Fibularhizoctonia sp. CBS 109695

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Agaricomycetes; Agaricomycetidae; Atheliales; Atheliaceae; Fibularhizoctonia; unclassified Fibularhizoctonia

Average proteome isoelectric point is 6.83

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 31941 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A166MQZ6|A0A166MQZ6_9AGAM TFIIIC_sub6 domain-containing protein OS=Fibularhizoctonia sp. CBS 109695 OX=436010 GN=FIBSPDRAFT_735970 PE=4 SV=1
MM1 pKa = 7.56SSKK4 pKa = 8.94QTSSGSGYY12 pKa = 10.9AKK14 pKa = 10.71NSVTGSGSNDD24 pKa = 3.45QGNHH28 pKa = 4.26YY29 pKa = 7.64CTRR32 pKa = 11.84EE33 pKa = 3.84DD34 pKa = 3.37SAGNSGYY41 pKa = 10.53HH42 pKa = 5.64YY43 pKa = 10.5SNKK46 pKa = 10.3DD47 pKa = 2.8GSYY50 pKa = 10.64YY51 pKa = 9.67YY52 pKa = 10.51QNPDD56 pKa = 2.48GSKK59 pKa = 10.19YY60 pKa = 10.54YY61 pKa = 10.23EE62 pKa = 4.03NKK64 pKa = 10.41AGNSKK69 pKa = 8.64YY70 pKa = 9.28TNPRR74 pKa = 11.84GDD76 pKa = 3.7TYY78 pKa = 11.45VKK80 pKa = 10.48SSSATVANDD89 pKa = 3.42HH90 pKa = 7.03GDD92 pKa = 3.42IQDD95 pKa = 4.45DD96 pKa = 3.95RR97 pKa = 11.84NGDD100 pKa = 3.55HH101 pKa = 7.19SSAAAEE107 pKa = 4.54DD108 pKa = 4.72GSDD111 pKa = 3.51GGHH114 pKa = 6.89ASDD117 pKa = 5.28AGHH120 pKa = 5.96SHH122 pKa = 7.49DD123 pKa = 4.95GSSDD127 pKa = 3.74SEE129 pKa = 4.61GSGSRR134 pKa = 11.84PDD136 pKa = 4.19AGQEE140 pKa = 3.99DD141 pKa = 4.8AVDD144 pKa = 4.0DD145 pKa = 4.32TDD147 pKa = 6.22DD148 pKa = 3.97EE149 pKa = 6.04SDD151 pKa = 4.23DD152 pKa = 4.12EE153 pKa = 5.27GSASLPNSDD162 pKa = 4.8EE163 pKa = 4.22EE164 pKa = 5.02GSLDD168 pKa = 4.32SPGGSDD174 pKa = 3.65DD175 pKa = 4.15SEE177 pKa = 4.72SAGEE181 pKa = 3.94SDD183 pKa = 4.51EE184 pKa = 4.61YY185 pKa = 11.63SDD187 pKa = 5.74DD188 pKa = 4.78FEE190 pKa = 7.19DD191 pKa = 4.08EE192 pKa = 4.13

Molecular weight: 19.94 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A167XPE2|A0A167XPE2_9AGAM CHAT domain-containing protein (Fragment) OS=Fibularhizoctonia sp. CBS 109695 OX=436010 GN=FIBSPDRAFT_762943 PE=4 SV=1
MM1 pKa = 7.12GRR3 pKa = 11.84WAGLYY8 pKa = 9.25RR9 pKa = 11.84ARR11 pKa = 11.84IALRR15 pKa = 11.84PGRR18 pKa = 11.84SSQLVRR24 pKa = 11.84RR25 pKa = 11.84PLSAASRR32 pKa = 11.84SRR34 pKa = 11.84FRR36 pKa = 11.84PSLVAAPAAARR47 pKa = 11.84RR48 pKa = 11.84SSPVARR54 pKa = 11.84RR55 pKa = 11.84PSPVARR61 pKa = 11.84RR62 pKa = 11.84SSPVARR68 pKa = 11.84RR69 pKa = 11.84PSPVARR75 pKa = 11.84RR76 pKa = 11.84LSVAARR82 pKa = 11.84RR83 pKa = 11.84RR84 pKa = 11.84AGCWSLRR91 pKa = 11.84RR92 pKa = 11.84PLL94 pKa = 3.77

Molecular weight: 10.4 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

31934

7

31941

10750530

49

5067

336.6

37.06

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.445 ± 0.013

1.522 ± 0.008

5.362 ± 0.011

5.467 ± 0.013

3.623 ± 0.008

6.753 ± 0.014

2.771 ± 0.007

4.959 ± 0.011

4.164 ± 0.013

9.298 ± 0.017

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.199 ± 0.005

3.29 ± 0.008

6.298 ± 0.015

3.69 ± 0.009

6.232 ± 0.012

8.352 ± 0.018

6.089 ± 0.012

6.301 ± 0.011

1.554 ± 0.006

2.628 ± 0.007
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski