Amino acid dipepetide frequency for Alces alces faeces associated circular virus MP65

Apart from single amino acid frequencies one can also calculate so called amino acid dipeptide frequency.

There is 400 possibilites (441 if we consider Xaa as additional 21st amino acid representing all non-standard or unknown amino acids). Thus, if the dipeptides would be present randomly in proteins each amino acid dipeptide should be present with 0.25% frequency. As it is not the case in the nature, for better visablity all more than expected dipepetides are marked by red, and those which are underrepresented are marked by blue in the table.

All values are presented as per milles (‰), therefore need to be multiplied by 10-3.

For more information see sequence space article on Wikipedia.

AlaCysAspGluPheGlyHisIleLysLeuMetAsnProGlnArgSerThrValTrpTyrXaa
Ala
7.782AlaAla: 7.782 ± 3.501
0.0AlaCys: 0.0 ± 0.0
3.891AlaAsp: 3.891 ± 1.004
2.594AlaGlu: 2.594 ± 1.894
2.594AlaPhe: 2.594 ± 1.779
5.188AlaGly: 5.188 ± 1.951
0.0AlaHis: 0.0 ± 0.0
2.594AlaIle: 2.594 ± 1.779
5.188AlaLys: 5.188 ± 1.722
7.782AlaLeu: 7.782 ± 5.338
0.0AlaMet: 0.0 ± 0.0
2.594AlaAsn: 2.594 ± 1.779
3.891AlaPro: 3.891 ± 2.669
6.485AlaGln: 6.485 ± 0.775
6.485AlaArg: 6.485 ± 2.612
9.079AlaSer: 9.079 ± 0.718
9.079AlaThr: 9.079 ± 4.391
5.188AlaVal: 5.188 ± 0.114
3.891AlaTrp: 3.891 ± 1.004
1.297AlaTyr: 1.297 ± 0.89
0.0AlaXaa: 0.0 ± 0.0
Cys
1.297CysAla: 1.297 ± 0.947
0.0CysCys: 0.0 ± 0.0
0.0CysAsp: 0.0 ± 0.0
1.297CysGlu: 1.297 ± 0.89
0.0CysPhe: 0.0 ± 0.0
0.0CysGly: 0.0 ± 0.0
1.297CysHis: 1.297 ± 0.947
1.297CysIle: 1.297 ± 0.947
1.297CysLys: 1.297 ± 0.947
1.297CysLeu: 1.297 ± 0.947
0.0CysMet: 0.0 ± 0.0
1.297CysAsn: 1.297 ± 0.947
3.891CysPro: 3.891 ± 1.004
1.297CysGln: 1.297 ± 0.947
0.0CysArg: 0.0 ± 0.0
0.0CysSer: 0.0 ± 0.0
1.297CysThr: 1.297 ± 0.947
0.0CysVal: 0.0 ± 0.0
1.297CysTrp: 1.297 ± 0.947
2.594CysTyr: 2.594 ± 1.894
0.0CysXaa: 0.0 ± 0.0
Asp
1.297AspAla: 1.297 ± 0.947
0.0AspCys: 0.0 ± 0.0
6.485AspAsp: 6.485 ± 2.898
0.0AspGlu: 0.0 ± 0.0
7.782AspPhe: 7.782 ± 2.008
6.485AspGly: 6.485 ± 4.734
0.0AspHis: 0.0 ± 0.0
1.297AspIle: 1.297 ± 0.947
1.297AspLys: 1.297 ± 0.947
5.188AspLeu: 5.188 ± 1.951
0.0AspMet: 0.0 ± 0.0
2.594AspAsn: 2.594 ± 0.057
7.782AspPro: 7.782 ± 2.008
2.594AspGln: 2.594 ± 1.779
2.594AspArg: 2.594 ± 0.057
1.297AspSer: 1.297 ± 0.89
0.0AspThr: 0.0 ± 0.0
2.594AspVal: 2.594 ± 1.894
1.297AspTrp: 1.297 ± 0.947
3.891AspTyr: 3.891 ± 0.832
0.0AspXaa: 0.0 ± 0.0
Glu
2.594GluAla: 2.594 ± 1.779
0.0GluCys: 0.0 ± 0.0
0.0GluAsp: 0.0 ± 0.0
0.0GluGlu: 0.0 ± 0.0
1.297GluPhe: 1.297 ± 0.947
1.297GluGly: 1.297 ± 0.89
2.594GluHis: 2.594 ± 1.894
0.0GluIle: 0.0 ± 0.0
0.0GluLys: 0.0 ± 0.0
6.485GluLeu: 6.485 ± 0.775
0.0GluMet: 0.0 ± 0.659
3.891GluAsn: 3.891 ± 2.84
1.297GluPro: 1.297 ± 0.947
0.0GluGln: 0.0 ± 0.0
5.188GluArg: 5.188 ± 1.951
3.891GluSer: 3.891 ± 2.84
2.594GluThr: 2.594 ± 0.057
2.594GluVal: 2.594 ± 0.057
1.297GluTrp: 1.297 ± 0.947
0.0GluTyr: 0.0 ± 0.0
0.0GluXaa: 0.0 ± 0.0
Phe
2.594PheAla: 2.594 ± 1.779
1.297PheCys: 1.297 ± 0.947
1.297PheAsp: 1.297 ± 0.947
2.594PheGlu: 2.594 ± 1.894
0.0PhePhe: 0.0 ± 0.0
5.188PheGly: 5.188 ± 1.951
2.594PheHis: 2.594 ± 0.057
6.485PheIle: 6.485 ± 2.612
1.297PheLys: 1.297 ± 0.89
3.891PheLeu: 3.891 ± 2.84
0.0PheMet: 0.0 ± 0.0
1.297PheAsn: 1.297 ± 0.89
2.594PhePro: 2.594 ± 0.057
2.594PheGln: 2.594 ± 1.779
3.891PheArg: 3.891 ± 1.004
3.891PheSer: 3.891 ± 1.004
2.594PheThr: 2.594 ± 0.057
3.891PheVal: 3.891 ± 2.669
0.0PheTrp: 0.0 ± 0.0
2.594PheTyr: 2.594 ± 0.057
0.0PheXaa: 0.0 ± 0.0
Gly
6.485GlyAla: 6.485 ± 1.061
2.594GlyCys: 2.594 ± 1.894
3.891GlyAsp: 3.891 ± 0.832
0.0GlyGlu: 0.0 ± 0.0
2.594GlyPhe: 2.594 ± 0.057
10.376GlyGly: 10.376 ± 0.229
1.297GlyHis: 1.297 ± 0.947
3.891GlyIle: 3.891 ± 0.832
6.485GlyLys: 6.485 ± 2.898
7.782GlyLeu: 7.782 ± 1.665
0.0GlyMet: 0.0 ± 0.0
7.782GlyAsn: 7.782 ± 0.172
7.782GlyPro: 7.782 ± 1.665
6.485GlyGln: 6.485 ± 1.061
2.594GlyArg: 2.594 ± 1.894
3.891GlySer: 3.891 ± 0.832
5.188GlyThr: 5.188 ± 1.722
5.188GlyVal: 5.188 ± 1.951
1.297GlyTrp: 1.297 ± 0.947
2.594GlyTyr: 2.594 ± 1.779
0.0GlyXaa: 0.0 ± 0.0
His
1.297HisAla: 1.297 ± 0.947
3.891HisCys: 3.891 ± 2.84
1.297HisAsp: 1.297 ± 0.89
0.0HisGlu: 0.0 ± 0.0
3.891HisPhe: 3.891 ± 1.004
1.297HisGly: 1.297 ± 0.947
1.297HisHis: 1.297 ± 0.947
1.297HisIle: 1.297 ± 0.947
1.297HisLys: 1.297 ± 0.947
0.0HisLeu: 0.0 ± 0.0
0.0HisMet: 0.0 ± 0.0
1.297HisAsn: 1.297 ± 0.89
0.0HisPro: 0.0 ± 0.0
1.297HisGln: 1.297 ± 0.947
2.594HisArg: 2.594 ± 0.057
1.297HisSer: 1.297 ± 0.947
1.297HisThr: 1.297 ± 0.89
0.0HisVal: 0.0 ± 0.0
2.594HisTrp: 2.594 ± 0.057
1.297HisTyr: 1.297 ± 0.947
0.0HisXaa: 0.0 ± 0.0
Ile
3.891IleAla: 3.891 ± 1.004
3.891IleCys: 3.891 ± 0.832
1.297IleAsp: 1.297 ± 0.947
0.0IleGlu: 0.0 ± 0.0
2.594IlePhe: 2.594 ± 0.057
2.594IleGly: 2.594 ± 1.779
2.594IleHis: 2.594 ± 1.894
0.0IleIle: 0.0 ± 0.0
5.188IleLys: 5.188 ± 0.114
3.891IleLeu: 3.891 ± 2.84
0.0IleMet: 0.0 ± 0.0
3.891IleAsn: 3.891 ± 2.669
2.594IlePro: 2.594 ± 0.057
2.594IleGln: 2.594 ± 0.057
3.891IleArg: 3.891 ± 0.832
1.297IleSer: 1.297 ± 0.947
2.594IleThr: 2.594 ± 1.779
1.297IleVal: 1.297 ± 0.947
0.0IleTrp: 0.0 ± 0.0
0.0IleTyr: 0.0 ± 0.0
0.0IleXaa: 0.0 ± 0.0
Lys
5.188LysAla: 5.188 ± 0.114
0.0LysCys: 0.0 ± 0.0
3.891LysAsp: 3.891 ± 1.004
2.594LysGlu: 2.594 ± 1.894
1.297LysPhe: 1.297 ± 0.947
9.079LysGly: 9.079 ± 1.118
1.297LysHis: 1.297 ± 0.947
0.0LysIle: 0.0 ± 0.0
5.188LysLys: 5.188 ± 3.559
0.0LysLeu: 0.0 ± 0.0
1.297LysMet: 1.297 ± 0.89
5.188LysAsn: 5.188 ± 0.114
1.297LysPro: 1.297 ± 0.947
1.297LysGln: 1.297 ± 0.89
1.297LysArg: 1.297 ± 0.947
2.594LysSer: 2.594 ± 0.057
2.594LysThr: 2.594 ± 0.057
2.594LysVal: 2.594 ± 0.057
2.594LysTrp: 2.594 ± 0.057
3.891LysTyr: 3.891 ± 1.004
0.0LysXaa: 0.0 ± 0.0
Leu
14.267LeuAla: 14.267 ± 2.44
0.0LeuCys: 0.0 ± 0.0
3.891LeuAsp: 3.891 ± 2.84
3.891LeuGlu: 3.891 ± 1.004
5.188LeuPhe: 5.188 ± 0.114
6.485LeuGly: 6.485 ± 2.898
2.594LeuHis: 2.594 ± 1.894
2.594LeuIle: 2.594 ± 0.057
3.891LeuLys: 3.891 ± 1.004
1.297LeuLeu: 1.297 ± 0.947
0.0LeuMet: 0.0 ± 0.0
3.891LeuAsn: 3.891 ± 2.669
5.188LeuPro: 5.188 ± 1.722
1.297LeuGln: 1.297 ± 0.947
2.594LeuArg: 2.594 ± 1.894
5.188LeuSer: 5.188 ± 1.722
3.891LeuThr: 3.891 ± 1.004
7.782LeuVal: 7.782 ± 2.008
6.485LeuTrp: 6.485 ± 0.775
0.0LeuTyr: 0.0 ± 0.0
0.0LeuXaa: 0.0 ± 0.0
Met
0.0MetAla: 0.0 ± 0.0
0.0MetCys: 0.0 ± 0.0
0.0MetAsp: 0.0 ± 0.0
0.0MetGlu: 0.0 ± 0.0
1.297MetPhe: 1.297 ± 0.89
0.0MetGly: 0.0 ± 0.0
0.0MetHis: 0.0 ± 0.0
0.0MetIle: 0.0 ± 0.0
0.0MetLys: 0.0 ± 0.0
0.0MetLeu: 0.0 ± 0.0
0.0MetMet: 0.0 ± 0.0
1.297MetAsn: 1.297 ± 0.89
2.594MetPro: 2.594 ± 1.779
0.0MetGln: 0.0 ± 0.0
1.297MetArg: 1.297 ± 0.89
1.297MetSer: 1.297 ± 0.89
0.0MetThr: 0.0 ± 0.0
2.594MetVal: 2.594 ± 0.057
0.0MetTrp: 0.0 ± 0.0
0.0MetTyr: 0.0 ± 0.0
0.0MetXaa: 0.0 ± 0.0
Asn
3.891AsnAla: 3.891 ± 2.669
3.891AsnCys: 3.891 ± 2.84
3.891AsnAsp: 3.891 ± 1.004
0.0AsnGlu: 0.0 ± 0.0
2.594AsnPhe: 2.594 ± 0.057
3.891AsnGly: 3.891 ± 2.669
1.297AsnHis: 1.297 ± 0.947
2.594AsnIle: 2.594 ± 0.057
2.594AsnLys: 2.594 ± 0.057
0.0AsnLeu: 0.0 ± 0.0
0.0AsnMet: 0.0 ± 0.0
1.297AsnAsn: 1.297 ± 0.89
1.297AsnPro: 1.297 ± 0.89
6.485AsnGln: 6.485 ± 2.612
3.891AsnArg: 3.891 ± 2.669
2.594AsnSer: 2.594 ± 1.779
3.891AsnThr: 3.891 ± 2.669
1.297AsnVal: 1.297 ± 0.947
0.0AsnTrp: 0.0 ± 0.0
1.297AsnTyr: 1.297 ± 0.89
0.0AsnXaa: 0.0 ± 0.0
Pro
7.782ProAla: 7.782 ± 1.665
1.297ProCys: 1.297 ± 0.947
3.891ProAsp: 3.891 ± 1.004
1.297ProGlu: 1.297 ± 0.947
2.594ProPhe: 2.594 ± 1.779
3.891ProGly: 3.891 ± 1.004
1.297ProHis: 1.297 ± 0.947
5.188ProIle: 5.188 ± 0.114
2.594ProLys: 2.594 ± 1.894
7.782ProLeu: 7.782 ± 1.665
1.297ProMet: 1.297 ± 0.639
2.594ProAsn: 2.594 ± 1.779
2.594ProPro: 2.594 ± 0.057
1.297ProGln: 1.297 ± 0.947
3.891ProArg: 3.891 ± 0.832
5.188ProSer: 5.188 ± 1.951
3.891ProThr: 3.891 ± 0.832
2.594ProVal: 2.594 ± 1.779
0.0ProTrp: 0.0 ± 0.0
0.0ProTyr: 0.0 ± 0.0
0.0ProXaa: 0.0 ± 0.0
Gln
3.891GlnAla: 3.891 ± 2.669
0.0GlnCys: 0.0 ± 0.0
1.297GlnAsp: 1.297 ± 0.947
3.891GlnGlu: 3.891 ± 1.004
2.594GlnPhe: 2.594 ± 0.057
3.891GlnGly: 3.891 ± 2.669
2.594GlnHis: 2.594 ± 1.779
2.594GlnIle: 2.594 ± 0.057
2.594GlnLys: 2.594 ± 0.057
2.594GlnLeu: 2.594 ± 0.057
0.0GlnMet: 0.0 ± 0.0
0.0GlnAsn: 0.0 ± 0.0
1.297GlnPro: 1.297 ± 0.947
1.297GlnGln: 1.297 ± 0.947
7.782GlnArg: 7.782 ± 2.008
7.782GlnSer: 7.782 ± 1.665
2.594GlnThr: 2.594 ± 1.779
3.891GlnVal: 3.891 ± 0.832
1.297GlnTrp: 1.297 ± 0.947
0.0GlnTyr: 0.0 ± 0.0
0.0GlnXaa: 0.0 ± 0.0
Arg
2.594ArgAla: 2.594 ± 1.779
1.297ArgCys: 1.297 ± 0.947
3.891ArgAsp: 3.891 ± 2.669
5.188ArgGlu: 5.188 ± 3.559
1.297ArgPhe: 1.297 ± 0.89
2.594ArgGly: 2.594 ± 1.779
0.0ArgHis: 0.0 ± 0.0
3.891ArgIle: 3.891 ± 1.004
5.188ArgLys: 5.188 ± 1.951
7.782ArgLeu: 7.782 ± 2.008
1.297ArgMet: 1.297 ± 0.89
1.297ArgAsn: 1.297 ± 0.89
5.188ArgPro: 5.188 ± 3.787
5.188ArgGln: 5.188 ± 1.951
6.485ArgArg: 6.485 ± 1.061
2.594ArgSer: 2.594 ± 0.057
3.891ArgThr: 3.891 ± 0.832
1.297ArgVal: 1.297 ± 0.947
1.297ArgTrp: 1.297 ± 0.89
0.0ArgTyr: 0.0 ± 0.0
0.0ArgXaa: 0.0 ± 0.0
Ser
7.782SerAla: 7.782 ± 3.501
0.0SerCys: 0.0 ± 0.0
1.297SerAsp: 1.297 ± 0.947
2.594SerGlu: 2.594 ± 1.894
3.891SerPhe: 3.891 ± 1.004
5.188SerGly: 5.188 ± 1.722
2.594SerHis: 2.594 ± 1.779
2.594SerIle: 2.594 ± 0.057
1.297SerLys: 1.297 ± 0.89
10.376SerLeu: 10.376 ± 5.738
1.297SerMet: 1.297 ± 0.89
1.297SerAsn: 1.297 ± 0.947
0.0SerPro: 0.0 ± 0.0
5.188SerGln: 5.188 ± 1.722
2.594SerArg: 2.594 ± 0.057
7.782SerSer: 7.782 ± 3.501
3.891SerThr: 3.891 ± 2.669
2.594SerVal: 2.594 ± 1.894
0.0SerTrp: 0.0 ± 0.0
1.297SerTyr: 1.297 ± 0.89
0.0SerXaa: 0.0 ± 0.0
Thr
7.782ThrAla: 7.782 ± 5.338
0.0ThrCys: 0.0 ± 0.0
6.485ThrAsp: 6.485 ± 2.898
1.297ThrGlu: 1.297 ± 0.947
3.891ThrPhe: 3.891 ± 1.004
5.188ThrGly: 5.188 ± 0.114
1.297ThrHis: 1.297 ± 0.89
0.0ThrIle: 0.0 ± 0.0
0.0ThrLys: 0.0 ± 0.0
3.891ThrLeu: 3.891 ± 2.669
3.891ThrMet: 3.891 ± 2.669
3.891ThrAsn: 3.891 ± 2.669
7.782ThrPro: 7.782 ± 1.665
2.594ThrGln: 2.594 ± 1.779
2.594ThrArg: 2.594 ± 1.779
0.0ThrSer: 0.0 ± 0.0
3.891ThrThr: 3.891 ± 2.669
2.594ThrVal: 2.594 ± 1.779
0.0ThrTrp: 0.0 ± 0.0
3.891ThrTyr: 3.891 ± 0.832
0.0ThrXaa: 0.0 ± 0.0
Val
1.297ValAla: 1.297 ± 0.947
0.0ValCys: 0.0 ± 0.0
3.891ValAsp: 3.891 ± 2.84
5.188ValGlu: 5.188 ± 1.951
3.891ValPhe: 3.891 ± 0.832
10.376ValGly: 10.376 ± 1.608
1.297ValHis: 1.297 ± 0.947
3.891ValIle: 3.891 ± 1.004
3.891ValLys: 3.891 ± 1.004
6.485ValLeu: 6.485 ± 1.061
0.0ValMet: 0.0 ± 0.0
0.0ValAsn: 0.0 ± 0.0
1.297ValPro: 1.297 ± 0.947
3.891ValGln: 3.891 ± 0.832
0.0ValArg: 0.0 ± 0.0
1.297ValSer: 1.297 ± 0.89
2.594ValThr: 2.594 ± 0.057
1.297ValVal: 1.297 ± 0.947
0.0ValTrp: 0.0 ± 0.0
2.594ValTyr: 2.594 ± 0.057
0.0ValXaa: 0.0 ± 0.0
Trp
1.297TrpAla: 1.297 ± 0.89
0.0TrpCys: 0.0 ± 0.0
3.891TrpAsp: 3.891 ± 1.004
1.297TrpGlu: 1.297 ± 0.947
0.0TrpPhe: 0.0 ± 0.0
2.594TrpGly: 2.594 ± 1.894
0.0TrpHis: 0.0 ± 0.0
3.891TrpIle: 3.891 ± 1.004
1.297TrpLys: 1.297 ± 0.89
1.297TrpLeu: 1.297 ± 0.947
0.0TrpMet: 0.0 ± 0.0
1.297TrpAsn: 1.297 ± 0.89
0.0TrpPro: 0.0 ± 0.0
0.0TrpGln: 0.0 ± 0.0
1.297TrpArg: 1.297 ± 0.89
0.0TrpSer: 0.0 ± 0.0
2.594TrpThr: 2.594 ± 0.057
2.594TrpVal: 2.594 ± 1.894
0.0TrpTrp: 0.0 ± 0.0
0.0TrpTyr: 0.0 ± 0.0
0.0TrpXaa: 0.0 ± 0.0
Tyr
2.594TyrAla: 2.594 ± 0.057
1.297TyrCys: 1.297 ± 0.947
0.0TyrAsp: 0.0 ± 0.0
2.594TyrGlu: 2.594 ± 0.057
1.297TyrPhe: 1.297 ± 0.89
2.594TyrGly: 2.594 ± 0.057
1.297TyrHis: 1.297 ± 0.947
0.0TyrIle: 0.0 ± 0.0
2.594TyrLys: 2.594 ± 0.057
2.594TyrLeu: 2.594 ± 0.057
0.0TyrMet: 0.0 ± 0.0
0.0TyrAsn: 0.0 ± 0.0
2.594TyrPro: 2.594 ± 1.779
0.0TyrGln: 0.0 ± 0.0
1.297TyrArg: 1.297 ± 0.89
2.594TyrSer: 2.594 ± 0.057
2.594TyrThr: 2.594 ± 1.779
1.297TyrVal: 1.297 ± 0.947
0.0TyrTrp: 0.0 ± 0.0
1.297TyrTyr: 1.297 ± 0.89
0.0TyrXaa: 0.0 ± 0.0
Xaa
0.0XaaAla: 0.0 ± 0.0
0.0XaaCys: 0.0 ± 0.0
0.0XaaAsp: 0.0 ± 0.0
0.0XaaGlu: 0.0 ± 0.0
0.0XaaPhe: 0.0 ± 0.0
0.0XaaGly: 0.0 ± 0.0
0.0XaaHis: 0.0 ± 0.0
0.0XaaIle: 0.0 ± 0.0
0.0XaaLys: 0.0 ± 0.0
0.0XaaLeu: 0.0 ± 0.0
0.0XaaMet: 0.0 ± 0.0
0.0XaaAsn: 0.0 ± 0.0
0.0XaaPro: 0.0 ± 0.0
0.0XaaGln: 0.0 ± 0.0
0.0XaaArg: 0.0 ± 0.0
0.0XaaSer: 0.0 ± 0.0
0.0XaaThr: 0.0 ± 0.0
0.0XaaVal: 0.0 ± 0.0
0.0XaaTrp: 0.0 ± 0.0
0.0XaaTyr: 0.0 ± 0.0
0.0XaaXaa: 0.0 ± 0.0
Statistics based on 2 proteins (772 amino acids)

Note: The error has been estimated with the bootstraping (x100) at the protein level

Above dipeptide statistics (among other stats for this proteome) you can download from this CSV file
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski