Arthrobacter phage vB_ArtM-ArV1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Klausavirus; Arthrobacter virus ArV1

Average proteome isoelectric point is 6.21

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 101 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A7HAK3|A0A0A7HAK3_9CAUD Major capsid protein OS=Arthrobacter phage vB_ArtM-ArV1 OX=1566993 GN=ArV1_009 PE=4 SV=1
MM1 pKa = 7.26AQLTFEE7 pKa = 4.4EE8 pKa = 3.99ARR10 pKa = 11.84AAVRR14 pKa = 11.84AQNQPIWEE22 pKa = 4.83DD23 pKa = 2.88NDD25 pKa = 4.04TPGEE29 pKa = 4.12YY30 pKa = 9.17MVAGYY35 pKa = 9.93GWEE38 pKa = 3.94NDD40 pKa = 3.05EE41 pKa = 5.53SYY43 pKa = 11.63LLVEE47 pKa = 4.83GARR50 pKa = 11.84EE51 pKa = 3.89YY52 pKa = 11.51LEE54 pKa = 5.85DD55 pKa = 4.01GLFEE59 pKa = 4.41YY60 pKa = 11.15VVMDD64 pKa = 4.6APAVFVDD71 pKa = 4.18KK72 pKa = 10.3EE73 pKa = 4.45TGTVALAEE81 pKa = 4.18FLTVFEE87 pKa = 5.66VIQSMTPVPGHH98 pKa = 6.28EE99 pKa = 4.88PPTDD103 pKa = 4.2PDD105 pKa = 3.7DD106 pKa = 5.81DD107 pKa = 4.1EE108 pKa = 4.73

Molecular weight: 12.09 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A7HBU5|A0A0A7HBU5_9CAUD Uncharacterized protein OS=Arthrobacter phage vB_ArtM-ArV1 OX=1566993 GN=ArV1_048 PE=4 SV=1
MM1 pKa = 7.81AGRR4 pKa = 11.84EE5 pKa = 3.98RR6 pKa = 11.84HH7 pKa = 6.09PLPGGPPRR15 pKa = 11.84QMPHH19 pKa = 5.16MRR21 pKa = 11.84RR22 pKa = 11.84GPRR25 pKa = 11.84QRR27 pKa = 11.84LPRR30 pKa = 11.84PLEE33 pKa = 3.85RR34 pKa = 11.84RR35 pKa = 11.84NGHH38 pKa = 5.22TPPRR42 pKa = 11.84PHH44 pKa = 5.54QRR46 pKa = 11.84SRR48 pKa = 11.84GSPTNQPTGKK58 pKa = 10.22DD59 pKa = 3.18MPLLHH64 pKa = 7.06GKK66 pKa = 8.77PGHH69 pKa = 5.81AVRR72 pKa = 11.84RR73 pKa = 11.84PKK75 pKa = 9.78WPNHH79 pKa = 4.96CRR81 pKa = 11.84FPRR84 pKa = 11.84IPRR87 pKa = 11.84GIRR90 pKa = 11.84MTTGMTNNQAALLAATTANANRR112 pKa = 11.84LVTNRR117 pKa = 11.84EE118 pKa = 3.49IVQATMSFKK127 pKa = 10.82EE128 pKa = 4.79LLDD131 pKa = 3.9TLDD134 pKa = 4.03KK135 pKa = 11.18QDD137 pKa = 3.55ATTQAEE143 pKa = 4.16AEE145 pKa = 4.27KK146 pKa = 11.14AEE148 pKa = 4.91DD149 pKa = 3.99YY150 pKa = 10.58QALPAYY156 pKa = 7.32CQPHH160 pKa = 6.12LKK162 pKa = 9.79EE163 pKa = 4.26VYY165 pKa = 10.61ADD167 pKa = 3.8FWGQGVPKK175 pKa = 10.4ARR177 pKa = 11.84ALQPGEE183 pKa = 4.31HH184 pKa = 6.3CTGNPFSPTQCEE196 pKa = 4.14NSPAPQPNEE205 pKa = 3.69EE206 pKa = 4.35GTNQQ210 pKa = 3.19

Molecular weight: 23.48 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

101

0

101

22761

67

1177

225.4

24.47

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

11.915 ± 0.343

0.861 ± 0.124

5.883 ± 0.166

6.059 ± 0.302

2.834 ± 0.163

8.352 ± 0.361

2.289 ± 0.177

4.016 ± 0.18

4.402 ± 0.234

7.465 ± 0.213

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.478 ± 0.098

3.849 ± 0.151

6.581 ± 0.257

3.423 ± 0.161

5.896 ± 0.266

4.89 ± 0.209

7.043 ± 0.234

7.473 ± 0.264

1.836 ± 0.136

2.456 ± 0.147
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski