Proteus penneri ATCC 35198

Taxonomy: cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Morganellaceae; Proteus; Proteus penneri

Average proteome isoelectric point is 6.67

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4909 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|C0AY89|C0AY89_9GAMM Transporter DASS family OS=Proteus penneri ATCC 35198 OX=471881 GN=PROPEN_02812 PE=4 SV=1
MM1 pKa = 8.32DD2 pKa = 6.26PLTPQLMDD10 pKa = 3.15ICAIQEE16 pKa = 4.18TYY18 pKa = 10.3GQNKK22 pKa = 7.12ATRR25 pKa = 11.84IGNTIYY31 pKa = 10.89GFNSNTKK38 pKa = 9.56KK39 pKa = 10.56DD40 pKa = 3.87YY41 pKa = 11.12YY42 pKa = 10.52SLKK45 pKa = 9.45TSEE48 pKa = 4.65DD49 pKa = 3.8KK50 pKa = 10.82IVACIWDD57 pKa = 3.55TGGIDD62 pKa = 3.33TLDD65 pKa = 3.51FSKK68 pKa = 10.3YY69 pKa = 9.15TVDD72 pKa = 4.73QKK74 pKa = 11.25IDD76 pKa = 3.71LNEE79 pKa = 4.14GSFSDD84 pKa = 4.56VGGLRR89 pKa = 11.84ANISIAYY96 pKa = 9.3DD97 pKa = 3.47AVIEE101 pKa = 4.0NAIGGSQTDD110 pKa = 3.98IISGNDD116 pKa = 3.0ANNRR120 pKa = 11.84LFGKK124 pKa = 10.34LGEE127 pKa = 4.26DD128 pKa = 3.12TLYY131 pKa = 11.29GKK133 pKa = 10.49GGNDD137 pKa = 2.88ILYY140 pKa = 10.0GGQGNDD146 pKa = 2.96HH147 pKa = 7.07LYY149 pKa = 10.95GEE151 pKa = 4.82KK152 pKa = 11.02GNDD155 pKa = 3.39YY156 pKa = 10.97LYY158 pKa = 11.15GEE160 pKa = 4.37QDD162 pKa = 2.98NDD164 pKa = 3.65VLVDD168 pKa = 3.69SDD170 pKa = 5.23GNDD173 pKa = 3.27HH174 pKa = 7.24LYY176 pKa = 10.93GGQGDD181 pKa = 4.34DD182 pKa = 4.18YY183 pKa = 11.23LWDD186 pKa = 3.85SEE188 pKa = 4.52GDD190 pKa = 3.69NILDD194 pKa = 4.02GGLGDD199 pKa = 5.06DD200 pKa = 4.34VLFGGDD206 pKa = 5.25GDD208 pKa = 5.07DD209 pKa = 4.03EE210 pKa = 5.36LNGGEE215 pKa = 4.76GNDD218 pKa = 3.91HH219 pKa = 7.47LDD221 pKa = 3.48PGMGNNTLKK230 pKa = 11.02GGTGYY235 pKa = 8.59DD236 pKa = 3.03TFSFNTQDD244 pKa = 3.51NDD246 pKa = 3.2SSNIITDD253 pKa = 4.3FEE255 pKa = 4.64SGIDD259 pKa = 3.43KK260 pKa = 11.02LFFLL264 pKa = 5.49

Molecular weight: 28.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|C0ASR5|C0ASR5_9GAMM Glutamine--fructose-6-phosphate transaminase (Isomerizing) OS=Proteus penneri ATCC 35198 OX=471881 GN=PROPEN_00846 PE=4 SV=1
MM1 pKa = 7.45KK2 pKa = 9.51RR3 pKa = 11.84TFQPSVLKK11 pKa = 10.65RR12 pKa = 11.84NRR14 pKa = 11.84NHH16 pKa = 6.8GFRR19 pKa = 11.84ARR21 pKa = 11.84MATKK25 pKa = 10.4NGRR28 pKa = 11.84QVLARR33 pKa = 11.84RR34 pKa = 11.84RR35 pKa = 11.84AKK37 pKa = 10.22GRR39 pKa = 11.84ARR41 pKa = 11.84LTVSSKK47 pKa = 11.16

Molecular weight: 5.49 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4909

0

4909

1040949

24

1676

212.0

23.7

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.978 ± 0.038

1.106 ± 0.015

5.107 ± 0.029

5.958 ± 0.038

4.165 ± 0.032

6.684 ± 0.038

2.148 ± 0.019

7.313 ± 0.035

5.689 ± 0.037

10.427 ± 0.04

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.766 ± 0.02

4.762 ± 0.033

3.996 ± 0.024

4.442 ± 0.037

4.657 ± 0.033

6.425 ± 0.031

5.451 ± 0.025

6.393 ± 0.031

1.279 ± 0.015

3.255 ± 0.028
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski