Rhizoctonia solani virus 717

Taxonomy: Viruses; Riboviria; Orthornavirae; Pisuviricota; Duplopiviricetes; Durnavirales; Partitiviridae; Betapartitivirus

Average proteome isoelectric point is 6.03

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q9Q9X2|Q9Q9X2_9VIRU Putative RNA-dependent RNA polymerase OS=Rhizoctonia solani virus 717 OX=46618 PE=4 SV=1
MM1 pKa = 7.85LYY3 pKa = 10.41NFKK6 pKa = 11.1AFISKK11 pKa = 9.74VSHH14 pKa = 6.96SIRR17 pKa = 11.84DD18 pKa = 3.98YY19 pKa = 10.39LTEE22 pKa = 4.18AYY24 pKa = 9.2IRR26 pKa = 11.84RR27 pKa = 11.84NFEE30 pKa = 3.34WSNFNKK36 pKa = 10.28LHH38 pKa = 6.65TDD40 pKa = 3.53PSTAYY45 pKa = 10.7YY46 pKa = 10.29DD47 pKa = 3.27IRR49 pKa = 11.84DD50 pKa = 3.82PSNVRR55 pKa = 11.84AYY57 pKa = 10.19HH58 pKa = 6.18ALFGTRR64 pKa = 11.84RR65 pKa = 11.84QPPPKK70 pKa = 9.94QIEE73 pKa = 4.35LEE75 pKa = 4.2SYY77 pKa = 9.18MLNLIHH83 pKa = 7.49RR84 pKa = 11.84NAIKK88 pKa = 10.32NRR90 pKa = 11.84PFQFYY95 pKa = 10.26TDD97 pKa = 4.54LFTDD101 pKa = 3.51TDD103 pKa = 4.42LPTDD107 pKa = 5.33RR108 pKa = 11.84IPKK111 pKa = 9.72PGIEE115 pKa = 4.04LVNAYY120 pKa = 7.22FHH122 pKa = 7.26PGNVIRR128 pKa = 11.84PNPEE132 pKa = 3.13FSKK135 pKa = 10.91QLTPDD140 pKa = 3.26MEE142 pKa = 6.07LDD144 pKa = 3.38QFEE147 pKa = 4.95SYY149 pKa = 10.73IPGDD153 pKa = 3.32IDD155 pKa = 3.73YY156 pKa = 10.79GPPIDD161 pKa = 5.58NEE163 pKa = 4.41LLTLIYY169 pKa = 10.1RR170 pKa = 11.84KK171 pKa = 9.85YY172 pKa = 9.83PQYY175 pKa = 10.98LDD177 pKa = 5.46PITKK181 pKa = 8.61YY182 pKa = 10.31CRR184 pKa = 11.84PAGTTDD190 pKa = 2.59ATFRR194 pKa = 11.84DD195 pKa = 4.49FNKK198 pKa = 10.35EE199 pKa = 3.84QIKK202 pKa = 9.31TEE204 pKa = 4.22DD205 pKa = 3.25SDD207 pKa = 4.58ALRR210 pKa = 11.84LSNIMDD216 pKa = 5.9LIHH219 pKa = 6.88EE220 pKa = 4.76FMNITPYY227 pKa = 10.2MPLHH231 pKa = 6.02FVDD234 pKa = 4.25TFYY237 pKa = 11.5CKK239 pKa = 10.63LPLVTGTGYY248 pKa = 10.78HH249 pKa = 5.8NRR251 pKa = 11.84HH252 pKa = 5.7SYY254 pKa = 9.57FRR256 pKa = 11.84RR257 pKa = 11.84SFAHH261 pKa = 6.2FCHH264 pKa = 6.84PEE266 pKa = 4.07LYY268 pKa = 10.47AEE270 pKa = 4.65KK271 pKa = 8.44PTSKK275 pKa = 10.74GYY277 pKa = 10.29FFNATKK283 pKa = 10.48HH284 pKa = 4.88EE285 pKa = 3.95NRR287 pKa = 11.84FLVHH291 pKa = 6.88KK292 pKa = 9.18IKK294 pKa = 10.8HH295 pKa = 5.41SGYY298 pKa = 9.39PFDD301 pKa = 4.22FTSDD305 pKa = 3.1SDD307 pKa = 4.3RR308 pKa = 11.84NSKK311 pKa = 9.03MADD314 pKa = 3.43FLKK317 pKa = 10.75SFPTMMFTRR326 pKa = 11.84NHH328 pKa = 5.28ISKK331 pKa = 10.37RR332 pKa = 11.84DD333 pKa = 3.44GTLKK337 pKa = 10.16VRR339 pKa = 11.84PVYY342 pKa = 10.59AVDD345 pKa = 4.16EE346 pKa = 4.51LFLDD350 pKa = 4.56LEE352 pKa = 4.57CMLAFPATVQARR364 pKa = 11.84KK365 pKa = 9.47PEE367 pKa = 4.1CCIMYY372 pKa = 10.3GLEE375 pKa = 4.27TIRR378 pKa = 11.84GSNIKK383 pKa = 10.13LDD385 pKa = 3.71SLAQGFISFATIDD398 pKa = 3.19WSGYY402 pKa = 6.98DD403 pKa = 3.9QRR405 pKa = 11.84LPWFIVRR412 pKa = 11.84AFFFIYY418 pKa = 10.26LPSLLIISHH427 pKa = 6.6GYY429 pKa = 8.34MPTSEE434 pKa = 4.69YY435 pKa = 10.64EE436 pKa = 4.06DD437 pKa = 3.28TSMNISDD444 pKa = 3.51MFTRR448 pKa = 11.84FFNLINFTATWYY460 pKa = 10.72FNMVFLSADD469 pKa = 3.08GFAFRR474 pKa = 11.84RR475 pKa = 11.84QFAGVPSGMLLTQFLDD491 pKa = 3.73SFGNLYY497 pKa = 10.67LIIDD501 pKa = 3.87SLLEE505 pKa = 3.99FGCTYY510 pKa = 11.56DD511 pKa = 5.14DD512 pKa = 4.17IKK514 pKa = 11.59SLMLFIMGDD523 pKa = 3.62DD524 pKa = 3.55NSIFTNWTIDD534 pKa = 3.41KK535 pKa = 9.92LHH537 pKa = 6.93DD538 pKa = 4.49FISFMEE544 pKa = 4.63RR545 pKa = 11.84YY546 pKa = 9.0CLKK549 pKa = 9.56RR550 pKa = 11.84WNMHH554 pKa = 5.18LSKK557 pKa = 9.17TKK559 pKa = 10.71SVITTLRR566 pKa = 11.84SKK568 pKa = 10.66IEE570 pKa = 4.02TLSYY574 pKa = 10.17RR575 pKa = 11.84CNFGKK580 pKa = 9.73PRR582 pKa = 11.84RR583 pKa = 11.84DD584 pKa = 3.36VEE586 pKa = 4.11KK587 pKa = 10.91LIAQLVYY594 pKa = 10.03PEE596 pKa = 5.38HH597 pKa = 6.25GLKK600 pKa = 9.66PQFMSSRR607 pKa = 11.84AIGLAYY613 pKa = 10.1ASCAQDD619 pKa = 3.26STFHH623 pKa = 6.11EE624 pKa = 5.44FCHH627 pKa = 6.49DD628 pKa = 3.66VYY630 pKa = 11.2RR631 pKa = 11.84LYY633 pKa = 11.25LPVADD638 pKa = 5.5LSPAAIRR645 pKa = 11.84NTRR648 pKa = 11.84VWILKK653 pKa = 9.15LLEE656 pKa = 4.17MEE658 pKa = 4.2EE659 pKa = 4.36TEE661 pKa = 4.83ALIPLDD667 pKa = 4.11HH668 pKa = 7.15FPTMSEE674 pKa = 3.84IQHH677 pKa = 6.31LLSYY681 pKa = 9.88YY682 pKa = 10.19HH683 pKa = 6.91GPLRR687 pKa = 11.84PEE689 pKa = 4.17PKK691 pKa = 8.81WNYY694 pKa = 10.04AHH696 pKa = 7.2FPQDD700 pKa = 3.06PDD702 pKa = 3.88FRR704 pKa = 11.84PKK706 pKa = 10.84DD707 pKa = 3.77YY708 pKa = 10.59VTLLDD713 pKa = 3.52YY714 pKa = 10.49MEE716 pKa = 5.31RR717 pKa = 11.84NNISFPEE724 pKa = 4.7LINFTVV730 pKa = 3.1

Molecular weight: 85.78 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q9Q9X2|Q9Q9X2_9VIRU Putative RNA-dependent RNA polymerase OS=Rhizoctonia solani virus 717 OX=46618 PE=4 SV=1
MM1 pKa = 7.95PSPKK5 pKa = 9.44ISLQDD10 pKa = 3.4RR11 pKa = 11.84LSKK14 pKa = 9.4VTNLNPEE21 pKa = 4.12VKK23 pKa = 9.11FTQGDD28 pKa = 4.23KK29 pKa = 10.96IPDD32 pKa = 3.46RR33 pKa = 11.84AIDD36 pKa = 3.43FHH38 pKa = 7.0EE39 pKa = 4.58VYY41 pKa = 10.31KK42 pKa = 11.13ANSSSKK48 pKa = 9.83IDD50 pKa = 3.49SANVFTIDD58 pKa = 3.43VLPNFVPILCFVIYY72 pKa = 9.8HH73 pKa = 6.38ANVYY77 pKa = 8.89STDD80 pKa = 3.54INKK83 pKa = 9.89HH84 pKa = 4.21GHH86 pKa = 5.99SKK88 pKa = 9.68TSVPTFVSYY97 pKa = 10.97CMSIIYY103 pKa = 9.77GYY105 pKa = 10.83FLLSDD110 pKa = 3.85MYY112 pKa = 11.06VRR114 pKa = 11.84PSPSVFASSWKK125 pKa = 10.53NSTFRR130 pKa = 11.84DD131 pKa = 3.4NFATFLASLPVPEE144 pKa = 4.98FLLPILTSFHH154 pKa = 6.93PFADD158 pKa = 3.88DD159 pKa = 3.11TRR161 pKa = 11.84HH162 pKa = 5.18NVIFVASAAGYY173 pKa = 9.88RR174 pKa = 11.84YY175 pKa = 7.9EE176 pKa = 3.85QHH178 pKa = 6.47FGKK181 pKa = 10.37IIPTLAFYY189 pKa = 10.5NIHH192 pKa = 7.57DD193 pKa = 4.31IVCEE197 pKa = 4.06QPSNAQKK204 pKa = 10.77FDD206 pKa = 3.5ILNALYY212 pKa = 10.67SKK214 pKa = 10.73AIYY217 pKa = 9.97HH218 pKa = 5.7ITATNFNASLANYY231 pKa = 9.28IGYY234 pKa = 10.03GYY236 pKa = 10.63NNAAARR242 pKa = 11.84TNDD245 pKa = 3.64RR246 pKa = 11.84GHH248 pKa = 5.75STGKK252 pKa = 9.99LFQVFEE258 pKa = 4.68SLFSPVLFRR267 pKa = 11.84DD268 pKa = 3.26YY269 pKa = 11.04HH270 pKa = 6.18KK271 pKa = 10.53RR272 pKa = 11.84HH273 pKa = 5.83SLASISLEE281 pKa = 3.84PPTFATSAFNVYY293 pKa = 10.22DD294 pKa = 3.43WLFAATRR301 pKa = 11.84DD302 pKa = 3.6NLAEE306 pKa = 3.98QKK308 pKa = 10.26IVLSSVKK315 pKa = 10.59SFVLDD320 pKa = 3.59SVKK323 pKa = 10.62CSGTLADD330 pKa = 5.28AFTASTGAQITRR342 pKa = 11.84HH343 pKa = 5.93GYY345 pKa = 10.64SLMSLPTAHH354 pKa = 6.91GKK356 pKa = 9.22NLIDD360 pKa = 4.69ANGDD364 pKa = 4.01LISSAKK370 pKa = 10.42LSATDD375 pKa = 3.66RR376 pKa = 11.84QISRR380 pKa = 11.84SARR383 pKa = 11.84DD384 pKa = 3.16IAIEE388 pKa = 4.01IGFLPPIDD396 pKa = 3.91ATPSHH401 pKa = 6.57KK402 pKa = 10.3QPQPQALDD410 pKa = 3.98NKK412 pKa = 9.68DD413 pKa = 3.44QPIPDD418 pKa = 3.65SHH420 pKa = 8.22VSNASWPWNLLHH432 pKa = 6.52STLNPPTAPKK442 pKa = 10.42LSDD445 pKa = 3.74VIQVPSPEE453 pKa = 4.17TEE455 pKa = 3.9FEE457 pKa = 4.02IFDD460 pKa = 4.21SDD462 pKa = 3.31RR463 pKa = 11.84HH464 pKa = 5.95HH465 pKa = 6.45YY466 pKa = 10.18PPVRR470 pKa = 11.84VLNFPDD476 pKa = 4.85DD477 pKa = 4.11STVDD481 pKa = 3.21AHH483 pKa = 7.01LATLTGMVIEE493 pKa = 4.61SFEE496 pKa = 4.1IDD498 pKa = 3.7GSVVAHH504 pKa = 6.95PDD506 pKa = 2.93AHH508 pKa = 6.91LSNGVDD514 pKa = 3.48NTWFAVSAISLRR526 pKa = 11.84YY527 pKa = 8.35VYY529 pKa = 10.32QYY531 pKa = 9.42NTLQNGNASPIRR543 pKa = 11.84ARR545 pKa = 11.84SRR547 pKa = 11.84VFRR550 pKa = 11.84PTQGAHH556 pKa = 7.14PIATLFVDD564 pKa = 4.24RR565 pKa = 11.84TQINLPRR572 pKa = 11.84PAPYY576 pKa = 10.35LYY578 pKa = 10.62DD579 pKa = 3.3QLVNNTLPGLTIVQNATWIAKK600 pKa = 8.82VKK602 pKa = 10.66SFLGSNVSHH611 pKa = 7.28RR612 pKa = 11.84LRR614 pKa = 11.84RR615 pKa = 11.84TEE617 pKa = 3.49NTYY620 pKa = 10.73PGFDD624 pKa = 4.06DD625 pKa = 4.25RR626 pKa = 11.84DD627 pKa = 3.55IYY629 pKa = 10.95VWSPYY634 pKa = 10.46SYY636 pKa = 10.51TPVSPRR642 pKa = 11.84DD643 pKa = 3.68DD644 pKa = 4.38ADD646 pKa = 3.02IDD648 pKa = 3.74YY649 pKa = 10.62SEE651 pKa = 4.14QVTYY655 pKa = 10.82FLTNLRR661 pKa = 11.84TIFGTRR667 pKa = 11.84NRR669 pKa = 11.84MIEE672 pKa = 4.04VQNSLEE678 pKa = 4.04VMPVMM683 pKa = 5.69

Molecular weight: 76.42 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

1413

683

730

706.5

81.1

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.369 ± 1.205

1.062 ± 0.341

6.723 ± 0.096

3.751 ± 0.799

7.077 ± 0.874

3.539 ± 0.018

3.468 ± 0.033

6.653 ± 0.046

4.176 ± 0.474

8.846 ± 0.673

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.265 ± 0.783

5.449 ± 0.501

6.723 ± 0.218

2.76 ± 0.33

5.308 ± 0.446

8.209 ± 1.251

6.582 ± 0.11

4.883 ± 1.431

1.062 ± 0.026

5.096 ± 0.504
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski