TM7 phylum sp. oral taxon 348

Taxonomy: cellular organisms; Bacteria; Bacteria incertae sedis; Bacteria candidate phyla; Candidatus Saccharibacteria

Average proteome isoelectric point is 7.07

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 855 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A563CR36|A0A563CR36_9BACT Uncharacterized protein OS=TM7 phylum sp. oral taxon 348 OX=671231 GN=EUA62_01715 PE=4 SV=1
MM1 pKa = 6.77STSSIYY7 pKa = 9.26YY8 pKa = 7.82TATDD12 pKa = 3.08VPMRR16 pKa = 11.84NEE18 pKa = 3.62SWHH21 pKa = 6.63AEE23 pKa = 4.01QAFKK27 pKa = 10.71SYY29 pKa = 11.33KK30 pKa = 10.36LGGEE34 pKa = 4.04LWFSCVLYY42 pKa = 10.43IVTACVGFVGLFAIDD57 pKa = 5.17SSDD60 pKa = 3.48CPNIVLEE67 pKa = 4.5IFAKK71 pKa = 10.17IYY73 pKa = 8.94FASMCMLGIGYY84 pKa = 9.2LAFAAKK90 pKa = 10.18RR91 pKa = 11.84LMYY94 pKa = 9.99RR95 pKa = 11.84KK96 pKa = 9.81YY97 pKa = 9.9YY98 pKa = 10.36SKK100 pKa = 10.41PSRR103 pKa = 11.84GKK105 pKa = 10.4GEE107 pKa = 4.58LYY109 pKa = 10.24RR110 pKa = 11.84IDD112 pKa = 4.15IIEE115 pKa = 4.9PNDD118 pKa = 4.42DD119 pKa = 3.15DD120 pKa = 4.11WGIQFTSPNGVFTYY134 pKa = 11.04LNLGCDD140 pKa = 4.75LEE142 pKa = 4.9CSMYY146 pKa = 10.65AIEE149 pKa = 5.56LLQFDD154 pKa = 4.1ADD156 pKa = 3.94FRR158 pKa = 11.84SEE160 pKa = 4.08INSYY164 pKa = 10.54LADD167 pKa = 3.86PVNKK171 pKa = 9.87KK172 pKa = 10.21VSTEE176 pKa = 3.54EE177 pKa = 4.15MINSKK182 pKa = 11.02YY183 pKa = 10.74EE184 pKa = 4.01DD185 pKa = 3.84LCDD188 pKa = 4.2DD189 pKa = 4.49RR190 pKa = 11.84PSEE193 pKa = 5.9DD194 pKa = 3.71EE195 pKa = 5.26DD196 pKa = 4.36EE197 pKa = 5.15DD198 pKa = 3.91DD199 pKa = 5.34GRR201 pKa = 11.84YY202 pKa = 9.91VDD204 pKa = 5.44DD205 pKa = 5.1KK206 pKa = 11.42FVV208 pKa = 2.96

Molecular weight: 23.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A563CML3|A0A563CML3_9BACT Transcriptional repressor NrdR OS=TM7 phylum sp. oral taxon 348 OX=671231 GN=nrdR PE=3 SV=1
MM1 pKa = 8.03PKK3 pKa = 8.98RR4 pKa = 11.84TYY6 pKa = 10.09QPHH9 pKa = 5.49KK10 pKa = 9.24RR11 pKa = 11.84SRR13 pKa = 11.84AKK15 pKa = 10.04VHH17 pKa = 5.81GFRR20 pKa = 11.84ARR22 pKa = 11.84MSSRR26 pKa = 11.84AGRR29 pKa = 11.84LVLKK33 pKa = 10.41RR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84NKK38 pKa = 9.64KK39 pKa = 8.43RR40 pKa = 11.84AKK42 pKa = 9.93IAII45 pKa = 4.09

Molecular weight: 5.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

855

0

855

263325

38

1286

308.0

34.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.522 ± 0.086

0.697 ± 0.024

5.968 ± 0.077

5.941 ± 0.082

3.799 ± 0.063

6.459 ± 0.071

1.814 ± 0.035

8.192 ± 0.091

7.104 ± 0.083

9.131 ± 0.094

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.305 ± 0.034

5.261 ± 0.073

3.713 ± 0.07

3.671 ± 0.055

5.124 ± 0.069

7.068 ± 0.091

5.259 ± 0.056

6.521 ± 0.069

0.96 ± 0.032

3.491 ± 0.055
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski