Catenaria anguillulae PL171

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Blastocladiomycota; Blastocladiomycota incertae sedis; Blastocladiomycetes; Blastocladiales; Catenariaceae; Catenaria; Catenaria anguillulae

Average proteome isoelectric point is 7.26

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 12599 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1Y2HUA0|A0A1Y2HUA0_9FUNG Uncharacterized protein OS=Catenaria anguillulae PL171 OX=765915 GN=BCR44DRAFT_41493 PE=4 SV=1
MM1 pKa = 7.15SAAAAYY7 pKa = 9.95YY8 pKa = 8.25PLPCHH13 pKa = 6.04STDD16 pKa = 3.26ITAQTQAIDD25 pKa = 3.45QSQVANAGDD34 pKa = 3.63NSVIIQIQQAVQAQKK49 pKa = 11.47ADD51 pKa = 3.74VASTAAAGGRR61 pKa = 11.84HH62 pKa = 5.42MSDD65 pKa = 3.51TYY67 pKa = 11.25DD68 pKa = 3.36QQDD71 pKa = 3.42SVAQSQDD78 pKa = 3.08LNQVQFANSGDD89 pKa = 3.6NSVVIQNQNAVQSQFGNLDD108 pKa = 3.27SSDD111 pKa = 3.23GHH113 pKa = 6.38GWATGNSIDD122 pKa = 4.92QAQDD126 pKa = 3.12LNQFQFANASDD137 pKa = 3.55NSINQNAVQNQQANVGGGRR156 pKa = 11.84HH157 pKa = 4.88MHH159 pKa = 7.17DD160 pKa = 4.12ANTVAQAQDD169 pKa = 3.55LNQLQFADD177 pKa = 4.31AGDD180 pKa = 3.66NSAIIQNQDD189 pKa = 2.69APQSQFANIHH199 pKa = 6.3DD200 pKa = 4.37FGGHH204 pKa = 6.39GYY206 pKa = 10.49GHH208 pKa = 6.93TGYY211 pKa = 8.96PDD213 pKa = 3.69SMITQAQDD221 pKa = 3.08LTQLQFANAGDD232 pKa = 3.72NAIIVQNQDD241 pKa = 2.57AFQSQFANLFGGRR254 pKa = 11.84HH255 pKa = 5.0TSDD258 pKa = 3.8ADD260 pKa = 4.38VIAQAQNLDD269 pKa = 3.27QFQFANAGDD278 pKa = 4.03HH279 pKa = 6.85SAVLQNQDD287 pKa = 3.13ALQSQFALTNVDD299 pKa = 3.14PHH301 pKa = 7.8GYY303 pKa = 9.25AASGGAGHH311 pKa = 7.57AGGSDD316 pKa = 2.84WLATFDD322 pKa = 4.42FTHH325 pKa = 6.04QVQDD329 pKa = 3.76LNQVQFASAAGGDD342 pKa = 3.8GGASAMHH349 pKa = 6.87ASVMPDD355 pKa = 2.86VTEE358 pKa = 4.21PLVTMSLFF366 pKa = 3.55

Molecular weight: 38.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1Y2I6M2|A0A1Y2I6M2_9FUNG RRM domain-containing protein OS=Catenaria anguillulae PL171 OX=765915 GN=BCR44DRAFT_122977 PE=4 SV=1
MM1 pKa = 7.48RR2 pKa = 11.84RR3 pKa = 11.84RR4 pKa = 11.84RR5 pKa = 11.84KK6 pKa = 9.74RR7 pKa = 11.84PRR9 pKa = 11.84QQSRR13 pKa = 11.84AMRR16 pKa = 11.84RR17 pKa = 11.84QPKK20 pKa = 10.01LLRR23 pKa = 11.84QPSRR27 pKa = 11.84ATRR30 pKa = 11.84NPPRR34 pKa = 11.84LRR36 pKa = 11.84RR37 pKa = 11.84QPNLVMRR44 pKa = 11.84NQRR47 pKa = 11.84RR48 pKa = 11.84LLRR51 pKa = 11.84QPSRR55 pKa = 11.84AMRR58 pKa = 11.84NQPRR62 pKa = 11.84RR63 pKa = 11.84LHH65 pKa = 5.82QPSQEE70 pKa = 4.25TTSNQPRR77 pKa = 11.84LPHH80 pKa = 5.41QPSRR84 pKa = 11.84VTMQHH89 pKa = 6.06PSKK92 pKa = 10.51RR93 pKa = 11.84PPQPKK98 pKa = 8.78PAKK101 pKa = 6.61TTSPP105 pKa = 3.49

Molecular weight: 12.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

12590

9

12599

4929253

49

5022

391.2

42.53

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

10.969 ± 0.029

1.443 ± 0.011

5.267 ± 0.018

4.509 ± 0.023

3.252 ± 0.015

6.533 ± 0.021

2.959 ± 0.013

3.908 ± 0.016

3.869 ± 0.022

9.305 ± 0.025

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.376 ± 0.01

3.033 ± 0.012

6.816 ± 0.03

4.079 ± 0.017

6.211 ± 0.023

8.717 ± 0.032

6.163 ± 0.016

7.087 ± 0.019

1.352 ± 0.009

2.154 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski