Cynomolgus macaque cytomegalovirus strain Mauritius

Taxonomy: Viruses; Duplodnaviria; Heunggongvirae; Peploviricota; Herviviricetes; Herpesvirales; Herpesviridae; Betaherpesvirinae; Cytomegalovirus; Macacine betaherpesvirus 3

Average proteome isoelectric point is 7.53

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 290 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0K1H0C2|A0A0K1H0C2_9BETA Uncharacterized protein OS=Cynomolgus macaque cytomegalovirus strain Mauritius OX=1690255 GN=Cy20 PE=4 SV=1
MM1 pKa = 7.5RR2 pKa = 11.84WVAMRR7 pKa = 11.84WLLLIVATSAKK18 pKa = 10.29ASSTTAGNTSTPTASTITSTVTTASTTNMSTPSPASSPATTNTTTSSPSTKK69 pKa = 10.33SSTSSTNTTITTTGTASATTPKK91 pKa = 10.4SSTSVTSSPANSTSTSTKK109 pKa = 9.78PSTTNTSSPITTSSPASNTSTTTSSTSTVNGTNSTTEE146 pKa = 4.13TNTTSLPDD154 pKa = 3.27TTADD158 pKa = 3.45MNVTTTEE165 pKa = 4.5PYY167 pKa = 10.96NSTGYY172 pKa = 11.03EE173 pKa = 3.7NVTINITTPSPYY185 pKa = 10.0EE186 pKa = 3.61ALQIVDD192 pKa = 4.79LCNEE196 pKa = 4.43TISIVFKK203 pKa = 11.14DD204 pKa = 3.61PGEE207 pKa = 4.06EE208 pKa = 4.2DD209 pKa = 3.46EE210 pKa = 5.09SSEE213 pKa = 3.95TTEE216 pKa = 4.2YY217 pKa = 11.17SDD219 pKa = 4.21EE220 pKa = 4.3EE221 pKa = 4.3PVASSNEE228 pKa = 3.83DD229 pKa = 3.2DD230 pKa = 3.48STYY233 pKa = 10.3FPQSPGYY240 pKa = 7.88TLTYY244 pKa = 9.43DD245 pKa = 3.78TEE247 pKa = 4.17DD248 pKa = 3.27TIYY251 pKa = 10.65FQATCDD257 pKa = 4.08RR258 pKa = 11.84NDD260 pKa = 3.33TYY262 pKa = 11.56NITSCDD268 pKa = 3.68YY269 pKa = 10.21TNKK272 pKa = 10.2SVNSWSTVTSVSFFPPTLTPCHH294 pKa = 6.56KK295 pKa = 9.56PVAIIKK301 pKa = 9.88IGNDD305 pKa = 3.25SLVVSASATSNLVDD319 pKa = 5.76AIYY322 pKa = 10.99KK323 pKa = 10.49LLGLPDD329 pKa = 3.78VNSDD333 pKa = 4.72FINQLGRR340 pKa = 11.84YY341 pKa = 8.7HH342 pKa = 7.95PITLQGQIEE351 pKa = 4.19YY352 pKa = 9.97RR353 pKa = 11.84DD354 pKa = 3.61WYY356 pKa = 7.62TTEE359 pKa = 3.67

Molecular weight: 38.05 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0K1H019|A0A0K1H019_9BETA Uncharacterized protein OS=Cynomolgus macaque cytomegalovirus strain Mauritius OX=1690255 GN=Cy83 PE=4 SV=1
MM1 pKa = 6.66VQIHH5 pKa = 6.22EE6 pKa = 4.41SCGTVRR12 pKa = 11.84GPGRR16 pKa = 11.84SRR18 pKa = 11.84ALHH21 pKa = 6.12RR22 pKa = 11.84SVALLPLSDD31 pKa = 4.37ASGDD35 pKa = 3.15RR36 pKa = 11.84HH37 pKa = 5.49GRR39 pKa = 11.84CRR41 pKa = 11.84QDD43 pKa = 2.96VQYY46 pKa = 11.06SGAGCEE52 pKa = 4.09PKK54 pKa = 10.18LRR56 pKa = 11.84HH57 pKa = 5.84YY58 pKa = 10.43RR59 pKa = 11.84DD60 pKa = 3.09HH61 pKa = 7.32RR62 pKa = 11.84NRR64 pKa = 11.84RR65 pKa = 11.84PEE67 pKa = 3.99PQRR70 pKa = 11.84DD71 pKa = 4.05SQPHH75 pKa = 5.74ALGAGEE81 pKa = 5.38DD82 pKa = 3.84DD83 pKa = 5.75LSRR86 pKa = 11.84LWFQQQTCASGRR98 pKa = 11.84GRR100 pKa = 11.84QRR102 pKa = 11.84YY103 pKa = 9.11SEE105 pKa = 4.53AVPDD109 pKa = 3.59LRR111 pKa = 11.84VARR114 pKa = 11.84RR115 pKa = 11.84KK116 pKa = 9.4HH117 pKa = 5.72HH118 pKa = 5.79STSASEE124 pKa = 4.1RR125 pKa = 11.84SLDD128 pKa = 3.5LLAGHH133 pKa = 6.74RR134 pKa = 11.84RR135 pKa = 11.84HH136 pKa = 6.0YY137 pKa = 11.1GKK139 pKa = 9.87ILKK142 pKa = 10.05YY143 pKa = 10.43VGTKK147 pKa = 10.17GVSS150 pKa = 2.92

Molecular weight: 16.91 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

290

0

290

72865

29

2179

251.3

28.39

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.763 ± 0.146

2.743 ± 0.104

4.451 ± 0.123

4.857 ± 0.135

4.116 ± 0.101

4.916 ± 0.158

3.318 ± 0.114

5.096 ± 0.139

3.663 ± 0.131

9.901 ± 0.171

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.665 ± 0.078

3.996 ± 0.113

5.754 ± 0.169

3.94 ± 0.134

6.903 ± 0.198

7.954 ± 0.154

6.986 ± 0.236

7.08 ± 0.148

1.433 ± 0.082

3.464 ± 0.098
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski