Fowl aviadenovirus C

Taxonomy: Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Rowavirales; Adenoviridae; Aviadenovirus

Average proteome isoelectric point is 6.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F2VJF5|F2VJF5_9ADEN ORF0 OS=Fowl aviadenovirus C OX=190063 PE=4 SV=1
MM1 pKa = 7.7SLEE4 pKa = 4.52TEE6 pKa = 4.16CHH8 pKa = 6.44APLQYY13 pKa = 10.85ISMLSFDD20 pKa = 5.25DD21 pKa = 4.26LLAAAGPPDD30 pKa = 3.92YY31 pKa = 11.09SPEE34 pKa = 4.18EE35 pKa = 4.06NQEE38 pKa = 4.0TPPIEE43 pKa = 4.37TIEE46 pKa = 4.24VGDD49 pKa = 3.65IMAEE53 pKa = 3.72LGIPIEE59 pKa = 4.72GPPTSPSDD67 pKa = 3.52SSSSLDD73 pKa = 3.3SVLFSGVDD81 pKa = 3.83LYY83 pKa = 11.61DD84 pKa = 3.97LDD86 pKa = 3.96YY87 pKa = 10.96TIVFSRR93 pKa = 11.84LRR95 pKa = 11.84EE96 pKa = 3.9FWQSHH101 pKa = 4.12GAYY104 pKa = 9.28LKK106 pKa = 9.53TVASLEE112 pKa = 4.04CMQNDD117 pKa = 3.53RR118 pKa = 11.84KK119 pKa = 10.15FQEE122 pKa = 4.95AYY124 pKa = 9.4CSLVRR129 pKa = 11.84MHH131 pKa = 6.99AVSEE135 pKa = 4.2DD136 pKa = 3.47AKK138 pKa = 10.72EE139 pKa = 4.03HH140 pKa = 6.31LNEE143 pKa = 4.65LLLDD147 pKa = 3.62EE148 pKa = 5.09TNYY151 pKa = 8.96QHH153 pKa = 7.46CEE155 pKa = 3.96PLNDD159 pKa = 3.65MLDD162 pKa = 3.71LGFRR166 pKa = 11.84WLNDD170 pKa = 3.33LKK172 pKa = 11.03GGIMEE177 pKa = 4.55WCMDD181 pKa = 3.75TALDD185 pKa = 3.88RR186 pKa = 11.84ASKK189 pKa = 10.65VMPLTDD195 pKa = 3.67YY196 pKa = 11.04QPQQ199 pKa = 3.17

Molecular weight: 22.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F2VJH3|F2VJH3_9ADEN PVI OS=Fowl aviadenovirus C OX=190063 GN=pVI PE=4 SV=1
MM1 pKa = 7.68SILISPNNNTGWGMRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84SRR20 pKa = 11.84SSSMRR25 pKa = 11.84GVGMRR30 pKa = 11.84RR31 pKa = 11.84RR32 pKa = 11.84ARR34 pKa = 11.84PLTLRR39 pKa = 11.84SLLGLGTRR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84RR50 pKa = 11.84GSRR53 pKa = 11.84RR54 pKa = 11.84SRR56 pKa = 11.84PRR58 pKa = 11.84TTSRR62 pKa = 11.84LVVVRR67 pKa = 11.84TRR69 pKa = 11.84TSSMRR74 pKa = 11.84RR75 pKa = 11.84RR76 pKa = 11.84RR77 pKa = 3.5

Molecular weight: 9.04 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

36

1

37

12476

45

1251

337.2

37.93

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.382 ± 0.378

1.916 ± 0.278

5.418 ± 0.272

5.683 ± 0.492

4.328 ± 0.258

6.332 ± 0.465

2.461 ± 0.243

4.304 ± 0.229

3.719 ± 0.323

8.913 ± 0.31

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.621 ± 0.166

4.352 ± 0.381

6.917 ± 0.269

4.048 ± 0.263

6.789 ± 0.53

6.813 ± 0.353

6.549 ± 0.58

6.084 ± 0.325

1.347 ± 0.104

4.024 ± 0.271
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski