Tenacibaculum phage JQ

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; unclassified Siphoviridae

Average proteome isoelectric point is 7.0

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 72 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6G6XUV2|A0A6G6XUV2_9CAUD Uncharacterized protein OS=Tenacibaculum phage JQ OX=2712935 PE=4 SV=1
MM1 pKa = 7.79ASNIIIQFNSALQSGDD17 pKa = 3.47FLRR20 pKa = 11.84LQDD23 pKa = 3.74SYY25 pKa = 11.37TPNVEE30 pKa = 3.83MGFYY34 pKa = 9.29WGSASGFLPVTGNISSDD51 pKa = 2.83INNLKK56 pKa = 10.31NRR58 pKa = 11.84INTAYY63 pKa = 10.65NSTNRR68 pKa = 11.84YY69 pKa = 6.18TVTSDD74 pKa = 2.79ATSITITDD82 pKa = 3.74NIGFSEE88 pKa = 4.51FSEE91 pKa = 4.66VNNSTGARR99 pKa = 11.84LDD101 pKa = 3.27ITIVNDD107 pKa = 3.44SQQIGVNIDD116 pKa = 3.55NIEE119 pKa = 4.43LIEE122 pKa = 4.34NATNPCDD129 pKa = 3.68LVDD132 pKa = 4.51VRR134 pKa = 11.84ITTNEE139 pKa = 3.68APFDD143 pKa = 3.94LLQPVSVTDD152 pKa = 3.59IQTTTYY158 pKa = 9.81TISDD162 pKa = 3.77VQRR165 pKa = 11.84SINFINVEE173 pKa = 4.18VKK175 pKa = 10.4KK176 pKa = 11.29GNITDD181 pKa = 3.97LEE183 pKa = 4.46EE184 pKa = 4.39IFAPVINSEE193 pKa = 4.17LFKK196 pKa = 10.92LDD198 pKa = 3.41VVNTPSGATLSIRR211 pKa = 11.84WKK213 pKa = 10.19GVRR216 pKa = 11.84NPFFDD221 pKa = 4.63LEE223 pKa = 4.1YY224 pKa = 10.51SINGVDD230 pKa = 4.16YY231 pKa = 11.03YY232 pKa = 11.51SSTSFSGLEE241 pKa = 3.95DD242 pKa = 3.45GNYY245 pKa = 9.02TLYY248 pKa = 10.4IRR250 pKa = 11.84DD251 pKa = 4.27SIGCSITIPFEE262 pKa = 4.0VTEE265 pKa = 4.39FEE267 pKa = 4.67PNVYY271 pKa = 10.11EE272 pKa = 3.77RR273 pKa = 11.84TSFFEE278 pKa = 4.04ISEE281 pKa = 4.2QNSNIWIKK289 pKa = 10.15QEE291 pKa = 4.05YY292 pKa = 9.71KK293 pKa = 10.67DD294 pKa = 3.66SCNVYY299 pKa = 10.9SNLTNTLSYY308 pKa = 11.58EE309 pKa = 3.89EE310 pKa = 4.2TTQVNNQSFKK320 pKa = 11.19QLFQKK325 pKa = 10.77CDD327 pKa = 3.91GIVTNQYY334 pKa = 7.53KK335 pKa = 9.73TNYY338 pKa = 8.73EE339 pKa = 3.87NVEE342 pKa = 4.08IKK344 pKa = 10.89LIDD347 pKa = 3.81CDD349 pKa = 4.21GNEE352 pKa = 4.22SLLVSNQISQNINITDD368 pKa = 3.47VRR370 pKa = 11.84DD371 pKa = 3.78VTIEE375 pKa = 3.78AYY377 pKa = 9.64EE378 pKa = 4.01YY379 pKa = 10.94NEE381 pKa = 4.1SSFVGVTYY389 pKa = 10.93VSGNTYY395 pKa = 11.03DD396 pKa = 4.72SNTLTANGSYY406 pKa = 10.57YY407 pKa = 10.53LASSVPSFMNIDD419 pKa = 3.71DD420 pKa = 5.53FIQIEE425 pKa = 4.29GAGWYY430 pKa = 9.21RR431 pKa = 11.84VRR433 pKa = 11.84DD434 pKa = 3.5IIFYY438 pKa = 11.28NNIQTLILDD447 pKa = 3.82VLEE450 pKa = 4.56SDD452 pKa = 5.25FPISLNQTVKK462 pKa = 9.73GTSIYY467 pKa = 10.45NQLDD471 pKa = 3.66YY472 pKa = 11.28EE473 pKa = 4.51LYY475 pKa = 9.39EE476 pKa = 4.06ASYY479 pKa = 11.39DD480 pKa = 3.94LSTLNGDD487 pKa = 3.75YY488 pKa = 11.0YY489 pKa = 10.92LTLDD493 pKa = 3.74ATDD496 pKa = 4.2SEE498 pKa = 5.07FDD500 pKa = 3.61TVSYY504 pKa = 10.19RR505 pKa = 11.84SEE507 pKa = 3.94WFNVASMQYY516 pKa = 8.5NTYY519 pKa = 10.72LLQYY523 pKa = 9.93YY524 pKa = 10.19NSEE527 pKa = 4.25NNEE530 pKa = 4.01TNYY533 pKa = 11.03SNGIRR538 pKa = 11.84NKK540 pKa = 10.1FRR542 pKa = 11.84IRR544 pKa = 11.84YY545 pKa = 7.38QKK547 pKa = 10.33QFTYY551 pKa = 10.4IPNDD555 pKa = 3.47TNEE558 pKa = 4.12VYY560 pKa = 9.5LTDD563 pKa = 3.75TNAVQTDD570 pKa = 3.55SQYY573 pKa = 11.38RR574 pKa = 11.84DD575 pKa = 3.69YY576 pKa = 11.66LKK578 pKa = 10.74LDD580 pKa = 4.15LMPMPVNMVRR590 pKa = 11.84KK591 pKa = 10.15LGLAFSNDD599 pKa = 2.74RR600 pKa = 11.84VFINGLSLIKK610 pKa = 10.82NNEE613 pKa = 4.05LEE615 pKa = 4.06VEE617 pKa = 4.53RR618 pKa = 11.84IGEE621 pKa = 4.16SNEE624 pKa = 3.66YY625 pKa = 10.03RR626 pKa = 11.84FSAQFVRR633 pKa = 11.84SDD635 pKa = 3.31YY636 pKa = 11.53AFDD639 pKa = 3.54VTISDD644 pKa = 3.7NSIVLPQGQPLQINDD659 pKa = 3.52NAEE662 pKa = 3.74GLLFINN668 pKa = 5.04

Molecular weight: 76.04 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6G6XUY7|A0A6G6XUY7_9CAUD Uncharacterized protein OS=Tenacibaculum phage JQ OX=2712935 PE=4 SV=1
MM1 pKa = 7.6RR2 pKa = 11.84LIVVNRR8 pKa = 11.84RR9 pKa = 11.84YY10 pKa = 10.46LLRR13 pKa = 11.84GKK15 pKa = 9.5FFRR18 pKa = 11.84YY19 pKa = 9.96NRR21 pKa = 11.84MKK23 pKa = 10.58GVKK26 pKa = 9.97DD27 pKa = 3.67LGFKK31 pKa = 10.11FAIGIYY37 pKa = 7.61EE38 pKa = 3.77FRR40 pKa = 11.84FYY42 pKa = 11.21RR43 pKa = 4.1

Molecular weight: 5.44 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

72

0

72

11129

42

755

154.6

17.91

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.502 ± 0.334

1.339 ± 0.201

6.092 ± 0.208

7.674 ± 0.33

4.421 ± 0.292

4.996 ± 0.315

1.465 ± 0.199

7.898 ± 0.275

10.154 ± 0.871

8.536 ± 0.318

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.13 ± 0.161

7.79 ± 0.356

2.309 ± 0.151

3.271 ± 0.195

4.035 ± 0.272

5.895 ± 0.387

5.661 ± 0.314

5.571 ± 0.269

1.195 ± 0.12

5.068 ± 0.256
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski