Endogone sp. FLAS-F59071

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Fungi incertae sedis; Mucoromycota; Mucoromycotina; Endogonomycetes; Endogonales; Endogonaceae; Endogone; unclassified Endogone

Average proteome isoelectric point is 6.6

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9431 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A433PLB9|A0A433PLB9_9FUNG Uncharacterized protein OS=Endogone sp. FLAS-F59071 OX=2340872 GN=BC937DRAFT_89004 PE=4 SV=1
MM1 pKa = 7.33YY2 pKa = 10.28CPGMYY7 pKa = 9.97YY8 pKa = 10.33KK9 pKa = 10.68SSPLHH14 pKa = 6.78HH15 pKa = 6.77NLQPDD20 pKa = 3.6VGSASPSGINYY31 pKa = 10.08SAITTDD37 pKa = 3.02LHH39 pKa = 6.52FPAEE43 pKa = 4.33GLVSSIVPGGTVPEE57 pKa = 4.5GTVPEE62 pKa = 4.24DD63 pKa = 3.63TVPEE67 pKa = 4.32GTVPEE72 pKa = 4.3DD73 pKa = 3.6TVPEE77 pKa = 4.13DD78 pKa = 3.81TVPEE82 pKa = 4.19DD83 pKa = 3.64TVPEE87 pKa = 4.16YY88 pKa = 9.92TVPEE92 pKa = 4.16DD93 pKa = 3.58TVPEE97 pKa = 4.15VLEE100 pKa = 4.29GTVPEE105 pKa = 4.41VPEE108 pKa = 4.07DD109 pKa = 3.87TVPEE113 pKa = 4.1DD114 pKa = 3.92TVPVDD119 pKa = 4.23ALAADD124 pKa = 3.83TALACSTAPADD135 pKa = 3.85TDD137 pKa = 3.9PAADD141 pKa = 3.8SAPADD146 pKa = 3.79TAPVGDD152 pKa = 4.11TAWANPATGMPRR164 pKa = 11.84KK165 pKa = 10.16VKK167 pKa = 10.04VRR169 pKa = 11.84CSQSARR175 pKa = 11.84GGCWRR180 pKa = 11.84QAA182 pKa = 3.07

Molecular weight: 18.83 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A433PTP4|A0A433PTP4_9FUNG Uncharacterized protein OS=Endogone sp. FLAS-F59071 OX=2340872 GN=BC937DRAFT_94075 PE=4 SV=1
MM1 pKa = 7.43KK2 pKa = 10.41LVRR5 pKa = 11.84LTKK8 pKa = 10.66LLVRR12 pKa = 11.84STKK15 pKa = 10.75LLVKK19 pKa = 10.81SMMKK23 pKa = 10.49LVRR26 pKa = 11.84LMTKK30 pKa = 10.53LLVKK34 pKa = 10.86SMTKK38 pKa = 10.49LVRR41 pKa = 11.84STTLVRR47 pKa = 11.84LTKK50 pKa = 10.56LLLVRR55 pKa = 11.84STKK58 pKa = 10.74LLVRR62 pKa = 11.84STTTKK67 pKa = 10.43LVRR70 pKa = 11.84SMKK73 pKa = 10.14LVRR76 pKa = 11.84STKK79 pKa = 10.31LLVRR83 pKa = 11.84STTKK87 pKa = 10.79LLVRR91 pKa = 11.84STTKK95 pKa = 10.52LVRR98 pKa = 11.84STKK101 pKa = 10.04LVRR104 pKa = 11.84STKK107 pKa = 10.42LLVRR111 pKa = 11.84STTKK115 pKa = 10.75LVTTKK120 pKa = 10.54LVRR123 pKa = 11.84STTTKK128 pKa = 10.51LVRR131 pKa = 11.84STKK134 pKa = 10.04LVRR137 pKa = 11.84STKK140 pKa = 10.44LLVRR144 pKa = 11.84SMTKK148 pKa = 10.48LLVRR152 pKa = 11.84SMATKK157 pKa = 10.64LVRR160 pKa = 11.84STKK163 pKa = 10.29LLVRR167 pKa = 11.84STMTKK172 pKa = 10.28LVRR175 pKa = 11.84STKK178 pKa = 10.42LLVRR182 pKa = 11.84STTKK186 pKa = 10.79LLVRR190 pKa = 11.84STTTKK195 pKa = 10.51LVRR198 pKa = 11.84STKK201 pKa = 10.01LVRR204 pKa = 11.84SMKK207 pKa = 10.09LVRR210 pKa = 11.84SMTKK214 pKa = 10.3LLVRR218 pKa = 11.84STATKK223 pKa = 10.38LVRR226 pKa = 11.84STKK229 pKa = 10.04LVRR232 pKa = 11.84STKK235 pKa = 10.42LLVRR239 pKa = 11.84STTKK243 pKa = 10.83LVTTKK248 pKa = 10.85LLVRR252 pKa = 11.84STTTKK257 pKa = 10.81LMRR260 pKa = 11.84STKK263 pKa = 9.97LVRR266 pKa = 11.84STKK269 pKa = 10.58LLVRR273 pKa = 11.84STKK276 pKa = 10.55LVTTKK281 pKa = 10.83LVTTKK286 pKa = 10.63LVRR289 pKa = 11.84STKK292 pKa = 10.46LLLRR296 pKa = 11.84STTTKK301 pKa = 10.55LVRR304 pKa = 11.84STKK307 pKa = 10.07LVRR310 pKa = 11.84LTKK313 pKa = 10.56LLVRR317 pKa = 11.84SRR319 pKa = 11.84LEE321 pKa = 4.23FTCHH325 pKa = 5.89

Molecular weight: 37.07 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9193

238

9431

3895637

8

5502

413.1

46.02

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.835 ± 0.024

1.326 ± 0.011

5.576 ± 0.021

6.456 ± 0.032

3.894 ± 0.017

6.117 ± 0.023

2.459 ± 0.011

5.257 ± 0.018

5.087 ± 0.023

9.139 ± 0.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.213 ± 0.011

4.017 ± 0.016

5.785 ± 0.029

3.945 ± 0.023

6.01 ± 0.021

8.067 ± 0.03

6.211 ± 0.021

6.498 ± 0.02

1.235 ± 0.008

2.873 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski