Torque teno sus virus 1a

Taxonomy: Viruses; Anelloviridae; Iotatorquevirus

Average proteome isoelectric point is 6.54

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|F8TX29|F8TX29_9VIRU ORF2 OS=Torque teno sus virus 1a OX=687386 GN=ORF2 PE=4 SV=1
MM1 pKa = 7.08FLYY4 pKa = 9.97WEE6 pKa = 4.53EE7 pKa = 3.91AWLTAIEE14 pKa = 5.38GYY16 pKa = 10.76HH17 pKa = 6.65NLDD20 pKa = 3.54CRR22 pKa = 11.84CGNWYY27 pKa = 10.07DD28 pKa = 3.46HH29 pKa = 6.1LQRR32 pKa = 11.84LCALDD37 pKa = 3.6QLDD40 pKa = 4.17AVAAAAIEE48 pKa = 4.35RR49 pKa = 11.84EE50 pKa = 4.44DD51 pKa = 4.2GDD53 pKa = 4.0GDD55 pKa = 4.16AATTDD60 pKa = 4.16TITDD64 pKa = 3.84GDD66 pKa = 4.08PGVAGGG72 pKa = 4.02

Molecular weight: 7.85 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|F8TX29|F8TX29_9VIRU ORF2 OS=Torque teno sus virus 1a OX=687386 GN=ORF2 PE=4 SV=1
MM1 pKa = 8.06RR2 pKa = 11.84FRR4 pKa = 11.84PIRR7 pKa = 11.84RR8 pKa = 11.84RR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84YY14 pKa = 9.34RR15 pKa = 11.84KK16 pKa = 9.55RR17 pKa = 11.84RR18 pKa = 11.84WGWRR22 pKa = 11.84RR23 pKa = 11.84RR24 pKa = 11.84YY25 pKa = 9.16YY26 pKa = 8.7RR27 pKa = 11.84HH28 pKa = 6.54HH29 pKa = 5.95YY30 pKa = 9.16RR31 pKa = 11.84RR32 pKa = 11.84RR33 pKa = 11.84PWRR36 pKa = 11.84RR37 pKa = 11.84WRR39 pKa = 11.84VRR41 pKa = 11.84RR42 pKa = 11.84WRR44 pKa = 11.84RR45 pKa = 11.84SVFRR49 pKa = 11.84RR50 pKa = 11.84GGRR53 pKa = 11.84RR54 pKa = 11.84ARR56 pKa = 11.84PYY58 pKa = 10.18RR59 pKa = 11.84ISAFNPRR66 pKa = 11.84VMRR69 pKa = 11.84RR70 pKa = 11.84IVIQGWWPLIQCLPGQEE87 pKa = 4.09HH88 pKa = 6.75LRR90 pKa = 11.84YY91 pKa = 9.65RR92 pKa = 11.84PLNWDD97 pKa = 3.3IEE99 pKa = 4.48KK100 pKa = 10.44EE101 pKa = 4.22WVVEE105 pKa = 3.97KK106 pKa = 10.95DD107 pKa = 3.44KK108 pKa = 11.52EE109 pKa = 4.14PDD111 pKa = 2.97KK112 pKa = 10.85MGYY115 pKa = 9.11LVQYY119 pKa = 10.1GGGWGSGHH127 pKa = 6.31ITLEE131 pKa = 4.07DD132 pKa = 4.17LFNEE136 pKa = 4.14HH137 pKa = 5.92QKK139 pKa = 8.42WRR141 pKa = 11.84NMWSKK146 pKa = 11.53SNDD149 pKa = 2.85GMDD152 pKa = 3.68LVRR155 pKa = 11.84YY156 pKa = 7.33FGCKK160 pKa = 8.81IYY162 pKa = 10.43LYY164 pKa = 9.82PLEE167 pKa = 5.55DD168 pKa = 2.88VDD170 pKa = 4.93YY171 pKa = 9.82WFWWDD176 pKa = 3.06TDD178 pKa = 3.77FKK180 pKa = 11.64NNYY183 pKa = 6.99EE184 pKa = 4.07DD185 pKa = 5.33RR186 pKa = 11.84IKK188 pKa = 10.44EE189 pKa = 3.98YY190 pKa = 10.45CQPSVMLMAKK200 pKa = 8.32RR201 pKa = 11.84TKK203 pKa = 10.03IVVARR208 pKa = 11.84KK209 pKa = 8.72RR210 pKa = 11.84AQHH213 pKa = 5.56RR214 pKa = 11.84RR215 pKa = 11.84RR216 pKa = 11.84VKK218 pKa = 10.46KK219 pKa = 10.42IFIPPPSRR227 pKa = 11.84DD228 pKa = 3.04TTQWKK233 pKa = 9.0FQTEE237 pKa = 4.5FCKK240 pKa = 10.7QPLFTWAAGLIEE252 pKa = 4.38LQRR255 pKa = 11.84PFDD258 pKa = 4.05FNGGFRR264 pKa = 11.84NAWWLEE270 pKa = 3.49PRR272 pKa = 11.84NEE274 pKa = 4.27AGEE277 pKa = 4.1MDD279 pKa = 5.56YY280 pKa = 9.86ITLWGRR286 pKa = 11.84VPPQGDD292 pKa = 3.19TDD294 pKa = 3.81MPDD297 pKa = 3.28PNTFKK302 pKa = 8.72TTTQNKK308 pKa = 9.47NYY310 pKa = 9.93SIQPGKK316 pKa = 10.05EE317 pKa = 3.79NNVYY321 pKa = 10.44PIMAYY326 pKa = 9.16IRR328 pKa = 11.84QEE330 pKa = 3.79NQQPVVNWCVCYY342 pKa = 10.89NKK344 pKa = 10.42TIDD347 pKa = 3.15RR348 pKa = 11.84WRR350 pKa = 11.84KK351 pKa = 6.27TQAATLKK358 pKa = 10.18IGNLRR363 pKa = 11.84GLCVRR368 pKa = 11.84EE369 pKa = 4.55LSRR372 pKa = 11.84QEE374 pKa = 3.59MTYY377 pKa = 10.05KK378 pKa = 10.02WKK380 pKa = 10.57QGEE383 pKa = 4.03FSKK386 pKa = 10.55AYY388 pKa = 9.41HH389 pKa = 6.63DD390 pKa = 3.18RR391 pKa = 11.84WGYY394 pKa = 7.7NTYY397 pKa = 10.33FVTIDD402 pKa = 3.37GRR404 pKa = 11.84KK405 pKa = 7.74GTEE408 pKa = 3.89NPTVQIWNFNDD419 pKa = 3.9KK420 pKa = 9.38ITVQSGHH427 pKa = 6.48ILNFAFNIQKK437 pKa = 10.88SNDD440 pKa = 3.41NLKK443 pKa = 11.03DD444 pKa = 3.35SDD446 pKa = 3.89FGKK449 pKa = 10.42IGLPKK454 pKa = 10.24SPHH457 pKa = 6.57DD458 pKa = 4.62LDD460 pKa = 5.33FGHH463 pKa = 7.24KK464 pKa = 9.92NRR466 pKa = 11.84FGPFVVKK473 pKa = 10.77NEE475 pKa = 3.89PVEE478 pKa = 4.23FQLNPPRR485 pKa = 11.84AINVWVRR492 pKa = 11.84YY493 pKa = 10.0KK494 pKa = 10.85FFFQFGGEE502 pKa = 4.11YY503 pKa = 10.14QPPTGIRR510 pKa = 11.84DD511 pKa = 3.64PCLDD515 pKa = 3.5NPAYY519 pKa = 9.14PVPQSTGVTHH529 pKa = 7.11PLFAGAGGITAQVGPSGLTARR550 pKa = 11.84TIRR553 pKa = 11.84ALCASPPKK561 pKa = 10.62AQTSQCAFLGGDD573 pKa = 3.03RR574 pKa = 11.84SEE576 pKa = 4.09EE577 pKa = 4.14EE578 pKa = 3.98KK579 pKa = 10.83RR580 pKa = 11.84KK581 pKa = 8.29EE582 pKa = 4.12TQEE585 pKa = 4.05TSSEE589 pKa = 4.11SSITSAEE596 pKa = 4.07SSTEE600 pKa = 3.94GDD602 pKa = 3.09GSTDD606 pKa = 3.12EE607 pKa = 4.12EE608 pKa = 4.11EE609 pKa = 3.9RR610 pKa = 11.84RR611 pKa = 11.84EE612 pKa = 3.76RR613 pKa = 11.84RR614 pKa = 11.84RR615 pKa = 11.84RR616 pKa = 11.84RR617 pKa = 11.84RR618 pKa = 11.84KK619 pKa = 8.84RR620 pKa = 11.84QLKK623 pKa = 10.15LFYY626 pKa = 10.37QRR628 pKa = 11.84LTDD631 pKa = 4.24RR632 pKa = 11.84YY633 pKa = 9.55LEE635 pKa = 4.11HH636 pKa = 6.71KK637 pKa = 10.16RR638 pKa = 11.84RR639 pKa = 11.84RR640 pKa = 11.84LSEE643 pKa = 3.83

Molecular weight: 77.11 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

715

72

643

357.5

42.48

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.035 ± 4.19

1.818 ± 0.961

5.874 ± 3.279

6.014 ± 0.381

4.615 ± 1.32

7.273 ± 1.57

1.958 ± 0.335

4.615 ± 0.184

5.734 ± 2.346

5.874 ± 1.574

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.678 ± 0.118

4.755 ± 0.809

5.734 ± 1.778

4.895 ± 0.866

11.748 ± 3.102

3.916 ± 1.602

5.594 ± 0.552

4.476 ± 0.695

4.056 ± 0.045

4.336 ± 0.069
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski