Solobacterium moorei F0204

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Solobacterium; Solobacterium moorei

Average proteome isoelectric point is 6.27

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2034 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|E7MP29|E7MP29_9FIRM NTP_transferase domain-containing protein OS=Solobacterium moorei F0204 OX=706433 GN=HMPREF9430_01301 PE=4 SV=1
MM1 pKa = 7.68KK2 pKa = 9.98IYY4 pKa = 10.09IVHH7 pKa = 6.44EE8 pKa = 4.29NGGEE12 pKa = 4.54YY13 pKa = 10.07EE14 pKa = 4.64DD15 pKa = 3.98EE16 pKa = 3.93WDD18 pKa = 4.19NILGAFTTLEE28 pKa = 4.03KK29 pKa = 10.83AQEE32 pKa = 3.97LKK34 pKa = 10.71DD35 pKa = 3.85RR36 pKa = 11.84KK37 pKa = 10.05EE38 pKa = 4.15KK39 pKa = 11.19EE40 pKa = 3.47NDD42 pKa = 3.13EE43 pKa = 4.19YY44 pKa = 11.63SEE46 pKa = 4.25KK47 pKa = 10.98VEE49 pKa = 4.22LACRR53 pKa = 11.84VQNEE57 pKa = 4.7EE58 pKa = 3.65ITLEE62 pKa = 3.88QSGLSEE68 pKa = 4.45EE69 pKa = 4.83EE70 pKa = 4.07YY71 pKa = 10.84EE72 pKa = 5.17SYY74 pKa = 10.92CEE76 pKa = 5.08CDD78 pKa = 3.08FDD80 pKa = 6.61DD81 pKa = 3.91YY82 pKa = 11.75VNYY85 pKa = 10.76YY86 pKa = 7.74ITQITLDD93 pKa = 3.49KK94 pKa = 10.32EE95 pKa = 4.35SRR97 pKa = 11.84EE98 pKa = 3.87EE99 pKa = 4.09SVNLNGASS107 pKa = 3.23

Molecular weight: 12.58 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|E7MLL4|E7MLL4_9FIRM Uncharacterized protein OS=Solobacterium moorei F0204 OX=706433 GN=HMPREF9430_00426 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.43RR3 pKa = 11.84TYY5 pKa = 10.38QPSKK9 pKa = 10.14KK10 pKa = 9.69KK11 pKa = 10.67NKK13 pKa = 7.99ATHH16 pKa = 6.03GFRR19 pKa = 11.84ARR21 pKa = 11.84MATVGGRR28 pKa = 11.84KK29 pKa = 9.25VINRR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 9.72GRR39 pKa = 11.84KK40 pKa = 8.67VLSAA44 pKa = 4.05

Molecular weight: 5.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2034

0

2034

612376

37

2915

301.1

33.98

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.846 ± 0.052

1.251 ± 0.022

5.71 ± 0.049

6.92 ± 0.065

4.317 ± 0.047

6.315 ± 0.053

2.085 ± 0.024

8.309 ± 0.057

7.271 ± 0.05

9.058 ± 0.058

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.994 ± 0.024

4.98 ± 0.039

3.05 ± 0.024

3.484 ± 0.032

3.863 ± 0.037

5.905 ± 0.037

5.687 ± 0.035

6.751 ± 0.048

0.876 ± 0.02

4.33 ± 0.041
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski