Corynebacterium aquilae DSM 44791

Taxonomy: cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinomycetia; Corynebacteriales; Corynebacteriaceae; Corynebacterium; Corynebacterium aquilae

Average proteome isoelectric point is 5.97

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2002 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1L7CE29|A0A1L7CE29_9CORY ABC transporter substrate-binding protein OS=Corynebacterium aquilae DSM 44791 OX=1431546 GN=CAQU_02480 PE=4 SV=1
MM1 pKa = 7.21NAEE4 pKa = 3.89KK5 pKa = 9.91TLPRR9 pKa = 11.84VIRR12 pKa = 11.84RR13 pKa = 11.84ALAVGACTAPIVLVGCSNGGQSGPSTTVVTVTRR46 pKa = 11.84SSQSSTPSTSAAAPNSSAVAEE67 pKa = 4.39PKK69 pKa = 10.3KK70 pKa = 10.06DD71 pKa = 3.28THH73 pKa = 6.01SQNGGTDD80 pKa = 3.09GNTFVPEE87 pKa = 4.17HH88 pKa = 6.01FPVRR92 pKa = 11.84NDD94 pKa = 4.12LIEE97 pKa = 4.74GPPEE101 pKa = 3.97LQGKK105 pKa = 7.15TIVSCLGAEE114 pKa = 4.63HH115 pKa = 7.41PGQYY119 pKa = 10.71DD120 pKa = 3.21PGLTLLDD127 pKa = 4.42DD128 pKa = 4.37GTRR131 pKa = 11.84VWTAQCQMAYY141 pKa = 10.48DD142 pKa = 3.89YY143 pKa = 11.5GRR145 pKa = 11.84ADD147 pKa = 3.05IAGTDD152 pKa = 4.34DD153 pKa = 3.68YY154 pKa = 11.85SEE156 pKa = 4.64SDD158 pKa = 2.9SDD160 pKa = 5.0YY161 pKa = 11.41SDD163 pKa = 4.03TYY165 pKa = 11.85DD166 pKa = 4.29DD167 pKa = 5.41GYY169 pKa = 11.51SDD171 pKa = 5.01GYY173 pKa = 10.73DD174 pKa = 3.21AAVEE178 pKa = 4.28EE179 pKa = 4.57YY180 pKa = 10.92EE181 pKa = 4.51EE182 pKa = 4.32ALEE185 pKa = 4.57DD186 pKa = 3.97ALSEE190 pKa = 4.98LEE192 pKa = 4.52DD193 pKa = 3.56NN194 pKa = 4.67

Molecular weight: 20.48 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1L7CD50|A0A1L7CD50_9CORY Uncharacterized protein OS=Corynebacterium aquilae DSM 44791 OX=1431546 GN=CAQU_00335 PE=3 SV=1
MM1 pKa = 7.28GVVIYY6 pKa = 10.52GSFGQLWWEE15 pKa = 3.59KK16 pKa = 9.66RR17 pKa = 11.84VRR19 pKa = 11.84VFVWRR24 pKa = 11.84CAPVFYY30 pKa = 11.04ALFTLVKK37 pKa = 10.24IPVTSGWKK45 pKa = 9.78SMANIFLAQPCAWRR59 pKa = 11.84VVSLQVLGCGKK70 pKa = 8.36TSYY73 pKa = 10.68RR74 pKa = 11.84KK75 pKa = 8.56GVVMAGHH82 pKa = 7.16RR83 pKa = 11.84EE84 pKa = 3.88PVSWRR89 pKa = 11.84EE90 pKa = 3.74QLRR93 pKa = 11.84ASLKK97 pKa = 8.93QTADD101 pKa = 3.27PDD103 pKa = 3.33ATIRR107 pKa = 11.84FGVGMGVLFFVLNSFRR123 pKa = 11.84DD124 pKa = 3.78EE125 pKa = 4.2VGLVLNLGLSLSLVAVFGIYY145 pKa = 10.45GLAARR150 pKa = 11.84NPGGRR155 pKa = 11.84PRR157 pKa = 11.84YY158 pKa = 9.15VRR160 pKa = 11.84GVVAAAVLIGVLAAALALVGQFFF183 pKa = 3.95

Molecular weight: 20.01 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2002

0

2002

655671

40

4411

327.5

35.36

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

12.056 ± 0.076

0.868 ± 0.017

6.186 ± 0.047

5.839 ± 0.053

3.297 ± 0.032

8.265 ± 0.049

2.335 ± 0.036

5.106 ± 0.041

3.457 ± 0.052

9.28 ± 0.068

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.255 ± 0.024

2.964 ± 0.042

5.229 ± 0.045

3.452 ± 0.031

5.776 ± 0.061

5.436 ± 0.035

6.473 ± 0.068

8.229 ± 0.058

1.279 ± 0.02

2.219 ± 0.027
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski