Tessaracoccus oleiagri

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Propionibacteriales; Propionibacteriaceae; Tessaracoccus

Average proteome isoelectric point is 5.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2895 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1G9M0T7|A0A1G9M0T7_9ACTN 8-oxo-dGTP pyrophosphatase MutT NUDIX family OS=Tessaracoccus oleiagri OX=686624 GN=SAMN04488242_2447 PE=3 SV=1
MM1 pKa = 7.06NQPAVLVAALLTLTLSACSDD21 pKa = 3.87ANDD24 pKa = 3.52SSGIGAEE31 pKa = 4.07PASRR35 pKa = 11.84AASCEE40 pKa = 3.97YY41 pKa = 10.32PEE43 pKa = 5.78DD44 pKa = 4.15GQPVKK49 pKa = 10.44PVDD52 pKa = 4.21PPPSTDD58 pKa = 3.08VANKK62 pKa = 8.15GTTTATLQLTAGDD75 pKa = 3.88IEE77 pKa = 4.22ITLDD81 pKa = 3.89RR82 pKa = 11.84EE83 pKa = 4.2KK84 pKa = 11.11APCAVNSFLSLAQQGYY100 pKa = 10.5FDD102 pKa = 4.07GTDD105 pKa = 3.24CHH107 pKa = 7.06RR108 pKa = 11.84LTDD111 pKa = 3.69YY112 pKa = 11.53GIFILQCGDD121 pKa = 3.4PSATGRR127 pKa = 11.84GGPGYY132 pKa = 10.82VFADD136 pKa = 3.94EE137 pKa = 4.76VSDD140 pKa = 3.88DD141 pKa = 4.08LEE143 pKa = 4.52YY144 pKa = 10.88TSGTVAMANRR154 pKa = 11.84GPDD157 pKa = 3.39TNGSQFFLVWDD168 pKa = 4.9DD169 pKa = 4.06SQLDD173 pKa = 3.39PAYY176 pKa = 9.56TVFGQMDD183 pKa = 3.99EE184 pKa = 4.62AGLDD188 pKa = 3.62VVRR191 pKa = 11.84GIAAQGVDD199 pKa = 3.91AGDD202 pKa = 3.71GTSPIAEE209 pKa = 3.86ARR211 pKa = 11.84IEE213 pKa = 4.17GVTVGG218 pKa = 4.11

Molecular weight: 22.53 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1G9I2E2|A0A1G9I2E2_9ACTN DNA ligase (ATP) OS=Tessaracoccus oleiagri OX=686624 GN=SAMN04488242_0685 PE=4 SV=1
MM1 pKa = 7.69SKK3 pKa = 9.01RR4 pKa = 11.84TFQPSNRR11 pKa = 11.84RR12 pKa = 11.84RR13 pKa = 11.84SRR15 pKa = 11.84THH17 pKa = 6.17GFRR20 pKa = 11.84SRR22 pKa = 11.84MRR24 pKa = 11.84TRR26 pKa = 11.84AGRR29 pKa = 11.84AILAARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84KK38 pKa = 10.21GRR40 pKa = 11.84VEE42 pKa = 4.17LSAA45 pKa = 5.19

Molecular weight: 5.33 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2895

0

2895

980936

37

2065

338.8

36.63

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.263 ± 0.066

0.613 ± 0.012

6.216 ± 0.038

6.28 ± 0.042

3.183 ± 0.03

8.892 ± 0.036

2.164 ± 0.021

4.211 ± 0.034

2.24 ± 0.033

10.291 ± 0.045

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.094 ± 0.019

2.083 ± 0.024

5.407 ± 0.034

2.946 ± 0.022

7.378 ± 0.054

5.289 ± 0.031

5.783 ± 0.035

8.965 ± 0.039

1.592 ± 0.02

2.11 ± 0.022
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski