Morchella conica CCBAS932

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; Pezizomycetes; Pezizales; Morchellaceae; Morchella; Morchella conica

Average proteome isoelectric point is 6.74

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 11578 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3N4KT50|A0A3N4KT50_9PEZI Endoplasmic reticulum transmembrane protein OS=Morchella conica CCBAS932 OX=1392247 GN=P167DRAFT_534724 PE=3 SV=1
MM1 pKa = 7.49GNAPIQVVRR10 pKa = 11.84CSALCVHH17 pKa = 6.25EE18 pKa = 4.39TFNDD22 pKa = 3.35EE23 pKa = 6.27DD24 pKa = 3.98EE25 pKa = 6.28DD26 pKa = 4.18EE27 pKa = 6.24DD28 pKa = 4.16EE29 pKa = 6.65DD30 pKa = 4.31EE31 pKa = 6.65DD32 pKa = 4.31EE33 pKa = 6.65DD34 pKa = 4.31EE35 pKa = 6.65DD36 pKa = 4.31EE37 pKa = 6.65DD38 pKa = 4.31EE39 pKa = 6.65DD40 pKa = 4.31EE41 pKa = 6.65DD42 pKa = 4.31EE43 pKa = 6.69DD44 pKa = 4.16EE45 pKa = 6.49DD46 pKa = 4.16EE47 pKa = 6.09DD48 pKa = 3.86EE49 pKa = 5.59GEE51 pKa = 4.46GEE53 pKa = 4.91GEE55 pKa = 4.52GEE57 pKa = 4.03GDD59 pKa = 3.39KK60 pKa = 11.49AGGDD64 pKa = 3.78DD65 pKa = 3.64YY66 pKa = 11.87KK67 pKa = 11.39KK68 pKa = 10.56NCEE71 pKa = 3.63FLLRR75 pKa = 11.84FVSVGPGALPHH86 pKa = 6.37PFSYY90 pKa = 10.88VSSKK94 pKa = 11.16SLDD97 pKa = 3.62PACTNLSTCLGDD109 pKa = 3.46MQHH112 pKa = 6.08NAEE115 pKa = 4.3SEE117 pKa = 4.34VTRR120 pKa = 11.84ICQTSSLVCWNQGPVV135 pKa = 2.85

Molecular weight: 14.81 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3N4LHE4|A0A3N4LHE4_9PEZI Ankyrin OS=Morchella conica CCBAS932 OX=1392247 GN=P167DRAFT_127481 PE=4 SV=1
MM1 pKa = 7.85PLTTRR6 pKa = 11.84RR7 pKa = 11.84AHH9 pKa = 5.92ATRR12 pKa = 11.84STTVARR18 pKa = 11.84KK19 pKa = 8.47PSLMYY24 pKa = 10.81RR25 pKa = 11.84LTHH28 pKa = 6.04PAGTRR33 pKa = 11.84TVGTRR38 pKa = 11.84STAGTRR44 pKa = 11.84ATRR47 pKa = 11.84RR48 pKa = 11.84RR49 pKa = 11.84TKK51 pKa = 9.79ATGPAPVSTHH61 pKa = 4.44RR62 pKa = 11.84RR63 pKa = 11.84ARR65 pKa = 11.84TKK67 pKa = 8.65PTLGARR73 pKa = 11.84IHH75 pKa = 6.54GMAKK79 pKa = 9.81KK80 pKa = 10.38VAGTLTGSRR89 pKa = 11.84TKK91 pKa = 10.35KK92 pKa = 9.47AQGNAMVNGRR102 pKa = 11.84TPGSRR107 pKa = 11.84RR108 pKa = 11.84RR109 pKa = 11.84RR110 pKa = 11.84HH111 pKa = 5.13LL112 pKa = 3.58

Molecular weight: 12.16 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

11577

1

11578

4742244

49

5498

409.6

45.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

8.19 ± 0.024

1.262 ± 0.01

5.329 ± 0.017

6.692 ± 0.029

3.609 ± 0.015

7.155 ± 0.024

2.357 ± 0.009

5.005 ± 0.017

5.222 ± 0.024

8.71 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.217 ± 0.009

3.706 ± 0.015

6.129 ± 0.028

3.636 ± 0.024

6.138 ± 0.02

8.088 ± 0.027

6.184 ± 0.022

6.238 ± 0.017

1.363 ± 0.009

2.766 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski