Bovine foamy virus

Taxonomy: Viruses; Riboviria; Pararnavirae; Artverviricota; Revtraviricetes; Ortervirales; Retroviridae; Spumaretrovirinae; Bovispumavirus

Average proteome isoelectric point is 6.63

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 5 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|J9VDW6|J9VDW6_9RETR Tas OS=Bovine foamy virus OX=207343 GN=bel1 PE=4 SV=1
MM1 pKa = 7.7ASGGTPEE8 pKa = 4.3KK9 pKa = 10.96ARR11 pKa = 11.84VACRR15 pKa = 11.84RR16 pKa = 11.84VDD18 pKa = 3.69LSSFLAQPDD27 pKa = 4.52DD28 pKa = 4.08YY29 pKa = 10.64PTAADD34 pKa = 3.73SKK36 pKa = 11.1EE37 pKa = 3.96DD38 pKa = 4.39LILKK42 pKa = 7.48LACTTLFSEE51 pKa = 4.5KK52 pKa = 9.52HH53 pKa = 4.38AHH55 pKa = 6.78EE56 pKa = 4.5IYY58 pKa = 10.69EE59 pKa = 4.1NYY61 pKa = 9.97KK62 pKa = 10.36LHH64 pKa = 7.14LKK66 pKa = 10.13RR67 pKa = 11.84DD68 pKa = 3.63EE69 pKa = 4.08LRR71 pKa = 11.84GGKK74 pKa = 8.61EE75 pKa = 3.19WVIIYY80 pKa = 9.72SCKK83 pKa = 9.4HH84 pKa = 6.16CYY86 pKa = 7.86TVFMDD91 pKa = 4.06NSRR94 pKa = 11.84LTLDD98 pKa = 3.18PSGLFRR104 pKa = 11.84VIRR107 pKa = 11.84NKK109 pKa = 10.24KK110 pKa = 8.51GPYY113 pKa = 8.72MLCQMLTRR121 pKa = 11.84HH122 pKa = 5.4LTDD125 pKa = 2.96RR126 pKa = 11.84CNPRR130 pKa = 11.84TKK132 pKa = 10.14PFQSSSSLHH141 pKa = 6.27PNLVTEE147 pKa = 4.86DD148 pKa = 3.51PRR150 pKa = 11.84GAGGGTPGQHH160 pKa = 5.79TLGGDD165 pKa = 2.66QDD167 pKa = 3.8MRR169 pKa = 11.84VNTSGIKK176 pKa = 9.71PLSSLCQCARR186 pKa = 11.84DD187 pKa = 3.97DD188 pKa = 4.73PGRR191 pKa = 11.84SDD193 pKa = 4.31NPLEE197 pKa = 4.12MAEE200 pKa = 4.6PVQPWWTDD208 pKa = 2.79SSLEE212 pKa = 4.03PEE214 pKa = 3.72IATWVLGNPDD224 pKa = 2.66ATARR228 pKa = 11.84FWTGDD233 pKa = 3.4DD234 pKa = 4.47KK235 pKa = 11.78GPQEE239 pKa = 4.33WDD241 pKa = 3.27FDD243 pKa = 4.84DD244 pKa = 6.28DD245 pKa = 4.96LLGPP249 pKa = 4.64

Molecular weight: 27.87 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|J9V9W7|J9V9W7_9RETR Bet OS=Bovine foamy virus OX=207343 GN=bel2 PE=4 SV=1
MM1 pKa = 7.76ALNDD5 pKa = 4.11FDD7 pKa = 6.17PIALQGYY14 pKa = 8.63LPAPRR19 pKa = 11.84VLQHH23 pKa = 6.42NDD25 pKa = 2.94IIICRR30 pKa = 11.84ATSGPWGIGDD40 pKa = 4.22RR41 pKa = 11.84YY42 pKa = 10.43NLIRR46 pKa = 11.84IHH48 pKa = 6.27LQDD51 pKa = 4.15PAGQPLPIPQWEE63 pKa = 4.51PIPNRR68 pKa = 11.84TANPRR73 pKa = 11.84TQPYY77 pKa = 8.94PVVSAPMATLEE88 pKa = 4.33NILNNFHH95 pKa = 6.77IPHH98 pKa = 6.13GVSRR102 pKa = 11.84YY103 pKa = 9.83GPLEE107 pKa = 4.3GGDD110 pKa = 3.88YY111 pKa = 10.88QPGEE115 pKa = 4.16QYY117 pKa = 11.05SQGFCPVTQAEE128 pKa = 4.26IALLNGQHH136 pKa = 6.51LEE138 pKa = 4.08EE139 pKa = 5.54EE140 pKa = 4.21ITILRR145 pKa = 11.84EE146 pKa = 3.5ITHH149 pKa = 7.18RR150 pKa = 11.84LMQGVRR156 pKa = 11.84PPAAPQGPAPPPPPAQPPAPLPAPPVGPPPPAVPAPAPGPMPVPQHH202 pKa = 6.46LPITHH207 pKa = 6.16IRR209 pKa = 11.84AVIGEE214 pKa = 4.3TPANIRR220 pKa = 11.84EE221 pKa = 4.21VPLWLARR228 pKa = 11.84AVPALQGVYY237 pKa = 9.48PVQDD241 pKa = 2.69AVMRR245 pKa = 11.84SRR247 pKa = 11.84TVNALTVRR255 pKa = 11.84HH256 pKa = 6.6PGLALEE262 pKa = 4.36PLEE265 pKa = 4.46CGSWQEE271 pKa = 4.11CLAALWQRR279 pKa = 11.84TFGATALHH287 pKa = 6.59ALGDD291 pKa = 4.0TLGQIANSDD300 pKa = 4.32GIVMAIEE307 pKa = 4.45LGLLFSDD314 pKa = 5.57DD315 pKa = 3.29NWDD318 pKa = 4.02LVWGICRR325 pKa = 11.84RR326 pKa = 11.84FLPGQAVCVAVQARR340 pKa = 11.84LDD342 pKa = 4.08PLPDD346 pKa = 3.22NATRR350 pKa = 11.84IVMISHH356 pKa = 8.19IIRR359 pKa = 11.84DD360 pKa = 3.64VYY362 pKa = 10.98AILGLDD368 pKa = 3.36PLGRR372 pKa = 11.84PMQQTLPRR380 pKa = 11.84RR381 pKa = 11.84NNQPPRR387 pKa = 11.84QQPQRR392 pKa = 11.84RR393 pKa = 11.84QQPRR397 pKa = 11.84RR398 pKa = 11.84TGNQEE403 pKa = 3.16EE404 pKa = 4.05RR405 pKa = 11.84GQRR408 pKa = 11.84NRR410 pKa = 11.84GRR412 pKa = 11.84QNAQTPRR419 pKa = 11.84QEE421 pKa = 4.19GNRR424 pKa = 11.84LQNSQLPGPQDD435 pKa = 3.44YY436 pKa = 10.0PNNSNQPRR444 pKa = 11.84YY445 pKa = 8.98PLRR448 pKa = 11.84PNPQQPQRR456 pKa = 11.84YY457 pKa = 8.09GQEE460 pKa = 3.91QNRR463 pKa = 11.84GNNPNPYY470 pKa = 9.58RR471 pKa = 11.84QPTPGNGNQNRR482 pKa = 11.84NFSRR486 pKa = 11.84GPAPVNEE493 pKa = 4.26QSRR496 pKa = 11.84GRR498 pKa = 11.84GRR500 pKa = 11.84NSQGTNNTGSSAVHH514 pKa = 5.3SVRR517 pKa = 11.84LTSAAPPIPPQDD529 pKa = 3.61AGTPPTPSGNQGQSSS544 pKa = 3.44

Molecular weight: 59.47 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

5

0

5

3338

249

1220

667.6

75.46

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.201 ± 0.746

2.067 ± 0.279

5.153 ± 0.497

5.362 ± 0.523

2.337 ± 0.283

5.992 ± 0.781

2.966 ± 0.23

5.752 ± 0.528

4.823 ± 1.258

9.976 ± 0.882

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.588 ± 0.278

4.643 ± 0.515

8.328 ± 1.78

5.812 ± 0.838

5.692 ± 0.834

5.932 ± 0.691

6.171 ± 0.489

5.213 ± 0.436

2.397 ± 0.331

3.595 ± 0.519
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski