Coniochaeta sp. 2T2.1

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Sordariomycetes; Sordariomycetidae; Coniochaetales; Coniochaetaceae; Coniochaeta; unclassified Coniochaeta

Average proteome isoelectric point is 6.55

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 24540 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A5N5LX49|A0A5N5LX49_9PEZI Uncharacterized protein OS=Coniochaeta sp. 2T2.1 OX=1571157 GN=GE09DRAFT_1060439 PE=4 SV=1
MM1 pKa = 7.67KK2 pKa = 9.2FTASLPALFAATVLVLAPALVKK24 pKa = 10.52AWDD27 pKa = 3.74FEE29 pKa = 4.99VYY31 pKa = 10.65DD32 pKa = 4.3EE33 pKa = 5.32DD34 pKa = 5.85CVTSLDD40 pKa = 4.14KK41 pKa = 11.59YY42 pKa = 11.0SGTGDD47 pKa = 3.73VEE49 pKa = 4.7CDD51 pKa = 3.38DD52 pKa = 4.34VVEE55 pKa = 5.07GDD57 pKa = 5.05DD58 pKa = 5.8DD59 pKa = 3.9EE60 pKa = 7.25CEE62 pKa = 4.6DD63 pKa = 4.94GDD65 pKa = 4.84VLDD68 pKa = 5.96DD69 pKa = 3.51YY70 pKa = 11.05TAADD74 pKa = 4.09EE75 pKa = 4.79GRR77 pKa = 11.84DD78 pKa = 3.57ITDD81 pKa = 3.6HH82 pKa = 6.75EE83 pKa = 4.78DD84 pKa = 3.38FRR86 pKa = 11.84SHH88 pKa = 6.97SVHH91 pKa = 6.73CC92 pKa = 4.58

Molecular weight: 10.1 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A5N5MIA1|A0A5N5MIA1_9PEZI Uncharacterized protein OS=Coniochaeta sp. 2T2.1 OX=1571157 GN=GE09DRAFT_140083 PE=4 SV=1
MM1 pKa = 7.69RR2 pKa = 11.84GARR5 pKa = 11.84SSRR8 pKa = 11.84PRR10 pKa = 11.84TAKK13 pKa = 10.51SPPTPARR20 pKa = 11.84ARR22 pKa = 11.84VKK24 pKa = 10.57AKK26 pKa = 10.17LRR28 pKa = 11.84ARR30 pKa = 11.84AKK32 pKa = 9.49RR33 pKa = 11.84AARR36 pKa = 11.84RR37 pKa = 11.84ARR39 pKa = 11.84AKK41 pKa = 9.92VRR43 pKa = 11.84RR44 pKa = 11.84AARR47 pKa = 11.84LLLPASLRR55 pKa = 11.84EE56 pKa = 4.03ARR58 pKa = 11.84ARR60 pKa = 11.84AARR63 pKa = 11.84SNKK66 pKa = 8.77PRR68 pKa = 11.84TARR71 pKa = 11.84SLLQEE76 pKa = 3.8RR77 pKa = 11.84VRR79 pKa = 11.84RR80 pKa = 11.84RR81 pKa = 11.84RR82 pKa = 11.84RR83 pKa = 11.84RR84 pKa = 11.84RR85 pKa = 11.84KK86 pKa = 9.77RR87 pKa = 11.84KK88 pKa = 7.41MTASPTGSRR97 pKa = 11.84TTSPVSTDD105 pKa = 3.28SAPPTPAASSLARR118 pKa = 11.84SLLGWPASRR127 pKa = 11.84PVASAAARR135 pKa = 11.84SAGLSCRR142 pKa = 11.84SRR144 pKa = 11.84SSPRR148 pKa = 11.84LDD150 pKa = 2.73IDD152 pKa = 3.57MVNN155 pKa = 3.15

Molecular weight: 16.99 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

24540

0

24540

11563170

50

7695

471.2

51.88

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.052 ± 0.015

1.261 ± 0.006

5.707 ± 0.012

6.015 ± 0.016

3.598 ± 0.009

7.382 ± 0.015

2.404 ± 0.006

4.438 ± 0.009

4.619 ± 0.015

8.723 ± 0.016

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.147 ± 0.006

3.438 ± 0.009

6.372 ± 0.017

3.882 ± 0.013

6.281 ± 0.013

7.929 ± 0.018

6.132 ± 0.013

6.407 ± 0.012

1.501 ± 0.007

2.711 ± 0.009
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski