Amino acid dipepetide frequency for Avon-Heathcote Estuary associated kieseladnavirus (AHEaBV) (Avon-Heathcote Estuary associated bacilladnavirus)

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
8.214AlaAla: 8.214 ± 2.663
0.684AlaCys: 0.684 ± 0.557
4.791AlaAsp: 4.791 ± 0.974
4.791AlaGlu: 4.791 ± 1.501
4.791AlaPhe: 4.791 ± 2.113
3.422AlaGly: 3.422 ± 1.459
1.369AlaHis: 1.369 ± 0.856
2.738AlaIle: 2.738 ± 0.776
4.107AlaLys: 4.107 ± 2.307
8.214AlaLeu: 8.214 ± 2.724
2.053AlaMet: 2.053 ± 0.943
4.791AlaAsn: 4.791 ± 3.899
2.053AlaPro: 2.053 ± 0.862
3.422AlaGln: 3.422 ± 1.536
5.476AlaArg: 5.476 ± 1.496
6.16AlaSer: 6.16 ± 1.875
4.107AlaThr: 4.107 ± 1.048
2.053AlaVal: 2.053 ± 1.038
0.684AlaTrp: 0.684 ± 0.528
1.369AlaTyr: 1.369 ± 0.856
0.0AlaXaa: 0.0 ± 0.0
Cys
2.053CysAla: 2.053 ± 0.943
1.369CysCys: 1.369 ± 0.739
2.053CysAsp: 2.053 ± 0.943
0.0CysGlu: 0.0 ± 0.0
2.053CysPhe: 2.053 ± 1.157
0.684CysGly: 0.684 ± 0.462
1.369CysHis: 1.369 ± 0.894
0.684CysIle: 0.684 ± 0.528
0.0CysLys: 0.0 ± 0.0
3.422CysLeu: 3.422 ± 2.114
0.0CysMet: 0.0 ± 0.0
0.684CysAsn: 0.684 ± 0.557
0.0CysPro: 0.0 ± 0.0
0.0CysGln: 0.0 ± 0.0
2.053CysArg: 2.053 ± 0.949
1.369CysSer: 1.369 ± 0.609
0.0CysThr: 0.0 ± 0.0
1.369CysVal: 1.369 ± 0.56
0.684CysTrp: 0.684 ± 0.462
0.0CysTyr: 0.0 ± 0.0
0.0CysXaa: 0.0 ± 0.0
Asp
4.791AspAla: 4.791 ± 1.154
1.369AspCys: 1.369 ± 0.609
6.845AspAsp: 6.845 ± 1.862
4.107AspGlu: 4.107 ± 1.658
3.422AspPhe: 3.422 ± 0.863
4.791AspGly: 4.791 ± 1.761
1.369AspHis: 1.369 ± 0.56
2.738AspIle: 2.738 ± 1.493
4.107AspLys: 4.107 ± 1.163
6.845AspLeu: 6.845 ± 2.076
1.369AspMet: 1.369 ± 0.795
2.738AspAsn: 2.738 ± 1.656
4.791AspPro: 4.791 ± 1.523
2.738AspGln: 2.738 ± 1.12
3.422AspArg: 3.422 ± 1.535
4.107AspSer: 4.107 ± 3.488
4.791AspThr: 4.791 ± 1.266
4.107AspVal: 4.107 ± 1.457
2.738AspTrp: 2.738 ± 1.12
0.684AspTyr: 0.684 ± 0.557
0.0AspXaa: 0.0 ± 0.0
Glu
2.053GluAla: 2.053 ± 0.964
1.369GluCys: 1.369 ± 0.933
3.422GluAsp: 3.422 ± 1.728
2.053GluGlu: 2.053 ± 0.949
2.053GluPhe: 2.053 ± 1.052
0.684GluGly: 0.684 ± 0.557
1.369GluHis: 1.369 ± 0.932
4.107GluIle: 4.107 ± 1.724
2.738GluLys: 2.738 ± 0.776
5.476GluLeu: 5.476 ± 2.944
1.369GluMet: 1.369 ± 1.827
2.053GluAsn: 2.053 ± 0.862
2.738GluPro: 2.738 ± 1.345
0.684GluGln: 0.684 ± 0.557
2.738GluArg: 2.738 ± 0.77
6.16GluSer: 6.16 ± 0.611
4.107GluThr: 4.107 ± 0.954
3.422GluVal: 3.422 ± 1.527
2.053GluTrp: 2.053 ± 0.906
2.053GluTyr: 2.053 ± 2.74
0.0GluXaa: 0.0 ± 0.0
Phe
3.422PheAla: 3.422 ± 1.134
1.369PheCys: 1.369 ± 0.739
2.738PheAsp: 2.738 ± 0.978
2.053PheGlu: 2.053 ± 0.862
3.422PhePhe: 3.422 ± 1.213
2.738PheGly: 2.738 ± 0.978
1.369PheHis: 1.369 ± 1.114
2.053PheIle: 2.053 ± 0.862
4.107PheLys: 4.107 ± 1.409
4.791PheLeu: 4.791 ± 2.274
2.053PheMet: 2.053 ± 1.178
1.369PheAsn: 1.369 ± 0.609
2.738PhePro: 2.738 ± 0.978
1.369PheGln: 1.369 ± 0.923
1.369PheArg: 1.369 ± 1.056
3.422PheSer: 3.422 ± 1.55
2.738PheThr: 2.738 ± 0.781
2.738PheVal: 2.738 ± 1.048
1.369PheTrp: 1.369 ± 0.609
0.684PheTyr: 0.684 ± 0.462
0.0PheXaa: 0.0 ± 0.0
Gly
4.107GlyAla: 4.107 ± 1.315
0.0GlyCys: 0.0 ± 0.0
4.791GlyAsp: 4.791 ± 3.435
2.053GlyGlu: 2.053 ± 1.052
2.053GlyPhe: 2.053 ± 0.862
6.16GlyGly: 6.16 ± 1.997
0.684GlyHis: 0.684 ± 0.557
3.422GlyIle: 3.422 ± 1.468
4.791GlyLys: 4.791 ± 1.362
4.791GlyLeu: 4.791 ± 2.551
1.369GlyMet: 1.369 ± 0.95
3.422GlyAsn: 3.422 ± 1.544
1.369GlyPro: 1.369 ± 0.923
3.422GlyGln: 3.422 ± 1.095
1.369GlyArg: 1.369 ± 0.609
4.791GlySer: 4.791 ± 1.666
4.107GlyThr: 4.107 ± 0.657
1.369GlyVal: 1.369 ± 0.932
2.053GlyTrp: 2.053 ± 0.862
0.0GlyTyr: 0.0 ± 0.0
0.0GlyXaa: 0.0 ± 0.0
His
0.684HisAla: 0.684 ± 0.462
2.053HisCys: 2.053 ± 1.157
3.422HisAsp: 3.422 ± 1.544
1.369HisGlu: 1.369 ± 0.56
0.684HisPhe: 0.684 ± 0.462
1.369HisGly: 1.369 ± 0.933
0.684HisHis: 0.684 ± 0.91
2.053HisIle: 2.053 ± 0.862
1.369HisLys: 1.369 ± 0.609
0.684HisLeu: 0.684 ± 0.557
0.684HisMet: 0.684 ± 0.557
0.0HisAsn: 0.0 ± 0.0
2.053HisPro: 2.053 ± 1.385
1.369HisGln: 1.369 ± 0.609
0.684HisArg: 0.684 ± 0.557
0.684HisSer: 0.684 ± 0.462
2.053HisThr: 2.053 ± 1.176
4.791HisVal: 4.791 ± 1.355
0.0HisTrp: 0.0 ± 0.0
1.369HisTyr: 1.369 ± 0.932
0.0HisXaa: 0.0 ± 0.0
Ile
2.053IleAla: 2.053 ± 0.964
0.684IleCys: 0.684 ± 0.528
4.791IleAsp: 4.791 ± 3.294
5.476IleGlu: 5.476 ± 3.267
1.369IlePhe: 1.369 ± 1.114
2.738IleGly: 2.738 ± 0.858
2.738IleHis: 2.738 ± 1.354
2.053IleIle: 2.053 ± 1.052
1.369IleLys: 1.369 ± 0.56
5.476IleLeu: 5.476 ± 2.097
1.369IleMet: 1.369 ± 0.856
2.738IleAsn: 2.738 ± 1.233
2.738IlePro: 2.738 ± 1.213
1.369IleGln: 1.369 ± 0.56
4.107IleArg: 4.107 ± 0.972
2.738IleSer: 2.738 ± 0.858
2.053IleThr: 2.053 ± 1.385
1.369IleVal: 1.369 ± 0.95
2.053IleTrp: 2.053 ± 0.943
0.684IleTyr: 0.684 ± 0.462
0.0IleXaa: 0.0 ± 0.0
Lys
2.738LysAla: 2.738 ± 1.526
0.684LysCys: 0.684 ± 0.528
2.053LysAsp: 2.053 ± 1.028
1.369LysGlu: 1.369 ± 0.856
2.053LysPhe: 2.053 ± 1.028
4.107LysGly: 4.107 ± 2.142
2.053LysHis: 2.053 ± 0.943
2.053LysIle: 2.053 ± 0.862
5.476LysLys: 5.476 ± 2.212
2.053LysLeu: 2.053 ± 0.654
2.738LysMet: 2.738 ± 1.213
2.053LysAsn: 2.053 ± 0.698
5.476LysPro: 5.476 ± 2.232
2.053LysGln: 2.053 ± 1.709
4.791LysArg: 4.791 ± 2.489
2.053LysSer: 2.053 ± 1.709
4.791LysThr: 4.791 ± 1.007
3.422LysVal: 3.422 ± 1.459
1.369LysTrp: 1.369 ± 0.609
1.369LysTyr: 1.369 ± 1.004
0.0LysXaa: 0.0 ± 0.0
Leu
6.845LeuAla: 6.845 ± 1.439
1.369LeuCys: 1.369 ± 0.609
3.422LeuAsp: 3.422 ± 1.095
4.107LeuGlu: 4.107 ± 0.872
4.107LeuPhe: 4.107 ± 1.646
4.791LeuGly: 4.791 ± 1.92
2.738LeuHis: 2.738 ± 1.541
6.845LeuIle: 6.845 ± 3.701
3.422LeuLys: 3.422 ± 1.697
10.267LeuLeu: 10.267 ± 1.483
2.738LeuMet: 2.738 ± 1.74
3.422LeuAsn: 3.422 ± 1.009
6.845LeuPro: 6.845 ± 2.641
2.738LeuGln: 2.738 ± 0.705
4.791LeuArg: 4.791 ± 1.602
6.16LeuSer: 6.16 ± 2.791
8.214LeuThr: 8.214 ± 2.353
3.422LeuVal: 3.422 ± 1.798
0.684LeuTrp: 0.684 ± 0.557
2.738LeuTyr: 2.738 ± 2.674
0.0LeuXaa: 0.0 ± 0.0
Met
2.738MetAla: 2.738 ± 0.994
0.684MetCys: 0.684 ± 0.91
1.369MetAsp: 1.369 ± 0.932
0.684MetGlu: 0.684 ± 0.91
3.422MetPhe: 3.422 ± 1.526
0.0MetGly: 0.0 ± 0.0
1.369MetHis: 1.369 ± 1.114
1.369MetIle: 1.369 ± 1.004
0.684MetLys: 0.684 ± 0.528
2.738MetLeu: 2.738 ± 1.181
1.369MetMet: 1.369 ± 0.897
0.684MetAsn: 0.684 ± 0.528
0.684MetPro: 0.684 ± 0.528
0.684MetGln: 0.684 ± 0.557
2.053MetArg: 2.053 ± 2.74
2.738MetSer: 2.738 ± 1.048
0.684MetThr: 0.684 ± 0.557
0.684MetVal: 0.684 ± 0.557
0.684MetTrp: 0.684 ± 0.528
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
5.476AsnAla: 5.476 ± 1.79
0.684AsnCys: 0.684 ± 0.557
1.369AsnAsp: 1.369 ± 0.739
4.107AsnGlu: 4.107 ± 2.691
0.684AsnPhe: 0.684 ± 0.91
2.738AsnGly: 2.738 ± 1.073
0.684AsnHis: 0.684 ± 0.462
0.684AsnIle: 0.684 ± 0.91
0.684AsnLys: 0.684 ± 0.528
2.053AsnLeu: 2.053 ± 1.028
0.0AsnMet: 0.0 ± 0.0
1.369AsnAsn: 1.369 ± 1.114
1.369AsnPro: 1.369 ± 0.56
2.053AsnGln: 2.053 ± 1.671
1.369AsnArg: 1.369 ± 1.827
5.476AsnSer: 5.476 ± 2.103
2.738AsnThr: 2.738 ± 1.541
3.422AsnVal: 3.422 ± 1.095
0.0AsnTrp: 0.0 ± 0.0
2.738AsnTyr: 2.738 ± 1.073
0.0AsnXaa: 0.0 ± 0.0
Pro
4.791ProAla: 4.791 ± 1.95
0.0ProCys: 0.0 ± 0.0
3.422ProAsp: 3.422 ± 1.28
3.422ProGlu: 3.422 ± 1.728
2.738ProPhe: 2.738 ± 1.12
4.791ProGly: 4.791 ± 1.324
0.684ProHis: 0.684 ± 0.462
1.369ProIle: 1.369 ± 1.056
2.053ProLys: 2.053 ± 0.698
4.107ProLeu: 4.107 ± 1.524
0.0ProMet: 0.0 ± 0.0
0.0ProAsn: 0.0 ± 0.0
4.107ProPro: 4.107 ± 1.201
2.053ProGln: 2.053 ± 1.155
3.422ProArg: 3.422 ± 1.66
4.107ProSer: 4.107 ± 1.636
4.107ProThr: 4.107 ± 1.907
3.422ProVal: 3.422 ± 0.876
0.684ProTrp: 0.684 ± 0.913
0.0ProTyr: 0.0 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
4.791GlnAla: 4.791 ± 2.408
1.369GlnCys: 1.369 ± 0.923
2.738GlnAsp: 2.738 ± 0.77
3.422GlnGlu: 3.422 ± 1.378
2.738GlnPhe: 2.738 ± 1.541
0.684GlnGly: 0.684 ± 0.913
0.0GlnHis: 0.0 ± 0.0
0.684GlnIle: 0.684 ± 0.913
2.053GlnLys: 2.053 ± 1.028
2.053GlnLeu: 2.053 ± 1.238
0.0GlnMet: 0.0 ± 0.0
2.053GlnAsn: 2.053 ± 1.671
3.422GlnPro: 3.422 ± 0.91
2.738GlnGln: 2.738 ± 1.181
3.422GlnArg: 3.422 ± 1.378
0.684GlnSer: 0.684 ± 0.557
2.053GlnThr: 2.053 ± 1.017
0.684GlnVal: 0.684 ± 0.91
0.0GlnTrp: 0.0 ± 0.0
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
4.791ArgAla: 4.791 ± 0.678
1.369ArgCys: 1.369 ± 1.004
4.791ArgAsp: 4.791 ± 1.3
4.107ArgGlu: 4.107 ± 1.362
4.107ArgPhe: 4.107 ± 1.293
1.369ArgGly: 1.369 ± 0.894
0.684ArgHis: 0.684 ± 0.462
2.053ArgIle: 2.053 ± 1.038
3.422ArgLys: 3.422 ± 1.66
4.791ArgLeu: 4.791 ± 1.602
0.684ArgMet: 0.684 ± 0.442
2.053ArgAsn: 2.053 ± 1.038
2.053ArgPro: 2.053 ± 1.709
0.684ArgGln: 0.684 ± 0.557
7.529ArgArg: 7.529 ± 2.351
6.16ArgSer: 6.16 ± 1.327
3.422ArgThr: 3.422 ± 1.666
5.476ArgVal: 5.476 ± 1.309
0.0ArgTrp: 0.0 ± 0.0
0.684ArgTyr: 0.684 ± 0.462
0.0ArgXaa: 0.0 ± 0.0
Ser
5.476SerAla: 5.476 ± 1.164
3.422SerCys: 3.422 ± 1.519
5.476SerAsp: 5.476 ± 3.42
3.422SerGlu: 3.422 ± 1.765
2.738SerPhe: 2.738 ± 1.154
2.738SerGly: 2.738 ± 0.858
2.053SerHis: 2.053 ± 0.654
2.053SerIle: 2.053 ± 1.052
4.791SerLys: 4.791 ± 2.237
9.582SerLeu: 9.582 ± 2.472
1.369SerMet: 1.369 ± 0.95
3.422SerAsn: 3.422 ± 1.544
0.684SerPro: 0.684 ± 0.91
2.738SerGln: 2.738 ± 1.181
4.791SerArg: 4.791 ± 2.414
2.738SerSer: 2.738 ± 1.154
7.529SerThr: 7.529 ± 2.706
4.107SerVal: 4.107 ± 0.972
2.053SerTrp: 2.053 ± 1.028
1.369SerTyr: 1.369 ± 1.114
0.0SerXaa: 0.0 ± 0.0
Thr
6.845ThrAla: 6.845 ± 3.997
0.0ThrCys: 0.0 ± 0.0
3.422ThrAsp: 3.422 ± 3.018
3.422ThrGlu: 3.422 ± 1.526
3.422ThrPhe: 3.422 ± 1.526
5.476ThrGly: 5.476 ± 1.694
0.684ThrHis: 0.684 ± 0.528
4.107ThrIle: 4.107 ± 1.315
3.422ThrLys: 3.422 ± 1.728
6.16ThrLeu: 6.16 ± 1.759
3.422ThrMet: 3.422 ± 1.097
1.369ThrAsn: 1.369 ± 1.114
4.107ThrPro: 4.107 ± 1.335
2.738ThrGln: 2.738 ± 1.073
1.369ThrArg: 1.369 ± 0.894
6.845ThrSer: 6.845 ± 2.057
9.582ThrThr: 9.582 ± 4.117
3.422ThrVal: 3.422 ± 1.468
1.369ThrTrp: 1.369 ± 0.923
0.684ThrTyr: 0.684 ± 0.557
0.0ThrXaa: 0.0 ± 0.0
Val
1.369ValAla: 1.369 ± 0.856
0.684ValCys: 0.684 ± 0.528
6.16ValAsp: 6.16 ± 2.539
0.684ValGlu: 0.684 ± 0.913
0.684ValPhe: 0.684 ± 0.462
4.791ValGly: 4.791 ± 2.461
4.107ValHis: 4.107 ± 1.658
5.476ValIle: 5.476 ± 1.587
4.791ValLys: 4.791 ± 3.361
4.107ValLeu: 4.107 ± 2.587
2.053ValMet: 2.053 ± 1.157
3.422ValAsn: 3.422 ± 0.631
1.369ValPro: 1.369 ± 0.856
2.053ValGln: 2.053 ± 1.176
3.422ValArg: 3.422 ± 1.437
3.422ValSer: 3.422 ± 2.583
2.053ValThr: 2.053 ± 0.862
6.16ValVal: 6.16 ± 2.004
0.684ValTrp: 0.684 ± 0.462
0.684ValTyr: 0.684 ± 0.557
0.0ValXaa: 0.0 ± 0.0
Trp
1.369TrpAla: 1.369 ± 0.923
0.684TrpCys: 0.684 ± 0.462
2.738TrpAsp: 2.738 ± 0.858
0.684TrpGlu: 0.684 ± 0.557
0.684TrpPhe: 0.684 ± 0.462
1.369TrpGly: 1.369 ± 0.923
0.0TrpHis: 0.0 ± 0.0
1.369TrpIle: 1.369 ± 0.609
0.0TrpLys: 0.0 ± 0.0
1.369TrpLeu: 1.369 ± 0.609
0.0TrpMet: 0.0 ± 0.0
1.369TrpAsn: 1.369 ± 0.932
0.684TrpPro: 0.684 ± 0.462
0.0TrpGln: 0.0 ± 0.0
1.369TrpArg: 1.369 ± 0.739
2.053TrpSer: 2.053 ± 1.162
1.369TrpThr: 1.369 ± 0.856
0.684TrpVal: 0.684 ± 0.462
0.684TrpTrp: 0.684 ± 0.557
2.053TrpTyr: 2.053 ± 0.654
0.0TrpXaa: 0.0 ± 0.0
Tyr
0.684TyrAla: 0.684 ± 0.557
0.0TyrCys: 0.0 ± 0.0
2.053TyrAsp: 2.053 ± 0.654
1.369TyrGlu: 1.369 ± 0.933
1.369TyrPhe: 1.369 ± 0.932
0.684TyrGly: 0.684 ± 0.462
2.053TyrHis: 2.053 ± 1.038
2.053TyrIle: 2.053 ± 1.238
1.369TyrLys: 1.369 ± 0.856
0.684TyrLeu: 0.684 ± 0.557
0.0TyrMet: 0.0 ± 0.0
0.684TyrAsn: 0.684 ± 0.462
0.0TyrPro: 0.0 ± 0.0
0.684TyrGln: 0.684 ± 0.913
0.684TyrArg: 0.684 ± 0.462
0.684TyrSer: 0.684 ± 0.557
1.369TyrThr: 1.369 ± 0.856
2.053TyrVal: 2.053 ± 0.886
0.684TyrTrp: 0.684 ± 0.91
1.369TyrTyr: 1.369 ± 0.56
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 5 proteins (1462 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski