Amino acid dipepetide frequency for Luna mammarenavirus

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
1.701AlaAla: 1.701 ± 0.787
1.701AlaCys: 1.701 ± 0.787
0.0AlaAsp: 0.0 ± 0.0
3.401AlaGlu: 3.401 ± 1.573
0.0AlaPhe: 0.0 ± 0.0
1.701AlaGly: 1.701 ± 0.787
5.102AlaHis: 5.102 ± 2.384
5.102AlaIle: 5.102 ± 2.36
1.701AlaLys: 1.701 ± 0.787
0.0AlaLeu: 0.0 ± 0.0
1.701AlaMet: 1.701 ± 0.787
5.102AlaAsn: 5.102 ± 2.36
1.701AlaPro: 1.701 ± 3.957
1.701AlaGln: 1.701 ± 0.787
0.0AlaArg: 0.0 ± 0.0
1.701AlaSer: 1.701 ± 3.957
1.701AlaThr: 1.701 ± 0.787
3.401AlaVal: 3.401 ± 1.573
0.0AlaTrp: 0.0 ± 0.0
0.0AlaTyr: 0.0 ± 0.0
0.0AlaXaa: 0.0 ± 0.0
Cys
0.0CysAla: 0.0 ± 0.0
0.0CysCys: 0.0 ± 0.0
3.401CysAsp: 3.401 ± 1.573
0.0CysGlu: 0.0 ± 0.0
1.701CysPhe: 1.701 ± 0.787
6.803CysGly: 6.803 ± 3.146
1.701CysHis: 1.701 ± 3.957
1.701CysIle: 1.701 ± 0.787
3.401CysLys: 3.401 ± 7.914
3.401CysLeu: 3.401 ± 3.17
1.701CysMet: 1.701 ± 3.957
5.102CysAsn: 5.102 ± 2.36
3.401CysPro: 3.401 ± 3.17
1.701CysGln: 1.701 ± 0.787
0.0CysArg: 0.0 ± 0.0
5.102CysSer: 5.102 ± 2.36
0.0CysThr: 0.0 ± 0.0
0.0CysVal: 0.0 ± 0.0
3.401CysTrp: 3.401 ± 3.17
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
5.102AspAla: 5.102 ± 2.384
0.0AspCys: 0.0 ± 0.0
0.0AspAsp: 0.0 ± 0.0
3.401AspGlu: 3.401 ± 1.573
3.401AspPhe: 3.401 ± 1.573
0.0AspGly: 0.0 ± 0.0
5.102AspHis: 5.102 ± 2.384
0.0AspIle: 0.0 ± 0.0
0.0AspLys: 0.0 ± 0.0
3.401AspLeu: 3.401 ± 1.573
3.401AspMet: 3.401 ± 1.573
1.701AspAsn: 1.701 ± 3.957
1.701AspPro: 1.701 ± 0.787
1.701AspGln: 1.701 ± 0.787
1.701AspArg: 1.701 ± 3.957
3.401AspSer: 3.401 ± 1.573
6.803AspThr: 6.803 ± 3.146
0.0AspVal: 0.0 ± 0.0
0.0AspTrp: 0.0 ± 0.0
0.0AspTyr: 0.0 ± 0.0
0.0AspXaa: 0.0 ± 0.0
Glu
8.503GluAla: 8.503 ± 3.933
0.0GluCys: 0.0 ± 0.0
1.701GluAsp: 1.701 ± 0.787
6.803GluGlu: 6.803 ± 3.146
3.401GluPhe: 3.401 ± 3.17
0.0GluGly: 0.0 ± 0.0
0.0GluHis: 0.0 ± 0.0
1.701GluIle: 1.701 ± 0.787
3.401GluLys: 3.401 ± 1.573
5.102GluLeu: 5.102 ± 2.36
3.401GluMet: 3.401 ± 1.573
0.0GluAsn: 0.0 ± 0.0
1.701GluPro: 1.701 ± 3.957
0.0GluGln: 0.0 ± 0.0
1.701GluArg: 1.701 ± 3.957
0.0GluSer: 0.0 ± 0.0
3.401GluThr: 3.401 ± 3.17
3.401GluVal: 3.401 ± 1.573
0.0GluTrp: 0.0 ± 0.0
1.701GluTyr: 1.701 ± 0.787
0.0GluXaa: 0.0 ± 0.0
Phe
0.0PheAla: 0.0 ± 0.0
5.102PheCys: 5.102 ± 2.384
1.701PheAsp: 1.701 ± 0.787
1.701PheGlu: 1.701 ± 3.957
1.701PhePhe: 1.701 ± 0.787
1.701PheGly: 1.701 ± 0.787
1.701PheHis: 1.701 ± 0.787
0.0PheIle: 0.0 ± 0.0
0.0PheLys: 0.0 ± 0.0
5.102PheLeu: 5.102 ± 2.36
0.0PheMet: 0.0 ± 0.0
6.803PheAsn: 6.803 ± 3.146
1.701PhePro: 1.701 ± 0.787
3.401PheGln: 3.401 ± 1.573
1.701PheArg: 1.701 ± 0.787
3.401PheSer: 3.401 ± 1.573
1.701PheThr: 1.701 ± 0.787
1.701PheVal: 1.701 ± 0.787
1.701PheTrp: 1.701 ± 0.787
1.701PheTyr: 1.701 ± 0.787
0.0PheXaa: 0.0 ± 0.0
Gly
0.0GlyAla: 0.0 ± 0.0
1.701GlyCys: 1.701 ± 0.787
0.0GlyAsp: 0.0 ± 0.0
0.0GlyGlu: 0.0 ± 0.0
0.0GlyPhe: 0.0 ± 0.0
3.401GlyGly: 3.401 ± 1.573
1.701GlyHis: 1.701 ± 3.957
1.701GlyIle: 1.701 ± 0.787
5.102GlyLys: 5.102 ± 2.384
11.905GlyLeu: 11.905 ± 0.762
0.0GlyMet: 0.0 ± 0.0
3.401GlyAsn: 3.401 ± 1.573
3.401GlyPro: 3.401 ± 3.17
1.701GlyGln: 1.701 ± 0.787
3.401GlyArg: 3.401 ± 1.573
1.701GlySer: 1.701 ± 0.787
3.401GlyThr: 3.401 ± 1.573
3.401GlyVal: 3.401 ± 1.573
0.0GlyTrp: 0.0 ± 0.0
3.401GlyTyr: 3.401 ± 1.573
0.0GlyXaa: 0.0 ± 0.0
His
0.0HisAla: 0.0 ± 0.0
3.401HisCys: 3.401 ± 1.573
3.401HisAsp: 3.401 ± 3.17
1.701HisGlu: 1.701 ± 3.957
3.401HisPhe: 3.401 ± 1.573
1.701HisGly: 1.701 ± 3.957
1.701HisHis: 1.701 ± 0.787
3.401HisIle: 3.401 ± 1.573
3.401HisLys: 3.401 ± 1.573
5.102HisLeu: 5.102 ± 2.36
1.701HisMet: 1.701 ± 0.787
0.0HisAsn: 0.0 ± 0.0
1.701HisPro: 1.701 ± 3.957
0.0HisGln: 0.0 ± 0.0
3.401HisArg: 3.401 ± 1.573
1.701HisSer: 1.701 ± 0.787
1.701HisThr: 1.701 ± 0.787
0.0HisVal: 0.0 ± 0.0
1.701HisTrp: 1.701 ± 0.787
3.401HisTyr: 3.401 ± 3.17
0.0HisXaa: 0.0 ± 0.0
Ile
1.701IleAla: 1.701 ± 0.787
3.401IleCys: 3.401 ± 3.17
0.0IleAsp: 0.0 ± 0.0
6.803IleGlu: 6.803 ± 1.597
1.701IlePhe: 1.701 ± 0.787
1.701IleGly: 1.701 ± 0.787
0.0IleHis: 0.0 ± 0.0
5.102IleIle: 5.102 ± 2.36
1.701IleLys: 1.701 ± 0.787
1.701IleLeu: 1.701 ± 0.787
0.0IleMet: 0.0 ± 0.0
6.803IleAsn: 6.803 ± 3.146
5.102IlePro: 5.102 ± 2.36
5.102IleGln: 5.102 ± 2.36
1.701IleArg: 1.701 ± 0.787
6.803IleSer: 6.803 ± 1.597
8.503IleThr: 8.503 ± 3.933
5.102IleVal: 5.102 ± 2.36
0.0IleTrp: 0.0 ± 0.0
0.0IleTyr: 0.0 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
1.701LysAla: 1.701 ± 0.787
6.803LysCys: 6.803 ± 1.597
1.701LysAsp: 1.701 ± 0.787
3.401LysGlu: 3.401 ± 1.573
3.401LysPhe: 3.401 ± 1.573
3.401LysGly: 3.401 ± 1.573
0.0LysHis: 0.0 ± 0.0
3.401LysIle: 3.401 ± 1.573
0.0LysLys: 0.0 ± 0.0
1.701LysLeu: 1.701 ± 3.957
0.0LysMet: 0.0 ± 0.0
3.401LysAsn: 3.401 ± 3.17
1.701LysPro: 1.701 ± 0.787
1.701LysGln: 1.701 ± 0.787
5.102LysArg: 5.102 ± 2.36
5.102LysSer: 5.102 ± 7.127
1.701LysThr: 1.701 ± 3.957
1.701LysVal: 1.701 ± 0.787
0.0LysTrp: 0.0 ± 0.0
3.401LysTyr: 3.401 ± 3.17
0.0LysXaa: 0.0 ± 0.0
Leu
3.401LeuAla: 3.401 ± 1.573
3.401LeuCys: 3.401 ± 3.17
3.401LeuAsp: 3.401 ± 1.573
1.701LeuGlu: 1.701 ± 0.787
5.102LeuPhe: 5.102 ± 2.36
3.401LeuGly: 3.401 ± 1.573
1.701LeuHis: 1.701 ± 0.787
17.007LeuIle: 17.007 ± 7.865
1.701LeuLys: 1.701 ± 0.787
8.503LeuLeu: 8.503 ± 5.554
5.102LeuMet: 5.102 ± 2.36
8.503LeuAsn: 8.503 ± 3.933
8.503LeuPro: 8.503 ± 5.554
3.401LeuGln: 3.401 ± 3.17
8.503LeuArg: 8.503 ± 3.933
11.905LeuSer: 11.905 ± 5.506
6.803LeuThr: 6.803 ± 6.341
5.102LeuVal: 5.102 ± 7.127
0.0LeuTrp: 0.0 ± 0.0
5.102LeuTyr: 5.102 ± 2.36
0.0LeuXaa: 0.0 ± 0.0
Met
3.401MetAla: 3.401 ± 1.573
0.0MetCys: 0.0 ± 0.0
0.0MetAsp: 0.0 ± 0.0
0.0MetGlu: 0.0 ± 0.0
0.0MetPhe: 0.0 ± 0.0
8.503MetGly: 8.503 ± 0.811
1.701MetHis: 1.701 ± 0.787
1.701MetIle: 1.701 ± 0.787
1.701MetLys: 1.701 ± 0.787
5.102MetLeu: 5.102 ± 2.36
0.0MetMet: 0.0 ± 0.0
3.401MetAsn: 3.401 ± 3.17
1.701MetPro: 1.701 ± 0.787
0.0MetGln: 0.0 ± 0.0
0.0MetArg: 0.0 ± 0.0
5.102MetSer: 5.102 ± 2.36
0.0MetThr: 0.0 ± 0.0
0.0MetVal: 0.0 ± 0.0
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
0.0AsnAla: 0.0 ± 0.0
3.401AsnCys: 3.401 ± 3.17
6.803AsnAsp: 6.803 ± 3.146
1.701AsnGlu: 1.701 ± 0.787
1.701AsnPhe: 1.701 ± 0.787
3.401AsnGly: 3.401 ± 1.573
6.803AsnHis: 6.803 ± 3.146
3.401AsnIle: 3.401 ± 3.17
3.401AsnLys: 3.401 ± 1.573
10.204AsnLeu: 10.204 ± 4.719
1.701AsnMet: 1.701 ± 0.787
6.803AsnAsn: 6.803 ± 3.146
0.0AsnPro: 0.0 ± 0.0
5.102AsnGln: 5.102 ± 2.384
3.401AsnArg: 3.401 ± 3.17
5.102AsnSer: 5.102 ± 2.36
3.401AsnThr: 3.401 ± 1.573
0.0AsnVal: 0.0 ± 0.0
0.0AsnTrp: 0.0 ± 0.0
3.401AsnTyr: 3.401 ± 1.573
0.0AsnXaa: 0.0 ± 0.0
Pro
1.701ProAla: 1.701 ± 0.787
0.0ProCys: 0.0 ± 0.0
5.102ProAsp: 5.102 ± 7.127
1.701ProGlu: 1.701 ± 3.957
1.701ProPhe: 1.701 ± 0.787
3.401ProGly: 3.401 ± 1.573
5.102ProHis: 5.102 ± 2.384
1.701ProIle: 1.701 ± 3.957
5.102ProLys: 5.102 ± 2.384
5.102ProLeu: 5.102 ± 2.384
3.401ProMet: 3.401 ± 1.324
1.701ProAsn: 1.701 ± 0.787
6.803ProPro: 6.803 ± 11.084
0.0ProGln: 0.0 ± 0.0
1.701ProArg: 1.701 ± 3.957
0.0ProSer: 0.0 ± 0.0
6.803ProThr: 6.803 ± 6.341
3.401ProVal: 3.401 ± 1.573
0.0ProTrp: 0.0 ± 0.0
3.401ProTyr: 3.401 ± 3.17
0.0ProXaa: 0.0 ± 0.0
Gln
0.0GlnAla: 0.0 ± 0.0
0.0GlnCys: 0.0 ± 0.0
0.0GlnAsp: 0.0 ± 0.0
1.701GlnGlu: 1.701 ± 0.787
0.0GlnPhe: 0.0 ± 0.0
0.0GlnGly: 0.0 ± 0.0
1.701GlnHis: 1.701 ± 0.787
3.401GlnIle: 3.401 ± 1.573
0.0GlnLys: 0.0 ± 0.0
5.102GlnLeu: 5.102 ± 2.384
1.701GlnMet: 1.701 ± 0.787
1.701GlnAsn: 1.701 ± 0.787
1.701GlnPro: 1.701 ± 0.787
1.701GlnGln: 1.701 ± 0.787
3.401GlnArg: 3.401 ± 1.573
3.401GlnSer: 3.401 ± 3.17
3.401GlnThr: 3.401 ± 1.573
0.0GlnVal: 0.0 ± 0.0
0.0GlnTrp: 0.0 ± 0.0
3.401GlnTyr: 3.401 ± 1.573
0.0GlnXaa: 0.0 ± 0.0
Arg
0.0ArgAla: 0.0 ± 0.0
1.701ArgCys: 1.701 ± 3.957
1.701ArgAsp: 1.701 ± 0.787
0.0ArgGlu: 0.0 ± 0.0
0.0ArgPhe: 0.0 ± 0.0
1.701ArgGly: 1.701 ± 3.957
1.701ArgHis: 1.701 ± 0.787
0.0ArgIle: 0.0 ± 0.0
1.701ArgLys: 1.701 ± 0.787
6.803ArgLeu: 6.803 ± 3.146
1.701ArgMet: 1.701 ± 1.313
3.401ArgAsn: 3.401 ± 1.573
1.701ArgPro: 1.701 ± 0.787
3.401ArgGln: 3.401 ± 1.573
5.102ArgArg: 5.102 ± 2.384
6.803ArgSer: 6.803 ± 1.597
5.102ArgThr: 5.102 ± 2.384
1.701ArgVal: 1.701 ± 0.787
3.401ArgTrp: 3.401 ± 1.573
0.0ArgTyr: 0.0 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
1.701SerAla: 1.701 ± 0.787
6.803SerCys: 6.803 ± 1.597
6.803SerAsp: 6.803 ± 1.597
0.0SerGlu: 0.0 ± 0.0
3.401SerPhe: 3.401 ± 1.573
3.401SerGly: 3.401 ± 3.17
3.401SerHis: 3.401 ± 1.573
6.803SerIle: 6.803 ± 3.146
5.102SerLys: 5.102 ± 2.384
8.503SerLeu: 8.503 ± 3.933
0.0SerMet: 0.0 ± 0.0
3.401SerAsn: 3.401 ± 3.17
3.401SerPro: 3.401 ± 3.17
0.0SerGln: 0.0 ± 0.0
3.401SerArg: 3.401 ± 1.573
1.701SerSer: 1.701 ± 0.787
6.803SerThr: 6.803 ± 1.597
5.102SerVal: 5.102 ± 2.36
0.0SerTrp: 0.0 ± 0.0
3.401SerTyr: 3.401 ± 1.573
0.0SerXaa: 0.0 ± 0.0
Thr
5.102ThrAla: 5.102 ± 7.127
1.701ThrCys: 1.701 ± 0.787
0.0ThrAsp: 0.0 ± 0.0
1.701ThrGlu: 1.701 ± 0.787
8.503ThrPhe: 8.503 ± 3.933
1.701ThrGly: 1.701 ± 0.787
3.401ThrHis: 3.401 ± 1.573
1.701ThrIle: 1.701 ± 3.957
1.701ThrLys: 1.701 ± 3.957
11.905ThrLeu: 11.905 ± 3.981
1.701ThrMet: 1.701 ± 0.787
1.701ThrAsn: 1.701 ± 0.787
6.803ThrPro: 6.803 ± 6.341
0.0ThrGln: 0.0 ± 0.0
3.401ThrArg: 3.401 ± 1.573
5.102ThrSer: 5.102 ± 2.36
5.102ThrThr: 5.102 ± 2.36
5.102ThrVal: 5.102 ± 2.36
3.401ThrTrp: 3.401 ± 1.573
1.701ThrTyr: 1.701 ± 0.787
0.0ThrXaa: 0.0 ± 0.0
Val
3.401ValAla: 3.401 ± 1.573
0.0ValCys: 0.0 ± 0.0
3.401ValAsp: 3.401 ± 1.573
3.401ValGlu: 3.401 ± 1.573
1.701ValPhe: 1.701 ± 0.787
1.701ValGly: 1.701 ± 0.787
0.0ValHis: 0.0 ± 0.0
1.701ValIle: 1.701 ± 0.787
3.401ValLys: 3.401 ± 3.17
3.401ValLeu: 3.401 ± 1.573
1.701ValMet: 1.701 ± 0.787
3.401ValAsn: 3.401 ± 1.573
3.401ValPro: 3.401 ± 3.17
1.701ValGln: 1.701 ± 0.787
1.701ValArg: 1.701 ± 0.787
1.701ValSer: 1.701 ± 0.787
1.701ValThr: 1.701 ± 0.787
0.0ValVal: 0.0 ± 0.0
0.0ValTrp: 0.0 ± 0.0
1.701ValTyr: 1.701 ± 0.787
0.0ValXaa: 0.0 ± 0.0
Trp
0.0TrpAla: 0.0 ± 0.0
0.0TrpCys: 0.0 ± 0.0
0.0TrpAsp: 0.0 ± 0.0
1.701TrpGlu: 1.701 ± 0.787
1.701TrpPhe: 1.701 ± 3.957
1.701TrpGly: 1.701 ± 0.787
0.0TrpHis: 0.0 ± 0.0
0.0TrpIle: 0.0 ± 0.0
3.401TrpLys: 3.401 ± 1.573
0.0TrpLeu: 0.0 ± 0.0
1.701TrpMet: 1.701 ± 0.787
0.0TrpAsn: 0.0 ± 0.0
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
0.0TrpArg: 0.0 ± 0.0
0.0TrpSer: 0.0 ± 0.0
1.701TrpThr: 1.701 ± 0.787
0.0TrpVal: 0.0 ± 0.0
0.0TrpTrp: 0.0 ± 0.0
1.701TrpTyr: 1.701 ± 0.787
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.0TyrAla: 0.0 ± 0.0
3.401TyrCys: 3.401 ± 1.573
1.701TyrAsp: 1.701 ± 0.787
5.102TyrGlu: 5.102 ± 2.36
0.0TyrPhe: 0.0 ± 0.0
0.0TyrGly: 0.0 ± 0.0
0.0TyrHis: 0.0 ± 0.0
3.401TyrIle: 3.401 ± 1.573
3.401TyrLys: 3.401 ± 1.573
10.204TyrLeu: 10.204 ± 0.024
0.0TyrMet: 0.0 ± 0.0
3.401TyrAsn: 3.401 ± 1.573
1.701TyrPro: 1.701 ± 3.957
0.0TyrGln: 0.0 ± 0.0
0.0TyrArg: 0.0 ± 0.0
3.401TyrSer: 3.401 ± 3.17
1.701TyrThr: 1.701 ± 0.787
0.0TyrVal: 0.0 ± 0.0
0.0TyrTrp: 0.0 ± 0.0
0.0TyrTyr: 0.0 ± 0.0
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (589 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski