CRESS virus sp. ctin15

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; unclassified Cressdnaviricota; CRESS viruses

Average proteome isoelectric point is 6.7

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5Q2WB13|A0A5Q2WB13_9VIRU Rep protein OS=CRESS virus sp. ctin15 OX=2656686 PE=4 SV=1
MM1 pKa = 7.95DD2 pKa = 6.09CYY4 pKa = 11.41SCFYY8 pKa = 9.02TEE10 pKa = 5.16KK11 pKa = 10.13YY12 pKa = 10.21SSSSSDD18 pKa = 3.14SSSDD22 pKa = 3.65DD23 pKa = 4.01SKK25 pKa = 11.82DD26 pKa = 3.29KK27 pKa = 10.97KK28 pKa = 10.48KK29 pKa = 10.82KK30 pKa = 10.3KK31 pKa = 10.29EE32 pKa = 3.94EE33 pKa = 4.01LDD35 pKa = 3.85DD36 pKa = 4.31YY37 pKa = 11.59INFIDD42 pKa = 3.99NPFDD46 pKa = 3.31ISQIDD51 pKa = 3.43IPLSNNVSYY60 pKa = 11.44LDD62 pKa = 3.79YY63 pKa = 10.09PYY65 pKa = 11.22LMPVSSSVSPGYY77 pKa = 9.32TIINRR82 pKa = 11.84DD83 pKa = 3.22IQTLNEE89 pKa = 3.81MRR91 pKa = 11.84PIPFNLNSPFTEE103 pKa = 4.26EE104 pKa = 4.38GLTTALSNYY113 pKa = 9.01FGTGSYY119 pKa = 10.53PIFTKK124 pKa = 10.64ASPSAQYY131 pKa = 10.61LVQEE135 pKa = 4.5GMPIYY140 pKa = 9.92TGPFDD145 pKa = 5.28KK146 pKa = 10.8NGPMNPDD153 pKa = 3.18DD154 pKa = 3.83EE155 pKa = 5.49ARR157 pKa = 11.84FLKK160 pKa = 10.82DD161 pKa = 3.93EE162 pKa = 4.47LEE164 pKa = 4.0PWIRR168 pKa = 11.84LHH170 pKa = 5.97PHH172 pKa = 6.37VIPIIGEE179 pKa = 4.14CVMEE183 pKa = 4.26NPGFHH188 pKa = 7.24PSYY191 pKa = 9.49KK192 pKa = 9.88QRR194 pKa = 11.84GNRR197 pKa = 11.84YY198 pKa = 9.77SFIDD202 pKa = 3.19INGKK206 pKa = 7.58QRR208 pKa = 11.84YY209 pKa = 6.55TYY211 pKa = 10.59GFKK214 pKa = 9.46PTWDD218 pKa = 3.62MFLKK222 pKa = 9.86PDD224 pKa = 4.12KK225 pKa = 10.75YY226 pKa = 10.96PMVVEE231 pKa = 4.15MGNLRR236 pKa = 11.84TSTRR240 pKa = 11.84PVRR243 pKa = 11.84EE244 pKa = 4.02PFRR247 pKa = 11.84GFSPPMYY254 pKa = 10.64ASDD257 pKa = 4.02EE258 pKa = 4.17EE259 pKa = 4.21MDD261 pKa = 4.2GYY263 pKa = 11.01EE264 pKa = 4.8LNPSTLPSVVPPPPPPPPPPPPPTPTPVDD293 pKa = 3.76PNIISPIYY301 pKa = 10.0YY302 pKa = 10.04SYY304 pKa = 11.28PLLFWNEE311 pKa = 3.79PNIISGSSYY320 pKa = 10.41EE321 pKa = 4.04IPQLNSAGLCLNSDD335 pKa = 3.92CSIGGVRR342 pKa = 11.84SIEE345 pKa = 3.98APNIDD350 pKa = 3.68RR351 pKa = 11.84FIIKK355 pKa = 10.07IPDD358 pKa = 3.45NAISRR363 pKa = 11.84VLNVKK368 pKa = 10.0KK369 pKa = 10.79VFYY372 pKa = 9.1KK373 pKa = 10.85TNLNQNLPIIIKK385 pKa = 8.84LKK387 pKa = 9.2CTVLPVVNNYY397 pKa = 9.71PLILTSAPDD406 pKa = 4.36AFPMLYY412 pKa = 9.27TLTIPTVNYY421 pKa = 9.11PLGFTGISILFNTGSSSPSTGGEE444 pKa = 3.79IIFDD448 pKa = 3.72EE449 pKa = 4.71VQTYY453 pKa = 8.34WDD455 pKa = 3.94PRR457 pKa = 11.84VKK459 pKa = 10.86LNLTTHH465 pKa = 6.84IAMNSLFNGGTPNVQADD482 pKa = 3.83NGSATLSGVSKK493 pKa = 9.76TIEE496 pKa = 3.87YY497 pKa = 10.8RR498 pKa = 11.84NGTNNTNLRR507 pKa = 11.84FQRR510 pKa = 11.84NIGLNWNTYY519 pKa = 6.71VQYY522 pKa = 11.3LNRR525 pKa = 11.84TRR527 pKa = 11.84SEE529 pKa = 3.95FNYY532 pKa = 10.42AGYY535 pKa = 11.37AMQGEE540 pKa = 4.7SQYY543 pKa = 11.6SRR545 pKa = 11.84GFTGSANIIGTLGTLGTKK563 pKa = 10.53LNFVAAGVATAAPTTTVTRR582 pKa = 11.84RR583 pKa = 11.84VDD585 pKa = 3.11IFSNDD590 pKa = 3.39YY591 pKa = 11.25LNSQFVNYY599 pKa = 10.25GYY601 pKa = 10.87LHH603 pKa = 6.29YY604 pKa = 10.59IITT607 pKa = 4.05

Molecular weight: 67.9 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5Q2W8K2|A0A5Q2W8K2_9VIRU Actin OS=CRESS virus sp. ctin15 OX=2656686 PE=4 SV=1
MM1 pKa = 7.52TKK3 pKa = 10.38LSHH6 pKa = 6.83KK7 pKa = 10.5FSLCKK12 pKa = 9.85MISDD16 pKa = 4.5LTTIKK21 pKa = 11.05NPFNTAAFASKK32 pKa = 10.86VPDD35 pKa = 4.02GKK37 pKa = 10.33CGYY40 pKa = 9.95SIGVKK45 pKa = 9.97RR46 pKa = 11.84QVSKK50 pKa = 11.03QIVSSKK56 pKa = 8.86GAKK59 pKa = 9.57IFVLTPTFNCSGFNCDD75 pKa = 3.04VVGNVIDD82 pKa = 4.7GIEE85 pKa = 3.91YY86 pKa = 8.52HH87 pKa = 6.33TFSDD91 pKa = 3.31SDD93 pKa = 3.41ITVRR97 pKa = 11.84APSATALAGTAAATVEE113 pKa = 4.42TNLTLGNNSPEE124 pKa = 4.05KK125 pKa = 9.89WRR127 pKa = 11.84MVSAGMKK134 pKa = 8.56ITLTNNSEE142 pKa = 4.35KK143 pKa = 10.67NDD145 pKa = 3.04GWFEE149 pKa = 4.64AIRR152 pKa = 11.84VNASPSSKK160 pKa = 10.79DD161 pKa = 3.39YY162 pKa = 11.63VFLKK166 pKa = 10.86NVGQDD171 pKa = 3.21EE172 pKa = 5.46GILGVHH178 pKa = 6.89PFFEE182 pKa = 5.03DD183 pKa = 3.65SIIGKK188 pKa = 8.97SEE190 pKa = 3.47SWVNHH195 pKa = 5.48PSYY198 pKa = 10.52VTGKK202 pKa = 10.25LRR204 pKa = 11.84DD205 pKa = 3.56LHH207 pKa = 7.95KK208 pKa = 10.7HH209 pKa = 4.78MFILQQVNGSRR220 pKa = 11.84DD221 pKa = 3.26FCTIRR226 pKa = 11.84QNNTSSGFKK235 pKa = 10.4DD236 pKa = 3.3PQIPIGAFKK245 pKa = 10.62SGPSEE250 pKa = 3.99AFTFKK255 pKa = 10.75NADD258 pKa = 4.24EE259 pKa = 4.43IEE261 pKa = 4.04HH262 pKa = 6.47WADD265 pKa = 3.62DD266 pKa = 3.82SCFDD270 pKa = 3.71VVLVKK275 pKa = 10.55CYY277 pKa = 10.64SATDD281 pKa = 3.73TVGSSTTNLHH291 pKa = 5.37LHH293 pKa = 5.66MVHH296 pKa = 5.2NHH298 pKa = 4.83EE299 pKa = 4.88YY300 pKa = 9.99IYY302 pKa = 11.0DD303 pKa = 3.86SLSTYY308 pKa = 11.22SKK310 pKa = 10.64FQTPTSNMASSVLRR324 pKa = 11.84ATALINSDD332 pKa = 4.29SKK334 pKa = 11.24PSIPFDD340 pKa = 3.63SAPGQLSTCIQACKK354 pKa = 9.14KK355 pKa = 8.92TSNKK359 pKa = 9.89SGRR362 pKa = 11.84SKK364 pKa = 7.6TTRR367 pKa = 11.84SRR369 pKa = 11.84KK370 pKa = 9.13KK371 pKa = 10.83SKK373 pKa = 9.87ICTTKK378 pKa = 9.53RR379 pKa = 11.84RR380 pKa = 11.84SYY382 pKa = 10.98KK383 pKa = 9.58RR384 pKa = 11.84TGCACKK390 pKa = 10.52SPTRR394 pKa = 11.84PPSKK398 pKa = 10.25RR399 pKa = 11.84IRR401 pKa = 11.84KK402 pKa = 9.08VSAA405 pKa = 3.23

Molecular weight: 44.38 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1466

136

607

366.5

41.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.775 ± 0.657

1.705 ± 0.419

5.389 ± 0.238

5.116 ± 0.852

4.98 ± 0.665

5.73 ± 0.506

2.115 ± 0.59

6.617 ± 0.54

6.617 ± 1.228

6.821 ± 0.576

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.319 ± 0.215

6.617 ± 0.743

6.48 ± 1.594

2.865 ± 0.357

4.638 ± 0.434

8.868 ± 1.099

7.231 ± 0.849

5.935 ± 0.524

0.887 ± 0.039

4.297 ± 1.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski