Amino acid dipepetide frequency for Leptomonas moramango leishbunyavirus

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
3.651AlaAla: 3.651 ± 1.283
0.811AlaCys: 0.811 ± 1.965
0.406AlaAsp: 0.406 ± 0.207
4.057AlaGlu: 4.057 ± 1.367
3.651AlaPhe: 3.651 ± 2.588
3.245AlaGly: 3.245 ± 0.864
2.434AlaHis: 2.434 ± 1.2
2.84AlaIle: 2.84 ± 1.025
6.897AlaLys: 6.897 ± 1.583
6.897AlaLeu: 6.897 ± 3.712
0.811AlaMet: 0.811 ± 0.414
1.623AlaAsn: 1.623 ± 1.574
2.028AlaPro: 2.028 ± 0.646
1.623AlaGln: 1.623 ± 0.829
2.434AlaArg: 2.434 ± 1.2
6.085AlaSer: 6.085 ± 3.205
2.434AlaThr: 2.434 ± 1.243
3.651AlaVal: 3.651 ± 2.588
0.811AlaTrp: 0.811 ± 0.414
1.623AlaTyr: 1.623 ± 0.62
0.0AlaXaa: 0.0 ± 0.0
Cys
1.623CysAla: 1.623 ± 0.62
0.406CysCys: 0.406 ± 0.207
0.406CysAsp: 0.406 ± 0.207
0.811CysGlu: 0.811 ± 0.758
1.623CysPhe: 1.623 ± 0.829
0.0CysGly: 0.0 ± 0.0
0.811CysHis: 0.811 ± 0.414
2.028CysIle: 2.028 ± 1.408
2.434CysLys: 2.434 ± 1.2
2.84CysLeu: 2.84 ± 1.264
0.811CysMet: 0.811 ± 0.414
0.406CysAsn: 0.406 ± 0.894
0.0CysPro: 0.0 ± 0.0
0.811CysGln: 0.811 ± 0.414
1.623CysArg: 1.623 ± 2.312
0.811CysSer: 0.811 ± 0.414
0.811CysThr: 0.811 ± 0.414
0.0CysVal: 0.0 ± 0.0
0.0CysTrp: 0.0 ± 0.0
0.811CysTyr: 0.811 ± 0.758
0.0CysXaa: 0.0 ± 0.0
Asp
3.245AspAla: 3.245 ± 1.239
0.0AspCys: 0.0 ± 0.0
3.651AspAsp: 3.651 ± 1.277
2.434AspGlu: 2.434 ± 1.243
2.84AspPhe: 2.84 ± 1.21
1.623AspGly: 1.623 ± 1.517
2.028AspHis: 2.028 ± 1.036
3.245AspIle: 3.245 ± 1.015
1.217AspLys: 1.217 ± 0.621
5.274AspLeu: 5.274 ± 1.745
0.0AspMet: 0.0 ± 0.0
2.434AspAsn: 2.434 ± 2.275
4.462AspPro: 4.462 ± 0.862
1.217AspGln: 1.217 ± 0.621
2.84AspArg: 2.84 ± 1.264
6.491AspSer: 6.491 ± 0.938
1.217AspThr: 1.217 ± 1.458
3.651AspVal: 3.651 ± 1.248
1.623AspTrp: 1.623 ± 1.517
2.84AspTyr: 2.84 ± 0.86
0.0AspXaa: 0.0 ± 0.0
Glu
4.057GluAla: 4.057 ± 1.291
0.811GluCys: 0.811 ± 1.789
3.245GluAsp: 3.245 ± 1.657
4.462GluGlu: 4.462 ± 4.157
2.84GluPhe: 2.84 ± 2.9
3.651GluGly: 3.651 ± 1.864
0.406GluHis: 0.406 ± 0.207
4.868GluIle: 4.868 ± 1.747
3.651GluLys: 3.651 ± 2.62
5.274GluLeu: 5.274 ± 2.425
1.217GluMet: 1.217 ± 0.661
3.245GluAsn: 3.245 ± 1.23
4.868GluPro: 4.868 ± 1.859
1.217GluGln: 1.217 ± 0.661
4.462GluArg: 4.462 ± 2.279
4.462GluSer: 4.462 ± 1.365
5.68GluThr: 5.68 ± 0.85
4.462GluVal: 4.462 ± 2.49
1.217GluTrp: 1.217 ± 0.621
1.217GluTyr: 1.217 ± 1.768
0.0GluXaa: 0.0 ± 0.0
Phe
3.651PheAla: 3.651 ± 2.62
1.623PheCys: 1.623 ± 1.353
1.623PheAsp: 1.623 ± 1.574
4.462PheGlu: 4.462 ± 3.2
1.623PhePhe: 1.623 ± 1.517
2.84PheGly: 2.84 ± 0.86
0.406PheHis: 0.406 ± 0.207
0.811PheIle: 0.811 ± 0.414
2.028PheLys: 2.028 ± 1.274
4.868PheLeu: 4.868 ± 4.26
0.406PheMet: 0.406 ± 0.207
2.434PheAsn: 2.434 ± 1.243
1.217PhePro: 1.217 ± 1.458
1.623PheGln: 1.623 ± 0.829
2.434PheArg: 2.434 ± 0.732
4.868PheSer: 4.868 ± 2.486
2.434PheThr: 2.434 ± 1.243
4.057PheVal: 4.057 ± 2.072
1.623PheTrp: 1.623 ± 0.829
2.028PheTyr: 2.028 ± 1.036
0.0PheXaa: 0.0 ± 0.0
Gly
2.028GlyAla: 2.028 ± 1.274
1.217GlyCys: 1.217 ± 0.661
2.028GlyAsp: 2.028 ± 0.646
2.84GlyGlu: 2.84 ± 0.86
2.84GlyPhe: 2.84 ± 1.45
2.028GlyGly: 2.028 ± 0.646
0.406GlyHis: 0.406 ± 0.207
2.84GlyIle: 2.84 ± 1.45
2.84GlyLys: 2.84 ± 2.9
6.897GlyLeu: 6.897 ± 1.583
1.217GlyMet: 1.217 ± 1.645
1.623GlyAsn: 1.623 ± 0.829
3.245GlyPro: 3.245 ± 1.239
0.811GlyGln: 0.811 ± 0.414
2.028GlyArg: 2.028 ± 1.036
1.623GlySer: 1.623 ± 0.62
3.245GlyThr: 3.245 ± 1.484
1.623GlyVal: 1.623 ± 1.574
1.217GlyTrp: 1.217 ± 0.621
2.028GlyTyr: 2.028 ± 0.646
0.0GlyXaa: 0.0 ± 0.0
His
1.217HisAla: 1.217 ± 0.621
0.406HisCys: 0.406 ± 0.207
2.84HisAsp: 2.84 ± 1.264
2.434HisGlu: 2.434 ± 1.225
1.623HisPhe: 1.623 ± 0.62
1.217HisGly: 1.217 ± 0.621
0.406HisHis: 0.406 ± 0.207
0.811HisIle: 0.811 ± 1.583
1.217HisLys: 1.217 ± 0.621
3.245HisLeu: 3.245 ± 1.015
0.811HisMet: 0.811 ± 0.414
2.84HisAsn: 2.84 ± 1.025
1.217HisPro: 1.217 ± 0.621
0.406HisGln: 0.406 ± 0.207
1.623HisArg: 1.623 ± 0.62
3.245HisSer: 3.245 ± 1.657
1.623HisThr: 1.623 ± 0.829
0.811HisVal: 0.811 ± 0.414
0.811HisTrp: 0.811 ± 0.414
0.811HisTyr: 0.811 ± 0.414
0.0HisXaa: 0.0 ± 0.0
Ile
2.84IleAla: 2.84 ± 1.025
3.245IleCys: 3.245 ± 1.015
4.462IleAsp: 4.462 ± 1.365
2.028IleGlu: 2.028 ± 1.036
3.651IlePhe: 3.651 ± 0.727
4.868IleGly: 4.868 ± 1.464
2.84IleHis: 2.84 ± 0.86
2.028IleIle: 2.028 ± 1.036
2.434IleLys: 2.434 ± 1.225
5.274IleLeu: 5.274 ± 1.584
1.623IleMet: 1.623 ± 0.829
2.434IleAsn: 2.434 ± 1.243
4.057IlePro: 4.057 ± 1.291
2.434IleGln: 2.434 ± 1.243
5.274IleArg: 5.274 ± 2.578
7.302IleSer: 7.302 ± 3.332
4.057IleThr: 4.057 ± 1.291
4.057IleVal: 4.057 ± 6.073
1.217IleTrp: 1.217 ± 1.458
1.623IleTyr: 1.623 ± 0.829
0.0IleXaa: 0.0 ± 0.0
Lys
2.434LysAla: 2.434 ± 1.2
0.0LysCys: 0.0 ± 0.0
3.245LysAsp: 3.245 ± 3.813
5.274LysGlu: 5.274 ± 1.745
2.84LysPhe: 2.84 ± 1.21
2.84LysGly: 2.84 ± 1.691
2.028LysHis: 2.028 ± 1.385
8.925LysIle: 8.925 ± 6.445
2.84LysLys: 2.84 ± 1.45
8.114LysLeu: 8.114 ± 1.258
1.217LysMet: 1.217 ± 0.661
1.623LysAsn: 1.623 ± 0.62
2.028LysPro: 2.028 ± 1.274
2.84LysGln: 2.84 ± 0.86
2.434LysArg: 2.434 ± 1.243
3.651LysSer: 3.651 ± 1.186
3.651LysThr: 3.651 ± 1.186
1.623LysVal: 1.623 ± 0.829
1.623LysTrp: 1.623 ± 1.574
1.217LysTyr: 1.217 ± 0.621
0.0LysXaa: 0.0 ± 0.0
Leu
5.68LeuAla: 5.68 ± 5.608
3.245LeuCys: 3.245 ± 1.015
3.245LeuAsp: 3.245 ± 1.23
6.085LeuGlu: 6.085 ± 1.902
5.274LeuPhe: 5.274 ± 1.942
3.245LeuGly: 3.245 ± 1.657
3.651LeuHis: 3.651 ± 1.864
4.462LeuIle: 4.462 ± 2.723
8.519LeuLys: 8.519 ± 1.21
8.925LeuLeu: 8.925 ± 1.299
2.84LeuMet: 2.84 ± 2.403
4.868LeuAsn: 4.868 ± 1.747
5.274LeuPro: 5.274 ± 0.449
2.028LeuGln: 2.028 ± 0.646
6.491LeuArg: 6.491 ± 2.031
12.576LeuSer: 12.576 ± 2.191
3.651LeuThr: 3.651 ± 2.62
6.897LeuVal: 6.897 ± 2.76
0.406LeuTrp: 0.406 ± 0.207
2.434LeuTyr: 2.434 ± 1.322
0.0LeuXaa: 0.0 ± 0.0
Met
2.434MetAla: 2.434 ± 1.322
0.406MetCys: 0.406 ± 0.207
1.217MetAsp: 1.217 ± 0.621
2.434MetGlu: 2.434 ± 1.322
0.0MetPhe: 0.0 ± 0.0
0.811MetGly: 0.811 ± 0.758
0.811MetHis: 0.811 ± 0.414
2.028MetIle: 2.028 ± 1.036
0.811MetLys: 0.811 ± 0.414
1.623MetLeu: 1.623 ± 0.62
1.217MetMet: 1.217 ± 0.621
1.623MetAsn: 1.623 ± 0.829
0.406MetPro: 0.406 ± 0.207
0.811MetGln: 0.811 ± 0.414
2.028MetArg: 2.028 ± 1.408
1.217MetSer: 1.217 ± 0.621
0.406MetThr: 0.406 ± 1.724
0.811MetVal: 0.811 ± 1.583
0.0MetTrp: 0.0 ± 0.0
0.406MetTyr: 0.406 ± 0.207
0.0MetXaa: 0.0 ± 0.0
Asn
0.811AsnAla: 0.811 ± 1.583
0.811AsnCys: 0.811 ± 0.758
3.651AsnAsp: 3.651 ± 1.864
4.462AsnGlu: 4.462 ± 0.59
2.028AsnPhe: 2.028 ± 0.646
1.217AsnGly: 1.217 ± 1.458
0.406AsnHis: 0.406 ± 0.207
3.651AsnIle: 3.651 ± 1.277
2.84AsnLys: 2.84 ± 1.45
5.68AsnLeu: 5.68 ± 2.139
2.434AsnMet: 2.434 ± 1.243
2.028AsnAsn: 2.028 ± 1.036
0.811AsnPro: 0.811 ± 0.414
2.434AsnGln: 2.434 ± 1.2
1.217AsnArg: 1.217 ± 0.621
2.434AsnSer: 2.434 ± 1.243
2.434AsnThr: 2.434 ± 1.898
2.84AsnVal: 2.84 ± 0.86
1.217AsnTrp: 1.217 ± 0.621
2.84AsnTyr: 2.84 ± 3.158
0.0AsnXaa: 0.0 ± 0.0
Pro
2.84ProAla: 2.84 ± 1.21
1.217ProCys: 1.217 ± 0.621
3.245ProAsp: 3.245 ± 2.064
2.84ProGlu: 2.84 ± 1.025
1.217ProPhe: 1.217 ± 3.304
2.028ProGly: 2.028 ± 0.646
2.028ProHis: 2.028 ± 0.646
4.462ProIle: 4.462 ± 2.279
0.406ProLys: 0.406 ± 0.207
3.651ProLeu: 3.651 ± 0.727
0.0ProMet: 0.0 ± 0.0
2.028ProAsn: 2.028 ± 0.646
1.623ProPro: 1.623 ± 0.62
2.028ProGln: 2.028 ± 1.036
2.028ProArg: 2.028 ± 0.646
4.462ProSer: 4.462 ± 2.723
2.028ProThr: 2.028 ± 0.646
3.651ProVal: 3.651 ± 1.982
0.406ProTrp: 0.406 ± 0.207
3.651ProTyr: 3.651 ± 1.248
0.0ProXaa: 0.0 ± 0.0
Gln
3.245GlnAla: 3.245 ± 1.015
0.406GlnCys: 0.406 ± 0.894
1.217GlnAsp: 1.217 ± 0.661
2.434GlnGlu: 2.434 ± 1.243
1.623GlnPhe: 1.623 ± 0.829
2.028GlnGly: 2.028 ± 1.274
0.811GlnHis: 0.811 ± 0.414
3.651GlnIle: 3.651 ± 1.186
1.217GlnLys: 1.217 ± 0.621
2.84GlnLeu: 2.84 ± 0.86
0.406GlnMet: 0.406 ± 0.193
1.217GlnAsn: 1.217 ± 0.661
1.217GlnPro: 1.217 ± 0.621
2.434GlnGln: 2.434 ± 0.732
1.623GlnArg: 1.623 ± 0.62
2.434GlnSer: 2.434 ± 0.732
2.434GlnThr: 2.434 ± 0.732
1.623GlnVal: 1.623 ± 0.829
0.406GlnTrp: 0.406 ± 0.207
1.623GlnTyr: 1.623 ± 0.829
0.0GlnXaa: 0.0 ± 0.0
Arg
3.245ArgAla: 3.245 ± 1.239
0.406ArgCys: 0.406 ± 0.894
3.651ArgAsp: 3.651 ± 1.186
4.057ArgGlu: 4.057 ± 0.629
3.651ArgPhe: 3.651 ± 1.864
3.245ArgGly: 3.245 ± 1.23
0.811ArgHis: 0.811 ± 0.758
4.057ArgIle: 4.057 ± 0.629
2.434ArgLys: 2.434 ± 1.2
5.274ArgLeu: 5.274 ± 1.942
1.217ArgMet: 1.217 ± 0.621
2.434ArgAsn: 2.434 ± 0.732
0.406ArgPro: 0.406 ± 0.894
2.028ArgGln: 2.028 ± 2.401
2.028ArgArg: 2.028 ± 1.408
3.651ArgSer: 3.651 ± 1.248
3.245ArgThr: 3.245 ± 1.23
3.245ArgVal: 3.245 ± 1.015
0.406ArgTrp: 0.406 ± 0.207
1.217ArgTyr: 1.217 ± 0.661
0.0ArgXaa: 0.0 ± 0.0
Ser
5.274SerAla: 5.274 ± 1.745
2.028SerCys: 2.028 ± 0.646
3.651SerAsp: 3.651 ± 1.248
6.491SerGlu: 6.491 ± 0.176
2.028SerPhe: 2.028 ± 2.105
3.245SerGly: 3.245 ± 1.239
3.245SerHis: 3.245 ± 1.657
4.057SerIle: 4.057 ± 0.629
6.085SerLys: 6.085 ± 1.937
8.114SerLeu: 8.114 ± 1.003
1.217SerMet: 1.217 ± 0.616
6.897SerAsn: 6.897 ± 2.199
4.868SerPro: 4.868 ± 0.655
3.651SerGln: 3.651 ± 1.186
5.68SerArg: 5.68 ± 0.85
12.982SerSer: 12.982 ± 0.352
5.68SerThr: 5.68 ± 0.242
5.274SerVal: 5.274 ± 2.074
1.623SerTrp: 1.623 ± 0.62
3.651SerTyr: 3.651 ± 1.248
0.0SerXaa: 0.0 ± 0.0
Thr
1.217ThrAla: 1.217 ± 0.661
0.406ThrCys: 0.406 ± 0.207
2.434ThrAsp: 2.434 ± 1.243
1.217ThrGlu: 1.217 ± 0.621
2.84ThrPhe: 2.84 ± 1.45
2.84ThrGly: 2.84 ± 1.264
4.057ThrHis: 4.057 ± 0.629
7.302ThrIle: 7.302 ± 3.729
4.462ThrLys: 4.462 ± 4.166
6.491ThrLeu: 6.491 ± 0.176
1.623ThrMet: 1.623 ± 0.62
1.623ThrAsn: 1.623 ± 3.166
3.245ThrPro: 3.245 ± 1.015
1.623ThrGln: 1.623 ± 0.829
2.028ThrArg: 2.028 ± 3.037
4.057ThrSer: 4.057 ± 2.028
3.651ThrThr: 3.651 ± 1.186
0.811ThrVal: 0.811 ± 0.758
0.811ThrTrp: 0.811 ± 0.414
0.811ThrTyr: 0.811 ± 0.414
0.0ThrXaa: 0.0 ± 0.0
Val
4.462ValAla: 4.462 ± 5.95
0.0ValCys: 0.0 ± 0.0
4.868ValAsp: 4.868 ± 2.643
3.245ValGlu: 3.245 ± 1.23
2.84ValPhe: 2.84 ± 1.21
2.84ValGly: 2.84 ± 2.9
0.811ValHis: 0.811 ± 0.414
3.245ValIle: 3.245 ± 1.484
2.84ValLys: 2.84 ± 1.45
4.868ValLeu: 4.868 ± 1.859
0.811ValMet: 0.811 ± 0.414
2.028ValAsn: 2.028 ± 1.274
2.84ValPro: 2.84 ± 1.264
1.623ValGln: 1.623 ± 0.829
2.028ValArg: 2.028 ± 1.036
6.491ValSer: 6.491 ± 1.846
2.84ValThr: 2.84 ± 1.025
3.651ValVal: 3.651 ± 2.225
0.0ValTrp: 0.0 ± 0.0
2.434ValTyr: 2.434 ± 1.2
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.811TrpCys: 0.811 ± 0.414
0.811TrpAsp: 0.811 ± 0.414
0.811TrpGlu: 0.811 ± 0.414
0.811TrpPhe: 0.811 ± 0.414
0.0TrpGly: 0.0 ± 0.0
0.0TrpHis: 0.0 ± 0.0
0.811TrpIle: 0.811 ± 0.758
1.217TrpLys: 1.217 ± 1.458
1.623TrpLeu: 1.623 ± 1.353
0.0TrpMet: 0.0 ± 0.0
1.217TrpAsn: 1.217 ± 0.621
0.406TrpPro: 0.406 ± 0.207
1.623TrpGln: 1.623 ± 0.829
0.0TrpArg: 0.0 ± 0.0
2.84TrpSer: 2.84 ± 0.86
0.811TrpThr: 0.811 ± 0.414
0.811TrpVal: 0.811 ± 0.414
0.811TrpTrp: 0.811 ± 0.414
1.623TrpTyr: 1.623 ± 1.517
0.0TrpXaa: 0.0 ± 0.0
Tyr
4.057TyrAla: 4.057 ± 2.815
0.811TyrCys: 0.811 ± 0.758
2.434TyrAsp: 2.434 ± 1.225
2.434TyrGlu: 2.434 ± 0.732
1.217TyrPhe: 1.217 ± 0.621
0.811TyrGly: 0.811 ± 0.414
1.217TyrHis: 1.217 ± 0.621
1.623TyrIle: 1.623 ± 0.62
4.057TyrLys: 4.057 ± 4.088
2.028TyrLeu: 2.028 ± 1.408
1.217TyrMet: 1.217 ± 0.661
1.623TyrAsn: 1.623 ± 0.62
1.623TyrPro: 1.623 ± 0.62
1.623TyrGln: 1.623 ± 0.62
0.406TyrArg: 0.406 ± 0.207
4.462TyrSer: 4.462 ± 1.555
1.217TyrThr: 1.217 ± 0.621
1.217TyrVal: 1.217 ± 0.621
0.811TyrTrp: 0.811 ± 0.414
0.811TyrTyr: 0.811 ± 0.758
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 3 proteins (2466 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski