Torque teno virus 24

Taxonomy: Viruses; Anelloviridae; Alphatorquevirus

Average proteome isoelectric point is 8.06

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 4 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|Q91CY7|Q91CY7_9VIRU ORF4 ORF3 ORF2 ORF1 genes clone: SAa-01 OS=Torque teno virus 24 OX=687363 PE=4 SV=1
MM1 pKa = 7.37SIWRR5 pKa = 11.84PPLGNVSFRR14 pKa = 11.84EE15 pKa = 4.19RR16 pKa = 11.84NWLQACDD23 pKa = 3.54QSHH26 pKa = 6.04ATFCGCGDD34 pKa = 5.13FILHH38 pKa = 6.11LTNLAARR45 pKa = 11.84FALQGPPPPGGPPRR59 pKa = 11.84PRR61 pKa = 11.84PPLLRR66 pKa = 11.84ALPAPEE72 pKa = 3.78VRR74 pKa = 11.84RR75 pKa = 11.84EE76 pKa = 3.85TRR78 pKa = 11.84TEE80 pKa = 3.68NPGASDD86 pKa = 4.18EE87 pKa = 4.29PWPGDD92 pKa = 3.43GGGSDD97 pKa = 3.36AAAGGRR103 pKa = 11.84AAGDD107 pKa = 3.35GGDD110 pKa = 4.44AYY112 pKa = 10.9DD113 pKa = 5.38AGDD116 pKa = 4.83LEE118 pKa = 5.03DD119 pKa = 5.46LFAAVDD125 pKa = 3.77EE126 pKa = 4.62EE127 pKa = 4.46QQQ129 pKa = 3.22

Molecular weight: 13.65 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|Q91CY6|Q91CY6_9VIRU ORF4 ORF3 ORF2 ORF1 genes clone: SAa-01 OS=Torque teno virus 24 OX=687363 PE=4 SV=1
MM1 pKa = 7.54AWRR4 pKa = 11.84WWWQRR9 pKa = 11.84RR10 pKa = 11.84RR11 pKa = 11.84RR12 pKa = 11.84WWPRR16 pKa = 11.84RR17 pKa = 11.84RR18 pKa = 11.84RR19 pKa = 11.84RR20 pKa = 11.84WRR22 pKa = 11.84RR23 pKa = 11.84LRR25 pKa = 11.84RR26 pKa = 11.84RR27 pKa = 11.84RR28 pKa = 11.84PRR30 pKa = 11.84RR31 pKa = 11.84PVRR34 pKa = 11.84RR35 pKa = 11.84RR36 pKa = 11.84RR37 pKa = 11.84RR38 pKa = 11.84RR39 pKa = 11.84ATVRR43 pKa = 11.84RR44 pKa = 11.84RR45 pKa = 11.84RR46 pKa = 11.84WRR48 pKa = 11.84GRR50 pKa = 11.84RR51 pKa = 11.84GRR53 pKa = 11.84RR54 pKa = 11.84TYY56 pKa = 8.33TRR58 pKa = 11.84RR59 pKa = 11.84AVRR62 pKa = 11.84RR63 pKa = 11.84RR64 pKa = 11.84RR65 pKa = 11.84RR66 pKa = 11.84PKK68 pKa = 10.02KK69 pKa = 10.43KK70 pKa = 10.23LVLTQWSPQTVRR82 pKa = 11.84NCTIRR87 pKa = 11.84GIVPMVICGHH97 pKa = 5.32TRR99 pKa = 11.84AGRR102 pKa = 11.84NFAIHH107 pKa = 6.6SEE109 pKa = 4.22DD110 pKa = 3.29FTSQIKK116 pKa = 9.04PHH118 pKa = 6.53GGSFSTTTWSLKK130 pKa = 9.29VCWDD134 pKa = 3.37EE135 pKa = 4.02HH136 pKa = 5.33QKK138 pKa = 10.7FMNRR142 pKa = 11.84WSYY145 pKa = 11.68PNTQLDD151 pKa = 3.68LARR154 pKa = 11.84YY155 pKa = 9.4LGVTFYY161 pKa = 10.48FYY163 pKa = 10.8RR164 pKa = 11.84DD165 pKa = 3.15QKK167 pKa = 9.77TDD169 pKa = 4.12YY170 pKa = 10.19IVQWSRR176 pKa = 11.84NPPFKK181 pKa = 10.62LNKK184 pKa = 9.25YY185 pKa = 8.73SSPMYY190 pKa = 9.82HH191 pKa = 7.45PGMMMQARR199 pKa = 11.84KK200 pKa = 10.27KK201 pKa = 10.87LMVPSFQTRR210 pKa = 11.84PRR212 pKa = 11.84GRR214 pKa = 11.84KK215 pKa = 8.5RR216 pKa = 11.84YY217 pKa = 8.94RR218 pKa = 11.84VRR220 pKa = 11.84IRR222 pKa = 11.84PPNMFADD229 pKa = 3.28KK230 pKa = 10.2WYY232 pKa = 8.44TQEE235 pKa = 4.64DD236 pKa = 4.86LCPVPLVQLVVSAASFMHH254 pKa = 6.59PFCSPLTNNPCITFQVLKK272 pKa = 10.53DD273 pKa = 3.7NYY275 pKa = 9.29YY276 pKa = 10.49SCIGVNSLEE285 pKa = 4.23THH287 pKa = 6.0KK288 pKa = 11.14NSYY291 pKa = 9.09TKK293 pKa = 10.56LQEE296 pKa = 3.82WLYY299 pKa = 9.29KK300 pKa = 10.26TNTFFEE306 pKa = 4.64TTQVIAQLSPSFAPAYY322 pKa = 9.69KK323 pKa = 10.54PNGTNNNTHH332 pKa = 6.46KK333 pKa = 10.12PLGGMVPEE341 pKa = 4.78LKK343 pKa = 10.66YY344 pKa = 11.32NNAGFHH350 pKa = 6.1TGNNPVFGMCKK361 pKa = 9.85YY362 pKa = 10.45KK363 pKa = 10.68PSTLTMQNANKK374 pKa = 9.26WFWEE378 pKa = 3.89NLQVEE383 pKa = 4.65NDD385 pKa = 3.65LQSKK389 pKa = 9.0YY390 pKa = 10.94GKK392 pKa = 10.67ANLTCMEE399 pKa = 4.51YY400 pKa = 8.3HH401 pKa = 5.95TGIYY405 pKa = 10.2SSIFLSPQRR414 pKa = 11.84NLQFPAAYY422 pKa = 10.46LDD424 pKa = 3.5VTYY427 pKa = 11.1NPNCDD432 pKa = 2.98RR433 pKa = 11.84GIGNKK438 pKa = 8.53IWFQYY443 pKa = 6.58STKK446 pKa = 8.33MTTDD450 pKa = 4.47FEE452 pKa = 4.5QKK454 pKa = 9.03QCKK457 pKa = 9.15CVLEE461 pKa = 4.85NIPLWSAFHH470 pKa = 7.03GYY472 pKa = 9.75PDD474 pKa = 5.47FIEE477 pKa = 4.31QEE479 pKa = 4.09LSISAEE485 pKa = 3.51IHH487 pKa = 6.03NFGLVCFICPYY498 pKa = 9.64TFPPCYY504 pKa = 10.25NKK506 pKa = 9.82TKK508 pKa = 10.27PEE510 pKa = 3.86QGYY513 pKa = 8.55VFYY516 pKa = 9.41DD517 pKa = 3.43TTFGNGKK524 pKa = 8.52MPDD527 pKa = 3.68GSGHH531 pKa = 6.5IPIYY535 pKa = 8.8WQQRR539 pKa = 11.84WFIRR543 pKa = 11.84LAFQTQVMHH552 pKa = 6.94DD553 pKa = 4.07LVMCGPFSYY562 pKa = 10.9KK563 pKa = 10.35DD564 pKa = 3.48DD565 pKa = 4.36LANTTITARR574 pKa = 11.84YY575 pKa = 8.8KK576 pKa = 10.79FRR578 pKa = 11.84FKK580 pKa = 10.21WGGNIIPEE588 pKa = 4.09QIIKK592 pKa = 10.16NPCHH596 pKa = 7.07RR597 pKa = 11.84EE598 pKa = 3.67QSLASYY604 pKa = 10.19PDD606 pKa = 3.17RR607 pKa = 11.84QRR609 pKa = 11.84RR610 pKa = 11.84DD611 pKa = 3.57LQVVDD616 pKa = 4.78PSTMGPIYY624 pKa = 10.06TFHH627 pKa = 5.7TWDD630 pKa = 2.87WRR632 pKa = 11.84RR633 pKa = 11.84GLFGTDD639 pKa = 3.43AIQRR643 pKa = 11.84VSQKK647 pKa = 10.43PGDD650 pKa = 3.89ALRR653 pKa = 11.84ITNPFKK659 pKa = 10.62RR660 pKa = 11.84PRR662 pKa = 11.84YY663 pKa = 9.1VPPTDD668 pKa = 3.52RR669 pKa = 11.84EE670 pKa = 4.27DD671 pKa = 3.45YY672 pKa = 10.59RR673 pKa = 11.84QEE675 pKa = 3.6EE676 pKa = 4.36DD677 pKa = 3.59FALQEE682 pKa = 3.92KK683 pKa = 10.1RR684 pKa = 11.84RR685 pKa = 11.84RR686 pKa = 11.84TSTEE690 pKa = 3.39EE691 pKa = 3.98AQDD694 pKa = 3.83EE695 pKa = 4.32EE696 pKa = 5.23SPPQSAPLLQQRR708 pKa = 11.84QQRR711 pKa = 11.84EE712 pKa = 4.04LSVQLAEE719 pKa = 4.19QQRR722 pKa = 11.84LGHH725 pKa = 5.59QLRR728 pKa = 11.84FILQEE733 pKa = 3.91VLKK736 pKa = 8.68TQAGLHH742 pKa = 6.02LNPLLLGPRR751 pKa = 11.84PTRR754 pKa = 11.84SISLSPLEE762 pKa = 4.86DD763 pKa = 3.32SSPP766 pKa = 3.34

Molecular weight: 91.02 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

4

0

4

1452

129

766

363.0

41.32

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

7.231 ± 2.287

1.928 ± 0.233

5.028 ± 0.827

4.408 ± 0.354

4.201 ± 0.604

7.231 ± 1.543

2.135 ± 0.146

2.961 ± 0.786

4.408 ± 0.754

7.231 ± 0.198

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

1.791 ± 0.482

3.994 ± 0.722

9.711 ± 1.787

5.096 ± 1.034

10.468 ± 0.307

6.543 ± 1.519

6.474 ± 0.524

3.512 ± 0.605

2.548 ± 0.396

3.099 ± 0.949
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski