Torque teno virus (isolate Human/Germany/KAV/2001) (TTV)

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 9.16

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 3 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>sp|Q914N3|ORF24_TTVV4 Uncharacterized ORF2/4 protein OS=Torque teno virus (isolate Human/Germany/KAV/2001) OX=687345 GN=ORF2/4 PE=4 SV=2
MM1 pKa = 7.29SWRR4 pKa = 11.84PPAHH8 pKa = 5.89NAEE11 pKa = 4.26GQEE14 pKa = 4.2GLWYY18 pKa = 10.43RR19 pKa = 11.84SVCQSHH25 pKa = 6.52GAFCGCGDD33 pKa = 4.29FVGHH37 pKa = 6.84LNRR40 pKa = 11.84LAEE43 pKa = 4.16RR44 pKa = 11.84LGRR47 pKa = 11.84PQPPRR52 pKa = 11.84PPGGPPGPAIRR63 pKa = 11.84VLPALPPAEE72 pKa = 4.22GSPRR76 pKa = 11.84RR77 pKa = 11.84HH78 pKa = 5.71NRR80 pKa = 11.84TEE82 pKa = 3.76NQPCGGGDD90 pKa = 3.75ADD92 pKa = 6.18FGDD95 pKa = 4.06QRR97 pKa = 11.84DD98 pKa = 3.95AGDD101 pKa = 3.84GGAAADD107 pKa = 4.57DD108 pKa = 4.56LSPADD113 pKa = 5.19VEE115 pKa = 6.18DD116 pKa = 4.4LLDD119 pKa = 3.83WLDD122 pKa = 3.89APDD125 pKa = 4.66RR126 pKa = 11.84LSKK129 pKa = 10.08TPVNNPPLTSPVPVEE144 pKa = 4.35SLVQYY149 pKa = 10.73KK150 pKa = 10.69LSTRR154 pKa = 11.84STSTRR159 pKa = 11.84ASRR162 pKa = 11.84STDD165 pKa = 2.79GTSDD169 pKa = 3.4VASLGRR175 pKa = 11.84QLLKK179 pKa = 10.45EE180 pKa = 4.35CKK182 pKa = 9.66QNQQMLSFLQQVQNAQEE199 pKa = 4.14QRR201 pKa = 11.84SPWPLQEE208 pKa = 3.98TPYY211 pKa = 11.19LPGRR215 pKa = 11.84EE216 pKa = 3.84NAKK219 pKa = 10.02PGKK222 pKa = 8.17TRR224 pKa = 11.84PRR226 pKa = 11.84KK227 pKa = 9.73KK228 pKa = 9.9PRR230 pKa = 11.84AKK232 pKa = 10.02QKK234 pKa = 7.95PKK236 pKa = 9.71KK237 pKa = 8.65RR238 pKa = 11.84RR239 pKa = 11.84RR240 pKa = 11.84YY241 pKa = 8.69RR242 pKa = 11.84SSSNSSSKK250 pKa = 11.45SNDD253 pKa = 2.98SSDD256 pKa = 4.32AEE258 pKa = 4.37SSTCSSNN265 pKa = 3.15

Molecular weight: 28.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>sp|Q914N2|ORF23_TTVV4 Probable protein VP2 OS=Torque teno virus (isolate Human/Germany/KAV/2001) OX=687345 GN=ORF2/3 PE=3 SV=2
MM1 pKa = 6.56WWWRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84FWRR10 pKa = 11.84PKK12 pKa = 10.04RR13 pKa = 11.84RR14 pKa = 11.84WRR16 pKa = 11.84WRR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84RR21 pKa = 11.84RR22 pKa = 11.84RR23 pKa = 11.84PLARR27 pKa = 11.84RR28 pKa = 11.84RR29 pKa = 11.84RR30 pKa = 11.84RR31 pKa = 11.84PARR34 pKa = 11.84LARR37 pKa = 11.84RR38 pKa = 11.84PRR40 pKa = 11.84VRR42 pKa = 11.84RR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84FQWGRR50 pKa = 11.84PRR52 pKa = 11.84RR53 pKa = 11.84YY54 pKa = 8.45RR55 pKa = 11.84PRR57 pKa = 11.84RR58 pKa = 11.84RR59 pKa = 11.84RR60 pKa = 11.84RR61 pKa = 11.84RR62 pKa = 11.84RR63 pKa = 11.84KK64 pKa = 8.28RR65 pKa = 11.84QKK67 pKa = 10.29IKK69 pKa = 10.68LKK71 pKa = 9.32QWNPAVTKK79 pKa = 8.01FCRR82 pKa = 11.84IIGYY86 pKa = 9.41YY87 pKa = 9.57PLIICGEE94 pKa = 4.23GTTVRR99 pKa = 11.84NYY101 pKa = 10.24NVHH104 pKa = 5.41SQDD107 pKa = 3.31YY108 pKa = 8.83VQYY111 pKa = 8.72EE112 pKa = 4.59SYY114 pKa = 10.78GGGMTTTMFNLKK126 pKa = 9.81VPYY129 pKa = 9.89EE130 pKa = 3.94QFQLHH135 pKa = 4.96QNFWTRR141 pKa = 11.84SNIDD145 pKa = 3.46LDD147 pKa = 3.7LVRR150 pKa = 11.84YY151 pKa = 9.61HH152 pKa = 6.22SVKK155 pKa = 9.47FTFFRR160 pKa = 11.84HH161 pKa = 5.67PKK163 pKa = 9.26VDD165 pKa = 5.0FIVKK169 pKa = 9.51FNRR172 pKa = 11.84NPPFTDD178 pKa = 3.3SVLTGPMLHH187 pKa = 7.03PGVLMNSKK195 pKa = 10.28RR196 pKa = 11.84KK197 pKa = 9.61ILIPSWEE204 pKa = 3.93TRR206 pKa = 11.84PRR208 pKa = 11.84GKK210 pKa = 10.24KK211 pKa = 9.69RR212 pKa = 11.84IPVRR216 pKa = 11.84IGPPRR221 pKa = 11.84LFTDD225 pKa = 3.16HH226 pKa = 7.43WYY228 pKa = 9.49FQRR231 pKa = 11.84DD232 pKa = 3.74FCGVPLLTVNATACNLRR249 pKa = 11.84YY250 pKa = 9.55PFGSPQTKK258 pKa = 10.13NICIYY263 pKa = 10.38FLVLASIYY271 pKa = 10.01NDD273 pKa = 3.11KK274 pKa = 11.14VSIAKK279 pKa = 10.52DD280 pKa = 3.64EE281 pKa = 4.18VTKK284 pKa = 11.05NYY286 pKa = 7.73DD287 pKa = 3.64TLVDD291 pKa = 5.16AIKK294 pKa = 10.5KK295 pKa = 9.48SPQGLTVFNTFKK307 pKa = 10.01TQEE310 pKa = 4.01HH311 pKa = 4.86MQEE314 pKa = 4.36PSSEE318 pKa = 4.39TCKK321 pKa = 9.6EE322 pKa = 4.38TQKK325 pKa = 9.91TNPPFKK331 pKa = 10.88YY332 pKa = 10.25EE333 pKa = 4.09NLSSLWGDD341 pKa = 4.04KK342 pKa = 10.04IYY344 pKa = 11.03KK345 pKa = 10.08EE346 pKa = 4.14STFNSFKK353 pKa = 10.92TNAEE357 pKa = 4.22NLWKK361 pKa = 10.51ARR363 pKa = 11.84SKK365 pKa = 9.77HH366 pKa = 4.97TLLGSKK372 pKa = 9.21EE373 pKa = 4.47LNFKK377 pKa = 9.69TGMYY381 pKa = 10.13SAIFLTNGRR390 pKa = 11.84LSPDD394 pKa = 3.12YY395 pKa = 9.85PGIYY399 pKa = 9.23IEE401 pKa = 4.74VVYY404 pKa = 11.01NPLLGQGEE412 pKa = 4.99GNMIWLEE419 pKa = 3.98WCPKK423 pKa = 8.68KK424 pKa = 9.34TKK426 pKa = 10.13QYY428 pKa = 11.25NEE430 pKa = 3.97RR431 pKa = 11.84QCYY434 pKa = 10.17NLIQHH439 pKa = 5.7VPLWAAIHH447 pKa = 6.72GYY449 pKa = 9.27MDD451 pKa = 3.98FCKK454 pKa = 10.01KK455 pKa = 8.21TFKK458 pKa = 11.05DD459 pKa = 3.46NNLDD463 pKa = 3.38KK464 pKa = 10.24NTRR467 pKa = 11.84VVLICPYY474 pKa = 9.74TRR476 pKa = 11.84PQLYY480 pKa = 10.16NPQKK484 pKa = 9.84PDD486 pKa = 2.84WGYY489 pKa = 11.21VPYY492 pKa = 10.18DD493 pKa = 3.51YY494 pKa = 11.69NFAQTKK500 pKa = 8.88MPDD503 pKa = 3.2GNGYY507 pKa = 9.44IPEE510 pKa = 4.7FYY512 pKa = 10.42RR513 pKa = 11.84FRR515 pKa = 11.84WYY517 pKa = 10.0PSGFHH522 pKa = 5.19QQNWMNDD529 pKa = 3.26LDD531 pKa = 3.84QCGPFSHH538 pKa = 7.11RR539 pKa = 11.84GEE541 pKa = 4.17EE542 pKa = 4.19KK543 pKa = 10.18MATLTSKK550 pKa = 11.37YY551 pKa = 10.07NFKK554 pKa = 9.65FTWGGNPIFQQTVKK568 pKa = 10.66DD569 pKa = 3.69PCKK572 pKa = 10.37QSTFDD577 pKa = 3.35IPGAGGIPRR586 pKa = 11.84PIQIVNPKK594 pKa = 9.72YY595 pKa = 10.3LDD597 pKa = 3.72PGITFHH603 pKa = 7.39RR604 pKa = 11.84WDD606 pKa = 3.5LRR608 pKa = 11.84RR609 pKa = 11.84GFFGPAAVKK618 pKa = 10.38RR619 pKa = 11.84MQAEE623 pKa = 4.19STDD626 pKa = 3.57ALFPTTGPKK635 pKa = 9.84RR636 pKa = 11.84PRR638 pKa = 11.84TEE640 pKa = 3.62VPVAVAGDD648 pKa = 3.89ALPSRR653 pKa = 11.84EE654 pKa = 4.25RR655 pKa = 11.84KK656 pKa = 8.46RR657 pKa = 11.84QAWQDD662 pKa = 3.4STSEE666 pKa = 4.14EE667 pKa = 4.42TEE669 pKa = 4.25SEE671 pKa = 4.3AEE673 pKa = 3.99AQEE676 pKa = 4.25EE677 pKa = 4.36KK678 pKa = 10.28TLQEE682 pKa = 4.12QLQQQLKK689 pKa = 7.19EE690 pKa = 4.08QRR692 pKa = 11.84QLRR695 pKa = 11.84CGIQYY700 pKa = 7.87MFQQLTKK707 pKa = 8.95TQLHH711 pKa = 5.87LHH713 pKa = 6.14VPPIPQQ719 pKa = 3.2

Molecular weight: 85.56 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

3

0

3

1258

265

719

419.3

48.26

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.041 ± 1.842

1.908 ± 0.118

5.008 ± 0.856

4.452 ± 0.03

4.054 ± 1.186

6.836 ± 0.98

1.908 ± 0.153

2.941 ± 1.281

5.644 ± 1.321

7.154 ± 0.293

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.669 ± 0.307

4.849 ± 0.229

9.777 ± 1.577

5.882 ± 0.375

10.413 ± 0.661

5.882 ± 1.838

5.564 ± 0.855

4.054 ± 0.441

2.623 ± 0.401

3.339 ± 1.069
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski