Kwoniella mangroviensis CBS 10435

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Basidiomycota; Agaricomycotina; Tremellomycetes; Tremellales; Cryptococcaceae; Kwoniella; Kwoniella mangrovensis

Average proteome isoelectric point is 6.42

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 8428 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A1B9IP46|A0A1B9IP46_9TREE Elongator complex protein 5 OS=Kwoniella mangroviensis CBS 10435 OX=1331196 GN=L486_04804 PE=3 SV=1
MM1 pKa = 7.05QLSIIPFLTILSILFPTSSAQLDD24 pKa = 3.8TDD26 pKa = 4.52IICPDD31 pKa = 3.4GSLTEE36 pKa = 4.4YY37 pKa = 8.58LTSMMDD43 pKa = 3.25VLFANGLTTFEE54 pKa = 3.89QLIVHH59 pKa = 6.61WSEE62 pKa = 3.22TDD64 pKa = 2.81MGYY67 pKa = 10.75EE68 pKa = 4.14FLHH71 pKa = 6.74DD72 pKa = 5.3LYY74 pKa = 11.73NSGQKK79 pKa = 8.99LTVLVPTNDD88 pKa = 3.19AFQEE92 pKa = 4.19SGIVSPFEE100 pKa = 4.18GLTEE104 pKa = 4.05DD105 pKa = 3.22WGAEE109 pKa = 3.88LGEE112 pKa = 4.01LHH114 pKa = 7.25LLQGEE119 pKa = 4.25WTYY122 pKa = 11.83DD123 pKa = 3.34QIPQSGHH130 pKa = 5.49AVAATSLLLANEE142 pKa = 4.47LNSTDD147 pKa = 3.58IQPNAYY153 pKa = 9.27QAMVLEE159 pKa = 4.82RR160 pKa = 11.84GNDD163 pKa = 3.42DD164 pKa = 3.61SVVVNGWWGHH174 pKa = 4.69ATSTSGPLDD183 pKa = 3.59LSGSGGLLDD192 pKa = 4.75NLFILPIDD200 pKa = 3.73QVLSFPPSLSTALQAPGLTNMSSALQVIGKK230 pKa = 9.76SSDD233 pKa = 3.43VEE235 pKa = 4.1RR236 pKa = 11.84LSEE239 pKa = 4.11GGFTIFVPLDD249 pKa = 3.72SVWNDD254 pKa = 3.21EE255 pKa = 5.0LKK257 pKa = 10.88DD258 pKa = 3.57IMLDD262 pKa = 3.49GSKK265 pKa = 10.54APEE268 pKa = 3.87MIGNHH273 pKa = 5.15FTTSYY278 pKa = 11.56SLFSPMWIQPSTFEE292 pKa = 4.55LPVEE296 pKa = 4.5SGEE299 pKa = 4.65SLTIQYY305 pKa = 9.53NQDD308 pKa = 2.93GSSSVICGEE317 pKa = 3.97VEE319 pKa = 3.91AQIVRR324 pKa = 11.84SDD326 pKa = 2.88ITLNNGVMHH335 pKa = 7.53IIDD338 pKa = 4.1QILYY342 pKa = 6.48PTSTSSSSDD351 pKa = 3.13SAKK354 pKa = 10.64SNKK357 pKa = 7.87PTTTSSIPSTADD369 pKa = 2.95STSASIPDD377 pKa = 3.92GSDD380 pKa = 2.99SDD382 pKa = 4.24GQGGKK387 pKa = 9.87AAIPDD392 pKa = 3.84APQNSSTSSTVTLSVTLLGCLAVGWLVVYY421 pKa = 8.3VQQ423 pKa = 3.77

Molecular weight: 45.18 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A1B9IT04|A0A1B9IT04_9TREE Uncharacterized protein OS=Kwoniella mangroviensis CBS 10435 OX=1331196 GN=L486_03119 PE=3 SV=1
MM1 pKa = 7.16AQSEE5 pKa = 4.85VTQSLGLAIAQTEE18 pKa = 4.28NLFHH22 pKa = 6.68KK23 pKa = 10.59QADD26 pKa = 4.17LEE28 pKa = 4.3NSLNRR33 pKa = 11.84SLAISEE39 pKa = 4.48RR40 pKa = 11.84SLKK43 pKa = 10.24LANRR47 pKa = 11.84WVSSPSLSLFSGPSSMTLSSLGGVSTQLLIWSLQLIWQIAYY88 pKa = 10.77SMVSAFCFVFILFRR102 pKa = 11.84TGMRR106 pKa = 11.84KK107 pKa = 9.86SMLRR111 pKa = 11.84WSNRR115 pKa = 11.84FYY117 pKa = 10.69HH118 pKa = 6.35IPSDD122 pKa = 3.72EE123 pKa = 4.11EE124 pKa = 4.22SAVTSRR130 pKa = 11.84AKK132 pKa = 10.76DD133 pKa = 3.41FTNITISGITQSPSRR148 pKa = 11.84NRR150 pKa = 11.84QSCNPTANLAPSPEE164 pKa = 4.35VTRR167 pKa = 11.84TPDD170 pKa = 3.1PRR172 pKa = 11.84RR173 pKa = 11.84SNFRR177 pKa = 11.84RR178 pKa = 11.84SASAPLL184 pKa = 3.51

Molecular weight: 20.46 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

8428

0

8428

4204977

50

4993

498.9

55.07

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.228 ± 0.029

0.972 ± 0.01

5.649 ± 0.018

6.465 ± 0.03

3.31 ± 0.015

7.093 ± 0.025

2.306 ± 0.011

5.263 ± 0.018

5.402 ± 0.024

8.765 ± 0.027

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.052 ± 0.009

3.948 ± 0.016

6.554 ± 0.033

3.969 ± 0.021

5.682 ± 0.021

9.63 ± 0.039

6.104 ± 0.018

5.625 ± 0.019

1.344 ± 0.01

2.639 ± 0.014
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski