Enterococcus phage EFDG1

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Herelleviridae; Brockvirinae; Schiekvirus; Enterococcus virus EFDG1

Average proteome isoelectric point is 6.03

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 192 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0C5K8N6|A0A0C5K8N6_9CAUD Uncharacterized protein OS=Enterococcus phage EFDG1 OX=1597976 PE=4 SV=1
MM1 pKa = 7.69LSTAEE6 pKa = 3.92YY7 pKa = 10.61DD8 pKa = 3.57SLRR11 pKa = 11.84EE12 pKa = 3.76YY13 pKa = 11.0LVAVIHH19 pKa = 6.15NEE21 pKa = 3.14ISEE24 pKa = 4.35YY25 pKa = 11.25GGDD28 pKa = 3.83TQSLDD33 pKa = 3.08VWKK36 pKa = 10.86EE37 pKa = 3.87EE38 pKa = 3.92VSKK41 pKa = 11.37YY42 pKa = 10.21ADD44 pKa = 3.69NRR46 pKa = 11.84IGWYY50 pKa = 9.12LRR52 pKa = 11.84CMNLADD58 pKa = 4.9LLYY61 pKa = 10.3VDD63 pKa = 5.36TPASLADD70 pKa = 3.15IYY72 pKa = 11.29KK73 pKa = 10.4DD74 pKa = 3.44YY75 pKa = 11.28KK76 pKa = 11.04EE77 pKa = 4.29EE78 pKa = 4.1LNEE81 pKa = 3.72ILRR84 pKa = 11.84DD85 pKa = 3.86YY86 pKa = 11.04TEE88 pKa = 4.06EE89 pKa = 4.39LYY91 pKa = 11.03AGATFDD97 pKa = 4.34KK98 pKa = 10.85EE99 pKa = 3.78ADD101 pKa = 3.7EE102 pKa = 4.36RR103 pKa = 11.84LGWMWEE109 pKa = 4.28DD110 pKa = 3.68YY111 pKa = 11.24DD112 pKa = 4.28PLILEE117 pKa = 4.27AHH119 pKa = 5.65NQGLVARR126 pKa = 11.84LGLLIVAEE134 pKa = 4.07QLATQLEE141 pKa = 4.61QGTFTIPYY149 pKa = 9.94DD150 pKa = 3.51NN151 pKa = 4.39

Molecular weight: 17.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0C5JZD1|A0A0C5JZD1_9CAUD PHB domain-containing protein OS=Enterococcus phage EFDG1 OX=1597976 PE=3 SV=1
MM1 pKa = 7.41RR2 pKa = 11.84NKK4 pKa = 10.49YY5 pKa = 9.66PGYY8 pKa = 10.09CYY10 pKa = 10.19RR11 pKa = 11.84CGTFVEE17 pKa = 4.71KK18 pKa = 10.92GQGHH22 pKa = 5.88FEE24 pKa = 4.19RR25 pKa = 11.84KK26 pKa = 8.35NGYY29 pKa = 8.56WRR31 pKa = 11.84LQHH34 pKa = 6.85ADD36 pKa = 3.29CAIKK40 pKa = 10.81YY41 pKa = 10.09RR42 pKa = 11.84GTNVQGNGTRR52 pKa = 11.84PTKK55 pKa = 9.61EE56 pKa = 3.49RR57 pKa = 11.84KK58 pKa = 9.13

Molecular weight: 6.86 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

192

0

192

43464

41

2199

226.4

25.71

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.136 ± 0.244

0.867 ± 0.093

6.35 ± 0.162

8.096 ± 0.305

3.792 ± 0.104

6.339 ± 0.213

1.622 ± 0.094

6.274 ± 0.143

7.675 ± 0.187

8.133 ± 0.174

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.586 ± 0.078

5.342 ± 0.147

3.221 ± 0.121

3.861 ± 0.149

4.392 ± 0.143

5.927 ± 0.157

6.569 ± 0.213

7.029 ± 0.175

1.114 ± 0.073

4.675 ± 0.143
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski