Human fecal virus Jorvi2

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cirlivirales; Circoviridae; unclassified Circoviridae

Average proteome isoelectric point is 6.11

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A220IGC9|A0A220IGC9_9CIRC Uncharacterized protein OS=Human fecal virus Jorvi2 OX=2017081 PE=4 SV=1
MM1 pKa = 7.52LFDD4 pKa = 5.81DD5 pKa = 4.36NDD7 pKa = 4.1YY8 pKa = 10.69YY9 pKa = 11.73DD10 pKa = 5.55HH11 pKa = 7.49IFGPDD16 pKa = 3.29DD17 pKa = 3.39STNDD21 pKa = 3.21FNFNFDD27 pKa = 4.25DD28 pKa = 5.18FISNEE33 pKa = 4.31PINDD37 pKa = 4.18NIDD40 pKa = 4.05TIPDD44 pKa = 3.56DD45 pKa = 3.96TTPEE49 pKa = 3.9IDD51 pKa = 4.6SIPPNPLPPPSNSDD65 pKa = 2.93SVAYY69 pKa = 10.58YY70 pKa = 10.74FEE72 pKa = 6.83DD73 pKa = 3.62YY74 pKa = 9.51TQLKK78 pKa = 9.86EE79 pKa = 4.14YY80 pKa = 10.71VKK82 pKa = 10.56LYY84 pKa = 9.47YY85 pKa = 10.93NNVRR89 pKa = 11.84NHH91 pKa = 6.55YY92 pKa = 10.15ILLPVDD98 pKa = 4.8AIGAIRR104 pKa = 11.84VDD106 pKa = 3.3RR107 pKa = 11.84RR108 pKa = 11.84RR109 pKa = 11.84RR110 pKa = 11.84SYY112 pKa = 11.48SNYY115 pKa = 9.98LIPPSCILLPHH126 pKa = 6.97PP127 pKa = 4.94

Molecular weight: 14.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A220IGC8|A0A220IGC8_9CIRC Uncharacterized protein OS=Human fecal virus Jorvi2 OX=2017081 PE=4 SV=1
MM1 pKa = 7.02ARR3 pKa = 11.84KK4 pKa = 8.76YY5 pKa = 10.59KK6 pKa = 10.16KK7 pKa = 9.95VYY9 pKa = 9.93GSRR12 pKa = 11.84RR13 pKa = 11.84PLKK16 pKa = 8.08TVKK19 pKa = 10.5YY20 pKa = 10.46SNEE23 pKa = 3.86TSNITSSFSITQGGQLNASLVTASSIQGIRR53 pKa = 11.84KK54 pKa = 9.22AKK56 pKa = 10.1NFSLKK61 pKa = 10.04ILYY64 pKa = 10.14AGSAPLMFVLVYY76 pKa = 10.11VPQGQDD82 pKa = 2.44VKK84 pKa = 11.13AITRR88 pKa = 11.84GTYY91 pKa = 7.3TAPASLYY98 pKa = 10.16EE99 pKa = 4.23PNQNVIMSGYY109 pKa = 9.41IVPNNSQAQTFRR121 pKa = 11.84TRR123 pKa = 11.84LARR126 pKa = 11.84NLNSGDD132 pKa = 3.92SIQIAICCAGASDD145 pKa = 4.18TVTDD149 pKa = 4.12ANIGISLNYY158 pKa = 10.39AITFF162 pKa = 3.98

Molecular weight: 17.52 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

938

116

312

187.6

21.64

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.691 ± 1.05

1.173 ± 0.458

6.397 ± 1.684

5.224 ± 1.211

4.904 ± 0.677

4.264 ± 0.865

1.599 ± 0.477

7.676 ± 0.716

6.503 ± 1.659

7.889 ± 0.343

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.706 ± 0.401

7.569 ± 0.517

5.011 ± 1.313

2.985 ± 0.574

3.945 ± 0.464

7.783 ± 1.232

7.783 ± 1.657

4.797 ± 0.562

2.026 ± 1.006

6.077 ± 0.609
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski