEE513 pKa = 4.34AVTLHH518 pKa = 5.27VQPINDD524 pKa = 3.97APTAIEE530 pKa = 4.89DD531 pKa = 4.51GYY533 pKa = 9.96STPEE537 pKa = 3.65DD538 pKa = 3.41TQLNVNAPGVLGNDD552 pKa = 3.52TDD554 pKa = 4.51RR555 pKa = 11.84DD556 pKa = 3.86GDD558 pKa = 3.91GLSAHH563 pKa = 6.89LVTDD567 pKa = 4.62ASHH570 pKa = 7.49GDD572 pKa = 3.34LTLNADD578 pKa = 3.86GSFSYY583 pKa = 10.97QPDD586 pKa = 3.79SDD588 pKa = 3.97WNGDD592 pKa = 3.65DD593 pKa = 3.43SFTYY597 pKa = 10.01AAHH600 pKa = 6.92DD601 pKa = 4.05AEE603 pKa = 4.81STSGTVTVEE612 pKa = 3.78LTVNPVNDD620 pKa = 4.44APTATADD627 pKa = 3.5TYY629 pKa = 11.77SLVEE633 pKa = 4.36NGSLSIPANGVLANDD648 pKa = 3.54IDD650 pKa = 3.97VDD652 pKa = 4.25GDD654 pKa = 3.71VLTAVLDD661 pKa = 3.9SSTSHH666 pKa = 7.03GSLTLNTDD674 pKa = 3.09GSFSYY679 pKa = 10.54TPAADD684 pKa = 3.47WNGSDD689 pKa = 4.28SFTYY693 pKa = 10.04HH694 pKa = 6.85ANDD697 pKa = 3.73GAASSEE703 pKa = 4.49TVTVTLTVDD712 pKa = 3.64PDD714 pKa = 3.1NTAPYY719 pKa = 9.87RR720 pKa = 11.84IAPLPDD726 pKa = 3.15QNHH729 pKa = 7.19PARR732 pKa = 11.84TPYY735 pKa = 10.97SFDD738 pKa = 2.84TSAYY742 pKa = 10.35FGDD745 pKa = 4.4SDD747 pKa = 3.92TGDD750 pKa = 3.34VLTFSAQLVDD760 pKa = 5.05GNPLPPWLSCNTASGVLSGTPPLAAIGVYY789 pKa = 9.64SIRR792 pKa = 11.84VTASDD797 pKa = 3.69GSATVSDD804 pKa = 4.95DD805 pKa = 3.48FDD807 pKa = 4.04LTVEE811 pKa = 4.22DD812 pKa = 3.27NPYY815 pKa = 10.75RR816 pKa = 11.84LFIPMVLRR824 pKa = 4.33

Molecular weight: 85.39 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0S7BML4|A0A0S7BML4_9CHLR Transcriptional regulator LacI family OS=Longilinea arvoryzae OX=360412 GN=LARV_02734 PE=4 SV=1
MM1 pKa = 7.42ARR3 pKa = 11.84YY4 pKa = 6.96TGPVCRR10 pKa = 11.84LCRR13 pKa = 11.84RR14 pKa = 11.84EE15 pKa = 3.87NEE17 pKa = 3.97KK18 pKa = 11.08LFLKK22 pKa = 10.73GSRR25 pKa = 11.84CFSAKK30 pKa = 9.99CAFEE34 pKa = 4.07RR35 pKa = 11.84RR36 pKa = 11.84GFAPGQHH43 pKa = 5.91GKK45 pKa = 9.85SGQRR49 pKa = 11.84GGEE52 pKa = 3.91RR53 pKa = 11.84EE54 pKa = 3.86SDD56 pKa = 3.57YY57 pKa = 11.52SRR59 pKa = 11.84QLRR62 pKa = 11.84AKK64 pKa = 8.32QKK66 pKa = 8.27VRR68 pKa = 11.84RR69 pKa = 11.84VYY71 pKa = 10.78GVLEE75 pKa = 3.87RR76 pKa = 11.84QFRR79 pKa = 11.84RR80 pKa = 11.84TFAIARR86 pKa = 11.84KK87 pKa = 7.34TPGLTGLALLVTLEE101 pKa = 3.94MRR103 pKa = 11.84LDD105 pKa = 3.55NVIYY109 pKa = 10.75RR110 pKa = 11.84MGLAEE115 pKa = 4.39NRR117 pKa = 11.84SQARR121 pKa = 11.84QLVNHH126 pKa = 6.07GHH128 pKa = 6.08FLVNGRR134 pKa = 11.84RR135 pKa = 11.84ADD137 pKa = 3.54IPSMILRR144 pKa = 11.84QGDD147 pKa = 4.24VITLHH152 pKa = 5.99EE153 pKa = 4.51SARR156 pKa = 11.84KK157 pKa = 4.98TTYY160 pKa = 9.95FKK162 pKa = 11.03EE163 pKa = 4.12LADD166 pKa = 3.62VAEE169 pKa = 4.42KK170 pKa = 10.35RR171 pKa = 11.84VCASWLDD178 pKa = 3.61RR179 pKa = 11.84DD180 pKa = 4.23LKK182 pKa = 9.85TISGRR187 pKa = 11.84VLRR190 pKa = 11.84SPEE193 pKa = 3.62RR194 pKa = 11.84AEE196 pKa = 3.86IDD198 pKa = 3.6GNLNEE203 pKa = 4.11QLIVEE208 pKa = 4.55YY209 pKa = 10.47YY210 pKa = 10.54SRR212 pKa = 4.63

Molecular weight: 24.41 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3871

0

3871

1319558

27

2980

340.9

37.56

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.897 ± 0.053

0.903 ± 0.015

5.201 ± 0.027

5.804 ± 0.04

3.968 ± 0.03

7.785 ± 0.035

1.911 ± 0.017

5.966 ± 0.039

3.465 ± 0.036

11.106 ± 0.052

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.362 ± 0.019

3.41 ± 0.028

5.255 ± 0.034

4.037 ± 0.025

5.975 ± 0.037

5.828 ± 0.038

5.504 ± 0.05

7.101 ± 0.031

1.569 ± 0.017

2.954 ± 0.029
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski