Labrus bergylta (ballan wrasse)

Taxonomy: cellular organisms; Eukaryota; Opisthokonta; Metazoa; Eumetazoa; Bilateria; Deuterostomia; Chordata; Craniata; Vertebrata; Gnathostomata; Teleostomi; Euteleostomi; Actinopterygii; Actinopteri; Neopterygii; Teleostei; Osteoglossocephalai; Clupeocephala; Euteleosteomorpha; Neoteleostei; Eurypterygia; Ctenosquamata; Acanthomorphata;

Average proteome isoelectric point is 6.57

Get precalculated fractions of proteins

Acidic
pI < 6.8
6.8-7.4
pI > 7.4
Basic
    
All



Virtual 2D-PAGE plot for 37793 proteins (isoelectric point calculated using IPC2_protein)

Get csv file with sequences according to given criteria:
        -     Method 

     -  kDa    
                                                                                      

* You can choose from 21 different methods for calculating isoelectric point

Summary statistics related to proteome-wise predictions


    
Protein with the lowest isoelectric point:
>tr|A0A3Q3FBZ3|A0A3Q3FBZ3_9LABR Dual-specificity kinase OS=Labrus bergylta OX=56723 PE=3 SV=1
MM1 pKa = 7.37VLLKK5 pKa = 10.65SLNPPTEE12 pKa = 4.35GVRR15 pKa = 11.84HH16 pKa = 5.28EE17 pKa = 4.28QAEE20 pKa = 4.53TTAVMGGQRR29 pKa = 11.84LGCGTLYY36 pKa = 10.64VAEE39 pKa = 4.69TRR41 pKa = 11.84LSWFDD46 pKa = 3.26GAGLGFCLEE55 pKa = 4.24YY56 pKa = 9.14PTIGLHH62 pKa = 6.67AISRR66 pKa = 11.84DD67 pKa = 3.15VSAYY71 pKa = 8.46PQEE74 pKa = 4.28HH75 pKa = 7.06LYY77 pKa = 11.6VMVNGKK83 pKa = 9.81VGDD86 pKa = 3.92EE87 pKa = 4.34NDD89 pKa = 3.18AEE91 pKa = 4.37MAEE94 pKa = 4.3KK95 pKa = 10.41AADD98 pKa = 3.81EE99 pKa = 5.86DD100 pKa = 4.18EE101 pKa = 6.12DD102 pKa = 5.61DD103 pKa = 5.77DD104 pKa = 4.95NSCSSSGGDD113 pKa = 3.62DD114 pKa = 4.25DD115 pKa = 5.24EE116 pKa = 5.55EE117 pKa = 4.48GTITEE122 pKa = 4.03IRR124 pKa = 11.84FVPSDD129 pKa = 3.45KK130 pKa = 11.05AALEE134 pKa = 4.1PMFSAMCEE142 pKa = 4.24CQALHH147 pKa = 7.42PDD149 pKa = 4.21PEE151 pKa = 6.72DD152 pKa = 4.81DD153 pKa = 5.87DD154 pKa = 4.92SDD156 pKa = 3.91NDD158 pKa = 4.08FEE160 pKa = 4.91GEE162 pKa = 4.09EE163 pKa = 4.31YY164 pKa = 10.54DD165 pKa = 4.73VEE167 pKa = 4.32EE168 pKa = 4.87ADD170 pKa = 4.21PEE172 pKa = 4.56HH173 pKa = 6.32GHH175 pKa = 6.69GDD177 pKa = 2.8IPTFYY182 pKa = 10.1TCDD185 pKa = 3.45EE186 pKa = 4.52GLSSLTQEE194 pKa = 4.36GQATLEE200 pKa = 4.09RR201 pKa = 11.84LEE203 pKa = 4.74GMLAQSVAHH212 pKa = 5.87QYY214 pKa = 11.26NMAGVRR220 pKa = 11.84TAEE223 pKa = 4.22TNNEE227 pKa = 4.07FEE229 pKa = 5.98DD230 pKa = 4.18GMEE233 pKa = 3.74VDD235 pKa = 4.04AAAMEE240 pKa = 4.63AGQFEE245 pKa = 4.63DD246 pKa = 5.03ADD248 pKa = 3.96VEE250 pKa = 4.5HH251 pKa = 7.13

Molecular weight: 27.29 kDa
Isoelectric point according different methods:





Protein with the highest isoelectric point:
>tr|A0A3Q3M3U4|A0A3Q3M3U4_9LABR Peptidase S1 domain-containing protein OS=Labrus bergylta OX=56723 PE=4 SV=1
WW1 pKa = 6.94SRR3 pKa = 11.84SISLSWSRR11 pKa = 11.84SISLSWSRR19 pKa = 11.84SISLSWSRR27 pKa = 11.84SLSLPWSRR35 pKa = 11.84SISLSWSRR43 pKa = 11.84SISLPWSRR51 pKa = 11.84SVSLSWSRR59 pKa = 11.84SVSLSWSRR67 pKa = 11.84SISLPWSRR75 pKa = 11.84SISLPWSRR83 pKa = 11.84SVSLPWSRR91 pKa = 11.84SISLPWSRR99 pKa = 11.84SISLPWSRR107 pKa = 11.84SISLPWSRR115 pKa = 11.84SISLPWSRR123 pKa = 11.84SVSLPWSRR131 pKa = 11.84SISLPWSRR139 pKa = 11.84SISLPWSRR147 pKa = 11.84SISLPWSRR155 pKa = 11.84SISLPWSRR163 pKa = 11.84SISLPWSRR171 pKa = 11.84SISLPWSRR179 pKa = 11.84SISLPWSRR187 pKa = 11.84SISLPWSRR195 pKa = 11.84SLSLPWSRR203 pKa = 11.84SLSLPWSRR211 pKa = 11.84SLSLPWSRR219 pKa = 11.84SISLPWSRR227 pKa = 11.84SISLPWSRR235 pKa = 11.84SISLPWSRR243 pKa = 11.84SISLPWSRR251 pKa = 11.84SISLPWSRR259 pKa = 11.84SISLPWSRR267 pKa = 11.84SVSLPWSRR275 pKa = 11.84SVSLPWSRR283 pKa = 11.84SVSLPWSRR291 pKa = 11.84SISLPWSRR299 pKa = 11.84SISLPWSRR307 pKa = 11.84SVSLPWSRR315 pKa = 11.84SISLPWSRR323 pKa = 11.84SISLPWSRR331 pKa = 11.84SISLPWSRR339 pKa = 11.84SVSLPWSRR347 pKa = 11.84SVSLPWSRR355 pKa = 11.84SLSLPWSRR363 pKa = 11.84SISLPWSRR371 pKa = 11.84SISLPWSRR379 pKa = 11.84SVSLPWSRR387 pKa = 11.84SISLPWSRR395 pKa = 11.84SLSLPWSRR403 pKa = 11.84SLSLPWSRR411 pKa = 11.84SVSLPWSRR419 pKa = 11.84SVSLPWSRR427 pKa = 11.84SISLPWSRR435 pKa = 11.84SLSLPWSRR443 pKa = 11.84SVSLPWSRR451 pKa = 11.84SISLPWSRR459 pKa = 11.84SLSLPWSRR467 pKa = 11.84SVSLPCAPSEE477 pKa = 4.2RR478 pKa = 11.84EE479 pKa = 3.93AGRR482 pKa = 11.84LTLGLHH488 pKa = 5.03SVQRR492 pKa = 11.84VVSSGLRR499 pKa = 11.84WNII502 pKa = 3.28

Molecular weight: 57.72 kDa
Isoelectric point according different methods:





Peptides (in silico digests for buttom-up proteomics)

Below you can find in silico digests of the whole proteome with Trypsin, Chymotrypsin, Trypsin+LysC, LysN, ArgC proteases suitable for different mass spec machines.

Try
ESI
ChTry
ESI
ArgC
ESI
LysN
ESI
TryLysC
ESI

Try
MALDI
ChTry
MALDI
ArgC
MALDI
LysN
MALDI
TryLysC
MALDI

Try
LTQ
ChTry
LTQ
ArgC
LTQ
LysN
LTQ
TryLysC
LTQ

Try
MSlow
ChTry
MSlow
ArgC
MSlow
LysN
MSlow
TryLysC
MSlow

Try
MShigh
ChTry
MShigh
ArgC
MShigh
LysN
MShigh
TryLysC
MShigh

General Statistics

Number of major isoforms

Number of additional isoforms

Number of all proteins

Number of amino acids

Min. Seq. Length

Max. Seq. Length

Avg. Seq. Length

Avg. Mol. Weight

26930

10863

37793

19526510

15

8657

516.7

57.76

Amino acid frequency

Ala

Cys

Asp

Glu

Phe

Gly

His

Ile

Lys

Leu

6.325 ± 0.011

2.364 ± 0.012

5.199 ± 0.009

6.765 ± 0.016

3.748 ± 0.01

6.24 ± 0.014

2.697 ± 0.008

4.415 ± 0.01

5.639 ± 0.014

9.635 ± 0.017

Met

Asn

Gln

Pro

Arg

Ser

Thr

Val

Trp

Tyr

2.399 ± 0.006

3.89 ± 0.008

5.544 ± 0.016

4.671 ± 0.014

5.599 ± 0.011

8.772 ± 0.015

5.726 ± 0.011

6.418 ± 0.012

1.174 ± 0.004

2.779 ± 0.008
Note: For amino acid frequency statistics the error has been estimated with the bootstraping (x100) at the protein level

Most of the basic statistics you can see at this page can be downloaded from this CSV file

For dipeptide frequency statistics click here
See this proteome in: uniprot_link
Proteome-pI is available under Creative Commons Attribution-NoDerivs license, for more details see here

Reference: Kozlowski LP. Proteome-pI 2.0: Proteome Isoelectric Point Database Update. Nucleic Acids Res. 2021, doi: 10.1093/nar/gkab944 Contact: Lukasz P. Kozlowski