Beihai weivirus-like virus 2

Taxonomy: Viruses; Riboviria; unclassified Riboviria; unclassified RNA viruses ShiM-2016

Average proteome isoelectric point is 6.88

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L3KL03|A0A1L3KL03_9VIRU RNA-dependent RNA polymerase OS=Beihai weivirus-like virus 2 OX=1922748 PE=4 SV=1
MM1 pKa = 7.31LQGDD5 pKa = 4.29VANTPALALVGTQPPPGLSTCSVRR29 pKa = 11.84QTGVLGGVHH38 pKa = 6.63ARR40 pKa = 11.84TAGRR44 pKa = 11.84NIPGPVPGSPAWLVWVHH61 pKa = 6.38DD62 pKa = 4.7HH63 pKa = 7.18FDD65 pKa = 3.71HH66 pKa = 7.85PDD68 pKa = 3.5GEE70 pKa = 5.1GVRR73 pKa = 11.84EE74 pKa = 3.76THH76 pKa = 6.29GRR78 pKa = 11.84GEE80 pKa = 4.15AARR83 pKa = 11.84HH84 pKa = 5.45GEE86 pKa = 4.34GEE88 pKa = 4.34GSSVAGSSQHH98 pKa = 6.38RR99 pKa = 11.84GQRR102 pKa = 11.84TLEE105 pKa = 3.85DD106 pKa = 3.17RR107 pKa = 11.84EE108 pKa = 4.03YY109 pKa = 9.37RR110 pKa = 11.84TCGTQVFGTGHH121 pKa = 7.09DD122 pKa = 3.63NPRR125 pKa = 11.84GQGVEE130 pKa = 4.12HH131 pKa = 6.81NGHH134 pKa = 6.22HH135 pKa = 6.42RR136 pKa = 11.84RR137 pKa = 11.84PSFIAYY143 pKa = 9.72DD144 pKa = 3.54IVVHH148 pKa = 6.88DD149 pKa = 4.9FGIPPARR156 pKa = 11.84VGSLADD162 pKa = 3.3GHH164 pKa = 5.62VAPTVGEE171 pKa = 4.07QTILEE176 pKa = 4.39AASDD180 pKa = 3.76AGDD183 pKa = 3.33VDD185 pKa = 3.95GEE187 pKa = 4.39RR188 pKa = 11.84VQGGARR194 pKa = 11.84EE195 pKa = 3.99AAVGGGQPWEE205 pKa = 4.1AGLRR209 pKa = 11.84LARR212 pKa = 11.84GRR214 pKa = 11.84LGGQTDD220 pKa = 3.93DD221 pKa = 4.35EE222 pKa = 6.1DD223 pKa = 5.43DD224 pKa = 4.27GFVGARR230 pKa = 11.84WMGCMVWSSGVHH242 pKa = 4.95GHH244 pKa = 7.34DD245 pKa = 4.66EE246 pKa = 4.52VPCDD250 pKa = 3.83DD251 pKa = 5.1LLSEE255 pKa = 4.26THH257 pKa = 6.56ASARR261 pKa = 11.84LLEE264 pKa = 4.44RR265 pKa = 11.84TDD267 pKa = 3.51SQFHH271 pKa = 6.22FGWW274 pKa = 4.47

Molecular weight: 28.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L3KL47|A0A1L3KL47_9VIRU Putative capsid protein OS=Beihai weivirus-like virus 2 OX=1922748 PE=4 SV=1
MM1 pKa = 7.55AKK3 pKa = 10.18KK4 pKa = 9.76FVKK7 pKa = 10.26KK8 pKa = 10.4LPQRR12 pKa = 11.84RR13 pKa = 11.84RR14 pKa = 11.84RR15 pKa = 11.84PVIKK19 pKa = 10.17RR20 pKa = 11.84NMKK23 pKa = 8.84ATRR26 pKa = 11.84SHH28 pKa = 6.05ATRR31 pKa = 11.84VLAQGAGAITKK42 pKa = 9.97KK43 pKa = 10.85AFGAGKK49 pKa = 8.52KK50 pKa = 4.91TTTWRR55 pKa = 11.84MALRR59 pKa = 11.84RR60 pKa = 11.84GLNARR65 pKa = 11.84LPYY68 pKa = 10.31HH69 pKa = 6.99LGLPRR74 pKa = 11.84PVGPYY79 pKa = 9.52QVIRR83 pKa = 11.84TTKK86 pKa = 9.98LHH88 pKa = 5.24STSARR93 pKa = 11.84VVVFCPLMQKK103 pKa = 9.86WNGQDD108 pKa = 3.43DD109 pKa = 3.85APRR112 pKa = 11.84WFEE115 pKa = 3.66ACGIEE120 pKa = 5.86DD121 pKa = 3.57VDD123 pKa = 3.66ATKK126 pKa = 10.41PINDD130 pKa = 3.58ATGNAHH136 pKa = 6.87MIGMPLTGIGSAAEE150 pKa = 4.03VVPAAMTVQVMCSDD164 pKa = 4.8PLQTAQGIFTMGRR177 pKa = 11.84VSQQLPLGGEE187 pKa = 4.05TRR189 pKa = 11.84SWDD192 pKa = 3.55TFKK195 pKa = 10.32TQFDD199 pKa = 4.36AYY201 pKa = 10.05FKK203 pKa = 10.74PRR205 pKa = 11.84LLTGGKK211 pKa = 9.25LALRR215 pKa = 11.84GVTCNAIPLNMNEE228 pKa = 4.03FSEE231 pKa = 4.8FASPQAAEE239 pKa = 5.38NNFIWNDD246 pKa = 3.7TVVPAALSPIVFTKK260 pKa = 10.83DD261 pKa = 2.88PGEE264 pKa = 4.29VGSSITFLVTIEE276 pKa = 3.6WRR278 pKa = 11.84VRR280 pKa = 11.84FDD282 pKa = 3.6PFHH285 pKa = 6.87PAAASHH291 pKa = 6.21TFHH294 pKa = 7.55PSTPDD299 pKa = 3.36SLWNRR304 pKa = 11.84VIGAASSMGHH314 pKa = 5.18GVEE317 pKa = 5.65DD318 pKa = 3.61IADD321 pKa = 3.78EE322 pKa = 4.24VAEE325 pKa = 4.62LGADD329 pKa = 3.34AAAAAVVGALAFF341 pKa = 4.18

Molecular weight: 36.95 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1576

274

961

525.3

57.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.025 ± 0.988

1.396 ± 0.077

5.393 ± 0.595

6.853 ± 1.332

3.871 ± 0.472

9.581 ± 2.098

2.728 ± 1.099

3.68 ± 0.566

4.759 ± 1.537

7.551 ± 0.731

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.728 ± 0.498

2.538 ± 0.401

5.901 ± 0.306

3.68 ± 0.215

7.043 ± 0.316

5.33 ± 0.118

6.028 ± 0.55

7.234 ± 0.573

2.284 ± 0.102

1.396 ± 0.341
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski