Dissoconium aciculare CBS 342.82

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Fungi; Dikarya; Ascomycota; saccharomyceta; Pezizomycotina; leotiomyceta; dothideomyceta; Dothideomycetes; Dothideomycetidae; Mycosphaerellales; Dissoconiaceae; Dissoconium; Dissoconium aciculare

Average proteome isoelectric point is 6.75

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 10290 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A6J3M3Q1|A0A6J3M3Q1_9PEZI uncharacterized protein OS=Dissoconium aciculare CBS 342.82 OX=1314786 GN=K489DRAFT_380031 PE=4 SV=1
MM1 pKa = 7.6QITQVLSASVVLFAYY16 pKa = 10.08SALSAPTVGLIGIHH30 pKa = 5.63EE31 pKa = 4.58RR32 pKa = 11.84EE33 pKa = 4.19ASDD36 pKa = 4.71ADD38 pKa = 3.54SAYY41 pKa = 10.07TNFARR46 pKa = 11.84SDD48 pKa = 3.01ADD50 pKa = 3.23AAYY53 pKa = 9.6TNFARR58 pKa = 11.84SDD60 pKa = 3.01ADD62 pKa = 3.23AAYY65 pKa = 9.6TNFARR70 pKa = 11.84SDD72 pKa = 3.4ADD74 pKa = 3.46VAYY77 pKa = 10.93SNAARR82 pKa = 11.84SDD84 pKa = 3.35ADD86 pKa = 3.49VAYY89 pKa = 10.93SNAARR94 pKa = 11.84SDD96 pKa = 3.35ADD98 pKa = 3.49VAYY101 pKa = 10.93SNAARR106 pKa = 11.84SDD108 pKa = 3.35ADD110 pKa = 3.49VAYY113 pKa = 10.93SNAARR118 pKa = 11.84SDD120 pKa = 3.28ADD122 pKa = 3.6TAYY125 pKa = 11.33SNAARR130 pKa = 11.84SDD132 pKa = 3.28ADD134 pKa = 3.6TAYY137 pKa = 11.33SNAARR142 pKa = 11.84SDD144 pKa = 3.04ADD146 pKa = 3.24AAYY149 pKa = 9.78TNFARR154 pKa = 11.84EE155 pKa = 4.03ASDD158 pKa = 4.94ADD160 pKa = 3.22IAYY163 pKa = 10.85SNAAHH168 pKa = 6.94AA169 pKa = 4.81

Molecular weight: 17.54 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A6J3M5J3|A0A6J3M5J3_9PEZI Protein YIP OS=Dissoconium aciculare CBS 342.82 OX=1314786 GN=K489DRAFT_379318 PE=3 SV=1
MM1 pKa = 7.88PSHH4 pKa = 6.91KK5 pKa = 10.39SFRR8 pKa = 11.84TKK10 pKa = 10.45QKK12 pKa = 9.84LAKK15 pKa = 9.55AQKK18 pKa = 8.59QNRR21 pKa = 11.84PIPQWIRR28 pKa = 11.84LRR30 pKa = 11.84TGNTIRR36 pKa = 11.84YY37 pKa = 5.79NAKK40 pKa = 8.89RR41 pKa = 11.84RR42 pKa = 11.84HH43 pKa = 4.15WRR45 pKa = 11.84KK46 pKa = 7.38TRR48 pKa = 11.84IGII51 pKa = 4.0

Molecular weight: 6.25 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

10289

1

10290

4500263

50

4912

437.3

48.31

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

9.273 ± 0.025

1.292 ± 0.01

5.769 ± 0.018

5.909 ± 0.024

3.585 ± 0.014

6.688 ± 0.022

2.555 ± 0.011

4.827 ± 0.016

4.558 ± 0.022

8.841 ± 0.029

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.097 ± 0.008

3.61 ± 0.013

5.869 ± 0.024

4.169 ± 0.022

6.527 ± 0.022

8.377 ± 0.029

6.057 ± 0.019

5.995 ± 0.016

1.389 ± 0.01

2.61 ± 0.013
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski