Aurantimonas sp. 22II-16-19i

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Hyphomicrobiales; Aurantimonadaceae; Aurantimonas; unclassified Aurantimonas

Average proteome isoelectric point is 6.28

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5291 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1X0SV04|A0A1X0SV04_9RHIZ Translation initiation factor IF-2 (Fragment) OS=Aurantimonas sp. 22II-16-19i OX=1317114 GN=infB PE=4 SV=1
MM1 pKa = 7.3VFNIHH6 pKa = 6.31YY7 pKa = 10.41DD8 pKa = 3.34VAAFNNLAGLLSIQVLEE25 pKa = 4.58PEE27 pKa = 4.37NNADD31 pKa = 3.56SGLNGLRR38 pKa = 11.84GSAAFNFFNEE48 pKa = 4.16LGVPIEE54 pKa = 4.93DD55 pKa = 4.3GPLGALGIFVEE66 pKa = 5.06GPGDD70 pKa = 3.59IDD72 pKa = 5.45DD73 pKa = 4.95PATDD77 pKa = 3.96VYY79 pKa = 9.65HH80 pKa = 5.14TTYY83 pKa = 11.25AHH85 pKa = 4.52VHH87 pKa = 4.88GVEE90 pKa = 4.31EE91 pKa = 4.42NLTDD95 pKa = 3.75TPLGTNTFDD104 pKa = 3.23SGLAITPGEE113 pKa = 4.01YY114 pKa = 10.23LAPNVITVNGRR125 pKa = 11.84IPTFATGEE133 pKa = 3.86LWQPVTLHH141 pKa = 5.16QRR143 pKa = 11.84QVIDD147 pKa = 3.34KK148 pKa = 10.4DD149 pKa = 3.91DD150 pKa = 3.66YY151 pKa = 10.22FTINFYY157 pKa = 10.92VKK159 pKa = 9.94PGAVQQVPGQKK170 pKa = 9.49PVASANFSTSYY181 pKa = 11.07SLSTDD186 pKa = 3.46ALPHH190 pKa = 5.15YY191 pKa = 10.58AFYY194 pKa = 11.54ANMFDD199 pKa = 4.22PGVGLNSLGDD209 pKa = 3.29ILFYY213 pKa = 10.9SEE215 pKa = 4.54NSIQIGYY222 pKa = 10.47DD223 pKa = 3.39DD224 pKa = 5.2GDD226 pKa = 3.45QGNYY230 pKa = 9.08TIYY233 pKa = 10.43TGDD236 pKa = 3.42FKK238 pKa = 11.43FEE240 pKa = 4.13EE241 pKa = 4.78DD242 pKa = 3.46ASTGNVFLVEE252 pKa = 4.11GFISQIDD259 pKa = 3.6HH260 pKa = 5.84QYY262 pKa = 10.05YY263 pKa = 8.03YY264 pKa = 10.43HH265 pKa = 7.84DD266 pKa = 3.93YY267 pKa = 10.43SVTPEE272 pKa = 3.93VYY274 pKa = 10.73YY275 pKa = 11.01SGLWTASSVGITAAEE290 pKa = 3.85ARR292 pKa = 11.84DD293 pKa = 4.11LFGQDD298 pKa = 2.83FSEE301 pKa = 5.27RR302 pKa = 11.84IFRR305 pKa = 11.84GNDD308 pKa = 3.06TLKK311 pKa = 11.02GSTEE315 pKa = 3.95ADD317 pKa = 3.24RR318 pKa = 11.84LFAFAGNDD326 pKa = 3.27ILIGGAGADD335 pKa = 3.63QLNGGTGSDD344 pKa = 3.31TASYY348 pKa = 10.59AGSLSVRR355 pKa = 11.84VNLTNGRR362 pKa = 11.84GSFGDD367 pKa = 3.5AEE369 pKa = 4.65GDD371 pKa = 3.67VLIGIEE377 pKa = 4.42NITGSEE383 pKa = 4.05RR384 pKa = 11.84ADD386 pKa = 3.41TLLGNSGANVINGEE400 pKa = 4.07GGFDD404 pKa = 4.1EE405 pKa = 4.12IHH407 pKa = 6.83GYY409 pKa = 10.2AGNDD413 pKa = 2.96RR414 pKa = 11.84LYY416 pKa = 11.2GGNGLDD422 pKa = 4.45KK423 pKa = 11.08LYY425 pKa = 11.39GDD427 pKa = 5.4FNADD431 pKa = 3.41MLFGGAGGDD440 pKa = 3.88TLSGGAGPDD449 pKa = 3.14KK450 pKa = 11.25VYY452 pKa = 11.27GEE454 pKa = 4.64SGNDD458 pKa = 3.63NIVGDD463 pKa = 4.26ADD465 pKa = 3.72GSEE468 pKa = 4.02DD469 pKa = 3.96VYY471 pKa = 11.77DD472 pKa = 4.59GGTEE476 pKa = 3.88IDD478 pKa = 3.72TVDD481 pKa = 3.52YY482 pKa = 10.7GAVASAINVNLSLNFAMGAPIGTDD506 pKa = 2.79RR507 pKa = 11.84IFAVEE512 pKa = 4.87RR513 pKa = 11.84ILAGAGNDD521 pKa = 3.61KK522 pKa = 9.95LTGNAFTTLLSGAGGNDD539 pKa = 3.5VIVGGIGDD547 pKa = 3.74NKK549 pKa = 10.68LYY551 pKa = 11.11GGDD554 pKa = 3.19GHH556 pKa = 7.52DD557 pKa = 4.11NLRR560 pKa = 11.84GLAGFDD566 pKa = 3.2QFFGGNGNDD575 pKa = 3.55RR576 pKa = 11.84MQGDD580 pKa = 4.49FNADD584 pKa = 3.12TFIFANGFGRR594 pKa = 11.84DD595 pKa = 3.5VIADD599 pKa = 4.12FEE601 pKa = 4.48ALNAAEE607 pKa = 4.93QIDD610 pKa = 4.35LSGVTNITSFADD622 pKa = 3.75LAANHH627 pKa = 6.87LSQVGGNAVITDD639 pKa = 4.21GFNTITLNGVAIGDD653 pKa = 4.18LDD655 pKa = 3.57ATDD658 pKa = 5.74FIFF661 pKa = 5.37

Molecular weight: 69.38 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1X0T213|A0A1X0T213_9RHIZ Putative major facilitator superfamily MFS-1 OS=Aurantimonas sp. 22II-16-19i OX=1317114 GN=ATO4_13590 PE=4 SV=1
MM1 pKa = 7.35KK2 pKa = 9.4RR3 pKa = 11.84TYY5 pKa = 10.2QPSRR9 pKa = 11.84LVRR12 pKa = 11.84KK13 pKa = 9.21RR14 pKa = 11.84RR15 pKa = 11.84HH16 pKa = 4.48GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.33SGQKK29 pKa = 9.93VIAARR34 pKa = 11.84RR35 pKa = 11.84SRR37 pKa = 11.84GRR39 pKa = 11.84KK40 pKa = 8.96RR41 pKa = 11.84LSAA44 pKa = 4.03

Molecular weight: 5.21 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5291

0

5291

1651721

17

3005

312.2

33.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

13.287 ± 0.06

0.788 ± 0.01

5.905 ± 0.032

6.004 ± 0.031

3.752 ± 0.025

9.037 ± 0.048

1.86 ± 0.017

5.045 ± 0.028

2.89 ± 0.029

9.847 ± 0.042

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.433 ± 0.014

2.295 ± 0.021

5.204 ± 0.032

2.791 ± 0.019

7.355 ± 0.038

5.429 ± 0.023

5.315 ± 0.025

7.475 ± 0.029

1.205 ± 0.014

2.084 ± 0.018
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski