Marssonina coronariae

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; sordariomyceta; Leotiomycetes; Helotiales; Dermateaceae; Marssonina

Average proteome isoelectric point is 6.78

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 9355 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A218Z6W4|A0A218Z6W4_9HELO Septin-type G domain-containing protein OS=Marssonina coronariae OX=503106 GN=B2J93_6081 PE=3 SV=1
MM1 pKa = 6.72QTTLTLAALASAAWAFPHH19 pKa = 6.1VARR22 pKa = 11.84DD23 pKa = 3.75APAGCSTSYY32 pKa = 10.89EE33 pKa = 3.92GDD35 pKa = 3.57FQITILNGSSIITKK49 pKa = 9.83RR50 pKa = 11.84DD51 pKa = 3.14LGEE54 pKa = 4.27RR55 pKa = 11.84AASTCGQEE63 pKa = 4.78GYY65 pKa = 8.48LTATLKK71 pKa = 10.93DD72 pKa = 3.51GNLIDD77 pKa = 3.6NKK79 pKa = 10.44GRR81 pKa = 11.84IGSIVANRR89 pKa = 11.84QFQFDD94 pKa = 4.28GPPAQSGAVYY104 pKa = 9.4TNGWSVCSNGSLATSAGSTLFYY126 pKa = 10.37SCKK129 pKa = 10.27SGEE132 pKa = 4.04FANLYY137 pKa = 10.04DD138 pKa = 3.88EE139 pKa = 5.95SVAEE143 pKa = 4.14YY144 pKa = 10.01CLPVYY149 pKa = 10.34IDD151 pKa = 4.7VIPCSSAAATGAVPQQADD169 pKa = 4.03GQPTATTAVAPVTQIADD186 pKa = 3.74GQPQGKK192 pKa = 6.88PTAPAVTQIGDD203 pKa = 3.68GQLQGMPAVTQIADD217 pKa = 3.73GQLQIPTGAPTAITQIADD235 pKa = 3.73GQVQAPATAGAPAATQITDD254 pKa = 3.54GQVQVPTTAAAPATQIGDD272 pKa = 3.66GQVQVPTVAPTAGATQISDD291 pKa = 3.52GQVQVPTAVSGPAVSQIPDD310 pKa = 3.26GQLQSNVSTSATPRR324 pKa = 11.84PIAVSAAVANSPLFVSALGSAALGFAAVILLL355 pKa = 3.96

Molecular weight: 35.47 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A218YX69|A0A218YX69_9HELO Uncharacterized protein OS=Marssonina coronariae OX=503106 GN=B2J93_9443 PE=4 SV=1
MM1 pKa = 7.0PQPRR5 pKa = 11.84RR6 pKa = 11.84RR7 pKa = 11.84LWTLEE12 pKa = 3.86SGSTSKK18 pKa = 11.21VNVRR22 pKa = 11.84ASVKK26 pKa = 9.67VNLRR30 pKa = 11.84ASIKK34 pKa = 9.52VSIRR38 pKa = 11.84ASIKK42 pKa = 8.8VSIRR46 pKa = 11.84ASIKK50 pKa = 9.6VNLTARR56 pKa = 11.84IKK58 pKa = 10.41VNHH61 pKa = 6.26PRR63 pKa = 11.84FF64 pKa = 3.68

Molecular weight: 7.22 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

9355

0

9355

4461638

39

6376

476.9

52.51

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.962 ± 0.023

1.137 ± 0.009

5.474 ± 0.018

6.344 ± 0.028

3.538 ± 0.016

7.196 ± 0.028

2.302 ± 0.011

4.757 ± 0.017

5.002 ± 0.026

8.702 ± 0.03

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.122 ± 0.01

3.522 ± 0.014

6.304 ± 0.028

3.871 ± 0.017

6.392 ± 0.022

8.622 ± 0.036

5.842 ± 0.016

6.011 ± 0.017

1.337 ± 0.008

2.562 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski