Torque teno midi virus 15

Taxonomy: Viruses; Anelloviridae; Gammatorquevirus

Average proteome isoelectric point is 7.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|B6ZK29|B6ZK29_9VIRU Capsid protein OS=Torque teno midi virus 15 OX=2065056 PE=3 SV=1
MM1 pKa = 6.75QHH3 pKa = 6.0YY4 pKa = 7.81PPPKK8 pKa = 9.36LYY10 pKa = 10.5KK11 pKa = 10.15IPFLDD16 pKa = 3.2AWGKK20 pKa = 6.09QQQWISSVEE29 pKa = 4.11SQHH32 pKa = 7.15DD33 pKa = 3.83LWCGCHH39 pKa = 5.72HH40 pKa = 7.25WFAHH44 pKa = 5.72FLDD47 pKa = 4.22SVVPLDD53 pKa = 3.3SRR55 pKa = 11.84NRR57 pKa = 11.84GKK59 pKa = 9.17TIQEE63 pKa = 4.05IIEE66 pKa = 4.19QSTHH70 pKa = 5.2QLRR73 pKa = 11.84ALPALPLKK81 pKa = 9.59PWPGDD86 pKa = 3.36TTGDD90 pKa = 3.53EE91 pKa = 4.46KK92 pKa = 11.46DD93 pKa = 3.53PSEE96 pKa = 4.46DD97 pKa = 3.25AGKK100 pKa = 10.53EE101 pKa = 4.05EE102 pKa = 4.27PQNTEE107 pKa = 3.62NQDD110 pKa = 3.37FTDD113 pKa = 4.0VMPEE117 pKa = 3.98DD118 pKa = 3.94EE119 pKa = 4.46LAEE122 pKa = 4.1ILEE125 pKa = 4.32NAARR129 pKa = 11.84DD130 pKa = 3.85EE131 pKa = 4.27NVPGG135 pKa = 3.84

Molecular weight: 15.46 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|B6ZK29|B6ZK29_9VIRU Capsid protein OS=Torque teno midi virus 15 OX=2065056 PE=3 SV=1
MM1 pKa = 7.48AWRR4 pKa = 11.84YY5 pKa = 5.97YY6 pKa = 8.56WRR8 pKa = 11.84RR9 pKa = 11.84KK10 pKa = 9.27RR11 pKa = 11.84PFRR14 pKa = 11.84RR15 pKa = 11.84RR16 pKa = 11.84WKK18 pKa = 10.42RR19 pKa = 11.84RR20 pKa = 11.84ATKK23 pKa = 9.44YY24 pKa = 10.06RR25 pKa = 11.84KK26 pKa = 7.96PRR28 pKa = 11.84LYY30 pKa = 9.92RR31 pKa = 11.84RR32 pKa = 11.84YY33 pKa = 9.4ARR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84TRR39 pKa = 11.84RR40 pKa = 11.84NPRR43 pKa = 11.84KK44 pKa = 9.15RR45 pKa = 11.84RR46 pKa = 11.84QRR48 pKa = 11.84RR49 pKa = 11.84KK50 pKa = 8.74RR51 pKa = 11.84PRR53 pKa = 11.84VRR55 pKa = 11.84RR56 pKa = 11.84KK57 pKa = 9.95RR58 pKa = 11.84QTLPLKK64 pKa = 9.48QWQPEE69 pKa = 4.26SIRR72 pKa = 11.84RR73 pKa = 11.84CKK75 pKa = 10.37IIGHH79 pKa = 5.37TPIILGCSDD88 pKa = 3.91RR89 pKa = 11.84QIHH92 pKa = 6.93SYY94 pKa = 9.45TYY96 pKa = 7.64WQDD99 pKa = 3.53YY100 pKa = 9.34YY101 pKa = 10.67IHH103 pKa = 6.89PRR105 pKa = 11.84CAAGGGFAVMKK116 pKa = 10.21WSLAYY121 pKa = 10.39LYY123 pKa = 10.82EE124 pKa = 4.36DD125 pKa = 4.1FKK127 pKa = 11.11RR128 pKa = 11.84RR129 pKa = 11.84KK130 pKa = 10.02NIWTKK135 pKa = 9.86SNCMYY140 pKa = 10.68DD141 pKa = 3.59LCRR144 pKa = 11.84YY145 pKa = 7.7TGTKK149 pKa = 9.77LKK151 pKa = 10.26LYY153 pKa = 10.15KK154 pKa = 10.32HH155 pKa = 5.67EE156 pKa = 4.17TVDD159 pKa = 4.55FIVSFSRR166 pKa = 11.84NYY168 pKa = 10.42PMVVDD173 pKa = 4.52EE174 pKa = 4.26NTYY177 pKa = 8.91MHH179 pKa = 6.52THH181 pKa = 6.56PSIMLLKK188 pKa = 9.3KK189 pKa = 9.86HH190 pKa = 6.74RR191 pKa = 11.84IIIPSKK197 pKa = 8.67RR198 pKa = 11.84TNPHH202 pKa = 4.57GKK204 pKa = 8.9NYY206 pKa = 10.62KK207 pKa = 9.93KK208 pKa = 9.4ITVRR212 pKa = 11.84PPRR215 pKa = 11.84QLINKK220 pKa = 8.14WFFQKK225 pKa = 10.64NFNDD229 pKa = 3.08QGLFLLTATAADD241 pKa = 3.76LMYY244 pKa = 10.22PHH246 pKa = 7.58LGPYY250 pKa = 9.49SKK252 pKa = 10.81NRR254 pKa = 11.84LVTITILNTQHH265 pKa = 7.55FYY267 pKa = 10.38QQPNWGTATGDD278 pKa = 3.55YY279 pKa = 11.2SFGTTNFSTWGGAKK293 pKa = 9.58TYY295 pKa = 10.38IDD297 pKa = 4.67NKK299 pKa = 9.38LTDD302 pKa = 4.46YY303 pKa = 10.68NPSMDD308 pKa = 4.16MLKK311 pKa = 10.58QNNKK315 pKa = 9.24HH316 pKa = 5.63NASNGIFNKK325 pKa = 9.73EE326 pKa = 3.98FPNIQYY332 pKa = 8.84WKK334 pKa = 8.81TITNPTHH341 pKa = 6.31PTPTMQVQYY350 pKa = 11.2NPARR354 pKa = 11.84DD355 pKa = 3.43TGNGNKK361 pKa = 9.63VYY363 pKa = 10.32FISTLQTSWAPSTTDD378 pKa = 5.25KK379 pKa = 11.43VMTWTGEE386 pKa = 4.14PLWLQLYY393 pKa = 10.32GLTDD397 pKa = 4.0YY398 pKa = 10.79ILKK401 pKa = 10.8VKK403 pKa = 8.84GTSSALQDD411 pKa = 4.53AICVIEE417 pKa = 4.25SPYY420 pKa = 10.31IEE422 pKa = 4.6PQTHH426 pKa = 5.21NKK428 pKa = 9.74KK429 pKa = 10.31FVFVGNPFMNGLTEE443 pKa = 5.21CGNQPPGWLLSKK455 pKa = 10.2WFLTLEE461 pKa = 4.1DD462 pKa = 3.99QMPILNEE469 pKa = 4.08IIKK472 pKa = 10.22SGPYY476 pKa = 9.34VARR479 pKa = 11.84QDD481 pKa = 3.86GPRR484 pKa = 11.84CTWEE488 pKa = 3.6LHH490 pKa = 5.4CDD492 pKa = 3.22YY493 pKa = 11.09RR494 pKa = 11.84SFFKK498 pKa = 10.3WGGAQPPLQNICDD511 pKa = 3.76PHH513 pKa = 7.56LQEE516 pKa = 4.76TFPVPDD522 pKa = 3.79TVKK525 pKa = 9.29QTIQIIDD532 pKa = 3.74PQKK535 pKa = 10.58QIPEE539 pKa = 4.37TLFHH543 pKa = 5.97SWDD546 pKa = 3.44YY547 pKa = 11.26RR548 pKa = 11.84RR549 pKa = 11.84GLITKK554 pKa = 7.58TALKK558 pKa = 10.42RR559 pKa = 11.84MYY561 pKa = 10.8KK562 pKa = 10.22NISDD566 pKa = 4.49ADD568 pKa = 3.78SSSTDD573 pKa = 3.09GSEE576 pKa = 5.06KK577 pKa = 10.62SDD579 pKa = 3.43TPRR582 pKa = 11.84KK583 pKa = 8.77KK584 pKa = 10.15RR585 pKa = 11.84KK586 pKa = 9.9RR587 pKa = 11.84GDD589 pKa = 3.54PPCPEE594 pKa = 4.28EE595 pKa = 4.27KK596 pKa = 10.4DD597 pKa = 3.34NYY599 pKa = 10.0IIQNLQEE606 pKa = 4.12ICQAPQEE613 pKa = 4.33TSGDD617 pKa = 3.83LEE619 pKa = 4.29QQLHH623 pKa = 5.56NLRR626 pKa = 11.84EE627 pKa = 3.92QQLNKK632 pKa = 10.51NISLLKK638 pKa = 10.1LLAMLKK644 pKa = 9.91QKK646 pKa = 9.98QLQMQLAMGMMEE658 pKa = 4.08

Molecular weight: 77.8 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1329

135

658

332.3

38.68

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

5.117 ± 0.87

1.505 ± 0.177

5.267 ± 0.62

5.342 ± 1.113

3.085 ± 0.382

4.515 ± 0.359

3.386 ± 0.441

5.267 ± 0.439

8.126 ± 0.585

7.449 ± 0.498

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.107 ± 0.433

4.59 ± 0.635

7.976 ± 1.051

6.922 ± 0.289

6.622 ± 0.837

6.02 ± 1.316

7.299 ± 0.61

3.01 ± 0.338

2.784 ± 0.231

3.612 ± 0.833
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski