Suillus luteus UH-Slu-Lm8-n1

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Boletales; Suillineae; Suillaceae; Suillus; Suillus luteus

Average proteome isoelectric point is 6.84

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 18277 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0D0AIW7|A0A0D0AIW7_9AGAM Unplaced genomic scaffold CY34scaffold_1408 whole genome shotgun sequence OS=Suillus luteus UH-Slu-Lm8-n1 OX=930992 GN=CY34DRAFT_814464 PE=4 SV=1
LL1 pKa = 7.35EE2 pKa = 4.16GHH4 pKa = 6.28TDD6 pKa = 3.2SVYY9 pKa = 11.4SLTLFQNDD17 pKa = 3.39RR18 pKa = 11.84LLASTSVDD26 pKa = 3.11DD27 pKa = 5.01TARR30 pKa = 11.84LWDD33 pKa = 4.64LDD35 pKa = 3.77TNLQVGPPLQHH46 pKa = 6.22EE47 pKa = 4.64NEE49 pKa = 4.34VEE51 pKa = 4.12CAAFSTDD58 pKa = 3.4GKK60 pKa = 10.78LLSTACDD67 pKa = 3.73DD68 pKa = 3.71NNAYY72 pKa = 9.87VWDD75 pKa = 4.36IYY77 pKa = 11.72

Molecular weight: 8.59 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0D0ABS6|A0A0D0ABS6_9AGAM Unplaced genomic scaffold CY34scaffold_221 whole genome shotgun sequence OS=Suillus luteus UH-Slu-Lm8-n1 OX=930992 GN=CY34DRAFT_89578 PE=4 SV=1
MM1 pKa = 7.33GAFAFFGPGKK11 pKa = 10.14FGNLHH16 pKa = 6.14TSLSNPVAGRR26 pKa = 11.84GSIRR30 pKa = 11.84QRR32 pKa = 11.84MASRR36 pKa = 11.84PRR38 pKa = 11.84NARR41 pKa = 11.84IPRR44 pKa = 11.84FPILLRR50 pKa = 11.84KK51 pKa = 9.14VLHH54 pKa = 6.5KK55 pKa = 10.68LGSQPRR61 pKa = 11.84VGG63 pKa = 3.72

Molecular weight: 6.93 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

18271

6

18277

5969091

49

5054

326.6

36.28

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.102 ± 0.02

1.545 ± 0.008

5.6 ± 0.016

5.538 ± 0.019

3.827 ± 0.012

6.047 ± 0.017

2.873 ± 0.011

5.201 ± 0.015

4.413 ± 0.016

9.409 ± 0.023

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.225 ± 0.008

3.49 ± 0.01

6.15 ± 0.022

3.829 ± 0.014

6.214 ± 0.015

8.934 ± 0.026

6.087 ± 0.014

6.336 ± 0.014

1.522 ± 0.008

2.656 ± 0.011
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski