Camel associated porprismacovirus 4

Taxonomy: Viruses; Monodnaviria; Shotokuvirae; Cressdnaviricota; Arfiviricetes; Cremevirales; Smacoviridae; Porprismacovirus

Average proteome isoelectric point is 6.49

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 2 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A0A1EKX0|A0A0A1EKX0_9VIRU Putative replicase protein OS=Camel associated porprismacovirus 4 OX=2170108 GN=rep PE=4 SV=1
MM1 pKa = 7.31ATQTVHH7 pKa = 5.84ATYY10 pKa = 10.67QEE12 pKa = 4.36IYY14 pKa = 10.55DD15 pKa = 4.48LSTKK19 pKa = 10.35PGTLSVIGVHH29 pKa = 5.71TPTGRR34 pKa = 11.84KK35 pKa = 8.95PYY37 pKa = 11.35DD38 pKa = 3.17MLQGFFRR45 pKa = 11.84QFKK48 pKa = 8.4KK49 pKa = 10.75YY50 pKa = 9.66KK51 pKa = 9.06YY52 pKa = 9.92NGITRR57 pKa = 11.84LVLQPAAQLPADD69 pKa = 4.21PLQVSLEE76 pKa = 4.12AGEE79 pKa = 4.62NLDD82 pKa = 5.42PRR84 pKa = 11.84DD85 pKa = 3.89LLNPIMFHH93 pKa = 6.31GAHH96 pKa = 5.75GTDD99 pKa = 3.17INAALNVIYY108 pKa = 10.34KK109 pKa = 10.05KK110 pKa = 10.47QGFNFQTNSTDD121 pKa = 3.78TIDD124 pKa = 4.62LSMFANVEE132 pKa = 4.19GEE134 pKa = 4.29VMDD137 pKa = 4.09SVVVEE142 pKa = 3.86NMYY145 pKa = 11.01YY146 pKa = 10.37SALSDD151 pKa = 3.48PSFRR155 pKa = 11.84KK156 pKa = 10.25YY157 pKa = 10.5GVQEE161 pKa = 4.27VIDD164 pKa = 4.29IGPLVPLVFRR174 pKa = 11.84VNTNMYY180 pKa = 9.66FGPQMSYY187 pKa = 10.75PRR189 pKa = 11.84DD190 pKa = 3.5VFPNVGTSSPNGGFSVSDD208 pKa = 3.42IPSEE212 pKa = 4.13VWNGSSNVSAQTYY225 pKa = 7.22GTDD228 pKa = 3.35MTDD231 pKa = 3.03MQIFTNGVTEE241 pKa = 4.41LSWMPTRR248 pKa = 11.84NAKK251 pKa = 9.75PSSVGTDD258 pKa = 3.53GSPTNTAFVTVPKK271 pKa = 10.12LYY273 pKa = 9.47MGAIIMPPAYY283 pKa = 9.73NQRR286 pKa = 11.84LFYY289 pKa = 10.6RR290 pKa = 11.84CVITHH295 pKa = 6.77SFTFSDD301 pKa = 3.83FGTYY305 pKa = 9.9FDD307 pKa = 4.71GGLNGGSEE315 pKa = 4.57CYY317 pKa = 10.44YY318 pKa = 11.43NNLDD322 pKa = 3.69YY323 pKa = 11.01VAPATMSSGNLDD335 pKa = 3.75SLNLTDD341 pKa = 4.97VEE343 pKa = 4.59GTMRR347 pKa = 11.84TSGVMM352 pKa = 3.2

Molecular weight: 38.71 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A0A1EKX0|A0A0A1EKX0_9VIRU Putative replicase protein OS=Camel associated porprismacovirus 4 OX=2170108 GN=rep PE=4 SV=1
MM1 pKa = 7.1LTIPAKK7 pKa = 10.35RR8 pKa = 11.84GEE10 pKa = 3.85FDD12 pKa = 3.79FYY14 pKa = 11.26HH15 pKa = 6.21WLKK18 pKa = 10.88LFEE21 pKa = 3.97VWNVKK26 pKa = 9.5KK27 pKa = 10.12HH28 pKa = 4.32VVGLEE33 pKa = 3.85EE34 pKa = 4.28GKK36 pKa = 10.26NGYY39 pKa = 8.28KK40 pKa = 9.77HH41 pKa = 4.48WQARR45 pKa = 11.84IQLSGEE51 pKa = 4.06GKK53 pKa = 10.12QIIGGSEE60 pKa = 3.41ISFFQYY66 pKa = 10.06MKK68 pKa = 10.0IYY70 pKa = 9.46YY71 pKa = 8.34PKK73 pKa = 10.66AHH75 pKa = 6.86IEE77 pKa = 4.06EE78 pKa = 5.02ASNTWEE84 pKa = 4.12YY85 pKa = 10.62EE86 pKa = 3.99RR87 pKa = 11.84KK88 pKa = 9.62EE89 pKa = 4.23GKK91 pKa = 9.45FWTSEE96 pKa = 3.78DD97 pKa = 3.63TASILAVRR105 pKa = 11.84FGSLRR110 pKa = 11.84PEE112 pKa = 3.91QKK114 pKa = 10.41KK115 pKa = 9.82ILQILEE121 pKa = 4.21SQGDD125 pKa = 3.72RR126 pKa = 11.84EE127 pKa = 4.01IDD129 pKa = 3.26VWLDD133 pKa = 2.99PSGNHH138 pKa = 5.31GKK140 pKa = 9.4SWLTVHH146 pKa = 6.55LWEE149 pKa = 4.48TGRR152 pKa = 11.84ALVVPRR158 pKa = 11.84SSTTAEE164 pKa = 4.04KK165 pKa = 10.66LSAFICSSWKK175 pKa = 10.52GEE177 pKa = 4.2PIVIIDD183 pKa = 3.9IPRR186 pKa = 11.84STKK189 pKa = 10.16VSGSLLEE196 pKa = 4.23TMEE199 pKa = 4.12EE200 pKa = 4.16LKK202 pKa = 11.09DD203 pKa = 3.59GLVFDD208 pKa = 4.17HH209 pKa = 7.47RR210 pKa = 11.84YY211 pKa = 7.63TGRR214 pKa = 11.84TRR216 pKa = 11.84NVRR219 pKa = 11.84GVKK222 pKa = 10.51VMVFTNSEE230 pKa = 4.15LPLKK234 pKa = 10.42KK235 pKa = 10.14LSKK238 pKa = 10.58DD239 pKa = 2.57RR240 pKa = 11.84WRR242 pKa = 11.84LHH244 pKa = 7.0GIACDD249 pKa = 4.01GSLTT253 pKa = 3.83

Molecular weight: 29.1 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

2

0

2

605

253

352

302.5

33.9

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

4.628 ± 0.414

0.661 ± 0.079

5.124 ± 0.717

5.455 ± 1.985

4.793 ± 0.515

8.43 ± 0.079

2.149 ± 0.62

5.124 ± 0.977

5.289 ± 2.086

7.769 ± 0.81

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

3.306 ± 1.056

4.959 ± 1.584

5.124 ± 1.201

3.471 ± 0.431

4.298 ± 0.999

8.264 ± 0.022

7.438 ± 1.166

7.438 ± 0.682

1.983 ± 1.206

4.298 ± 0.937
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski