Rhinopithecus roxellana (Golden snub-nosed monkey) (Pygathrix roxellana)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Sarcopterygii; Dipnotetrapodomorpha; Tetrapoda; Amniota; Mammalia; Theria; Eutheria; Boreoeutheria; Euarchontoglires; Primates;

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 44577 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A2K6RK38|A0A2K6RK38_RHIRO 40S ribosomal protein S9 OS=Rhinopithecus roxellana OX=61622 PE=3 SV=1
MM1 pKa = 7.51SFLKK5 pKa = 10.56SFPPPGPAEE14 pKa = 4.1GLLWQQPDD22 pKa = 3.61TEE24 pKa = 4.45AVLNGKK30 pKa = 8.91GLGTGTLYY38 pKa = 10.36IAEE41 pKa = 4.77SRR43 pKa = 11.84LSWLDD48 pKa = 3.16GSGLGFSLEE57 pKa = 4.09YY58 pKa = 9.04PTISLHH64 pKa = 5.94ALSRR68 pKa = 11.84DD69 pKa = 3.33RR70 pKa = 11.84SDD72 pKa = 4.01CLGEE76 pKa = 3.91HH77 pKa = 7.02LYY79 pKa = 11.73VMVNAKK85 pKa = 10.28FEE87 pKa = 4.38EE88 pKa = 4.69EE89 pKa = 4.23SKK91 pKa = 10.66EE92 pKa = 3.94PAMFTAMCEE101 pKa = 4.33CQALHH106 pKa = 7.39PDD108 pKa = 4.25PEE110 pKa = 6.21DD111 pKa = 4.16EE112 pKa = 6.53DD113 pKa = 5.1SDD115 pKa = 5.45DD116 pKa = 4.29YY117 pKa = 11.95DD118 pKa = 4.07GEE120 pKa = 4.56EE121 pKa = 4.23YY122 pKa = 10.88DD123 pKa = 4.24GDD125 pKa = 3.54IPTFYY130 pKa = 9.98TYY132 pKa = 11.09EE133 pKa = 4.17EE134 pKa = 4.62GLSHH138 pKa = 6.9LTAEE142 pKa = 4.71GQATLEE148 pKa = 4.16RR149 pKa = 11.84LEE151 pKa = 4.8GMLSQSVSSQYY162 pKa = 11.68NMAGVRR168 pKa = 11.84TEE170 pKa = 4.12DD171 pKa = 3.21SVRR174 pKa = 11.84DD175 pKa = 3.8YY176 pKa = 11.43EE177 pKa = 5.89DD178 pKa = 3.4GMEE181 pKa = 4.14VDD183 pKa = 3.82TTPTVAGQFEE193 pKa = 4.58DD194 pKa = 4.85ADD196 pKa = 3.71VDD198 pKa = 3.98HH199 pKa = 7.2

Molecular weight: 21.96 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A2K6Q292|A0A2K6Q292_RHIRO Uncharacterized protein OS=Rhinopithecus roxellana OX=61622 GN=LSMEM1 PE=4 SV=1
MM1 pKa = 7.1RR2 pKa = 11.84AKK4 pKa = 9.12WRR6 pKa = 11.84KK7 pKa = 9.1KK8 pKa = 9.32RR9 pKa = 11.84MRR11 pKa = 11.84RR12 pKa = 11.84LKK14 pKa = 10.08RR15 pKa = 11.84KK16 pKa = 8.21RR17 pKa = 11.84RR18 pKa = 11.84KK19 pKa = 8.46MRR21 pKa = 11.84QRR23 pKa = 11.84SKK25 pKa = 11.41

Molecular weight: 3.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

21114

23463

44577

23994639

12

34273

538.3

59.99

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.871 ± 0.015

2.188 ± 0.009

4.877 ± 0.008

7.235 ± 0.016

3.602 ± 0.008

6.441 ± 0.017

2.595 ± 0.008

4.415 ± 0.011

5.892 ± 0.017

9.842 ± 0.02

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.165 ± 0.006

3.666 ± 0.01

6.167 ± 0.018

4.813 ± 0.015

5.618 ± 0.011

8.294 ± 0.015

5.332 ± 0.012

6.031 ± 0.014

1.2 ± 0.004

2.651 ± 0.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski